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The map label for this gene is rimK [H]

Identifier: 145299768

GI number: 145299768

Start: 3067789

End: 3068418

Strand: Direct

Name: rimK [H]

Synonym: ASA_2848

Alternate gene names: 145299768

Gene position: 3067789-3068418 (Clockwise)

Preceding gene: 145299767

Following gene: 145299769

Centisome position: 65.24

GC content: 57.3

Gene sequence:

>630_bases
ATGGAACAGCAACAGAAGCAGTATGTGCAGCAACAGCATCTGCTGGTTCAGCTCAACACTGATGTCAACAACATGAAAGA
GTCTGTGAAAAAAGTCGATAGCAAGCTCGAAGCCTTGCCACCCGAGCCGCCCAAACCCATGGCGATCCCGACCGAGAAAT
GCCAGGCACCAAGCCAGGGCCATACCGTCGACGGCAAACTGCTGGTGGGTGAAGCCGAGTGGATCTGGGTTGACGCCGCC
AATGACGCCTTCCAGGCGCGGGTCGATACCGGTGCCACCACCTCCTCCATCAGCGCCCAGGACATCACCATCTTCGAGCG
CAATGGCAAAAACTGGGTGCGCTTCTTCCTGAGCCACCAGGAGATGGACGACAAGATCCAGATCGAAGCGCCGCTGGTAC
GCCACGTGCGGGTGCGTCAGGCGTCTGCCGACGATCTCGACCGTCGTCCCGTGGTACGTCTGGCGGTGCGGATCGGCGAC
ATGACCGAGAAGGCCGAATTTACCCTGAAAGATCGCAGCGACATGACCTTCCCCGTGTTGCTGGGTCGCGAATTTTTGAA
AGACATCGCCGTGGTTGATGTGGCCCGCGAATATATCCAACCAAAACCCAAGCTCAAGGATGTGAAATAA

Upstream 100 bases:

>100_bases
CGGGTGTGTCAGTGTGGATAAAGCGCCCCCGGTACCAACCTTGACGCTGGCCGAGCTTCGCACCGAGATCAATCTGAGCG
AGCAACGCCTGCAAACATCC

Downstream 100 bases:

>100_bases
TCCATGGTTTCCCGTAAGCCGTTCTATTTGCTGGTCGCCCTGCTGTTCATTGTCGGCCTGGGGATGACGTTTTATCACCA
CATAGCGTTGGATGTACCGC

Product: ATP-dependent Zn protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MEQQQKQYVQQQHLLVQLNTDVNNMKESVKKVDSKLEALPPEPPKPMAIPTEKCQAPSQGHTVDGKLLVGEAEWIWVDAA
NDAFQARVDTGATTSSISAQDITIFERNGKNWVRFFLSHQEMDDKIQIEAPLVRHVRVRQASADDLDRRPVVRLAVRIGD
MTEKAEFTLKDRSDMTFPVLLGREFLKDIAVVDVAREYIQPKPKLKDVK

Sequences:

>Translated_209_residues
MEQQQKQYVQQQHLLVQLNTDVNNMKESVKKVDSKLEALPPEPPKPMAIPTEKCQAPSQGHTVDGKLLVGEAEWIWVDAA
NDAFQARVDTGATTSSISAQDITIFERNGKNWVRFFLSHQEMDDKIQIEAPLVRHVRVRQASADDLDRRPVVRLAVRIGD
MTEKAEFTLKDRSDMTFPVLLGREFLKDIAVVDVAREYIQPKPKLKDVK
>Mature_209_residues
MEQQQKQYVQQQHLLVQLNTDVNNMKESVKKVDSKLEALPPEPPKPMAIPTEKCQAPSQGHTVDGKLLVGEAEWIWVDAA
NDAFQARVDTGATTSSISAQDITIFERNGKNWVRFFLSHQEMDDKIQIEAPLVRHVRVRQASADDLDRRPVVRLAVRIGD
MTEKAEFTLKDRSDMTFPVLLGREFLKDIAVVDVAREYIQPKPKLKDVK

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 23787; Mature: 23787

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQQKQYVQQQHLLVQLNTDVNNMKESVKKVDSKLEALPPEPPKPMAIPTEKCQAPSQG
CCHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC
HTVDGKLLVGEAEWIWVDAANDAFQARVDTGATTSSISAQDITIFERNGKNWVRFFLSHQ
CCCCCEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHC
EMDDKIQIEAPLVRHVRVRQASADDLDRRPVVRLAVRIGDMTEKAEFTLKDRSDMTFPVL
CCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHH
LGREFLKDIAVVDVAREYIQPKPKLKDVK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEQQQKQYVQQQHLLVQLNTDVNNMKESVKKVDSKLEALPPEPPKPMAIPTEKCQAPSQG
CCHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCC
HTVDGKLLVGEAEWIWVDAANDAFQARVDTGATTSSISAQDITIFERNGKNWVRFFLSHQ
CCCCCEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHC
EMDDKIQIEAPLVRHVRVRQASADDLDRRPVVRLAVRIGDMTEKAEFTLKDRSDMTFPVL
CCCCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHH
LGREFLKDIAVVDVAREYIQPKPKLKDVK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA