Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is pcaK [H]
Identifier: 145297060
GI number: 145297060
Start: 3279576
End: 3280937
Strand: Reverse
Name: pcaK [H]
Synonym: cgR_2956
Alternate gene names: 145297060
Gene position: 3280937-3279576 (Counterclockwise)
Preceding gene: 145297061
Following gene: 145297059
Centisome position: 99.0
GC content: 52.72
Gene sequence:
>1362_bases GTGACCGTGACAATTAACCAATCGGTTAGAGGACCAGAGCAAATTCTTGCTGAGGTTCGCTCCAACAAAATGTCTAAGTT CCAAATCGTTACCGTGACCATTGCCTTGCTGATGGTGGTCCTCGACGGTTTCGAAGTGGGCATCATGGCATTCGCAGCAC CACAAATCCAAGAACAACTAGGAATCAGCCCAGACATCCTGGGCTATGTACTCAGCGGCAGCCTCTTTGGTATGGCCATC GGCTCTATCTTCCTCACTCCCCTCGCTGACCGTTTTGGTCGCCGACCCCTCACCTTGGCAATGCTCACACTCATCGTTGT GGGCATGGCGCTAACGTTGACGGCACCCACAGCACTCTGGCTCATCGTCTGGCGCATCGTCACCGGTTTAGGCATCGGTG GAATGATGGCAAACCTCAATGCACTTGTTGCGGAGTACTCCTCTGATAAACGACGCACCACAGCGATTGCTATTTACGCA GCCGGCTACCCTATCGGAGCTACAGTTGCTGGATTCATTGCTAGGCCACTAATTCCACAATATGGATGGCATTCCATGTT TATCGCTGGAACCATCCTGGCTGTTGTTGCACTCATCGGCGCTTTTGCTTTGCTTCCAGAATCCTTGGATTATCTGCTGG GTCGTCGACCAAACCGTGCCCTTGACCGTGTCAACAAGATTTTGGGCAAGATGAATGTTGCTCCACTAGACGCACTGCCA GAACGCACAAATACTGAAGAAGACCGCGTAAGCACTAAAAACACCATCCGCGAAGTTCTTTCCCCACCAACCCTTCGCCT GACCATGGCATTGTGGCTTGGCTACGCACTCCTTGTTGCCGCATACTACTTTGCTAATACCTGGATCCCCACCATCTTGA CCAATGTCAGTGGTGACCCACAACTTGGAACCACAATGGGTATTGGCGCAAACCTCGGTGGCGTGTTGGGCTGCTTCGTA TTCGCAGCTCTTGCCATCCGATTCAGCGGACGCCACCTGCTCTTTATCACCTTGTTTGCCGCAGCCGCCGCATACATCAT CTTCGGTATGGTCTTCAGCATTATCCCCGTTGCCATCATGGTTGGTTTCGTCCTCGGAGTGCTCACCACCGGTGCTATTG CAGGTTTCTACGCTGTCGCACCAACCATCTACTCCTCAAAGGCACGCGCTACCGGCATCGGTTGGATGATCGGCATCGGA CGTCTGGTCTCTGTGGCAGCACCCATCATCGTTGGATACATCCTCGCCGCAGGTGCAGAACCAGAAAAGGTATTCCTGTA CTTCTCTATCCCGTTGATCATCGCAGGTGTTGCTGCACTGACTCTTTTGCTTGGCCGTACTAAAGCAACACTCGCTGGCT AA
Upstream 100 bases:
>100_bases TGATAAGTAAATGCAATCCGGATCACAGTCTGTTTATGATGCTACTCACATTGTTTGGTAGGTGGAAGTTAACTCATAGA CGAAAGATCAGGAGGTCACC
Downstream 100 bases:
>100_bases AACTACTTTTAAATTTTTTTTACGGAGGTCACTCATGTCAACCGCCTTTGCCCCTGAATCACCGGAAGCAACCATCACCT GGAACCCCACACCAGAACAA
Product: hypothetical protein
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MTVTINQSVRGPEQILAEVRSNKMSKFQIVTVTIALLMVVLDGFEVGIMAFAAPQIQEQLGISPDILGYVLSGSLFGMAI GSIFLTPLADRFGRRPLTLAMLTLIVVGMALTLTAPTALWLIVWRIVTGLGIGGMMANLNALVAEYSSDKRRTTAIAIYA AGYPIGATVAGFIARPLIPQYGWHSMFIAGTILAVVALIGAFALLPESLDYLLGRRPNRALDRVNKILGKMNVAPLDALP ERTNTEEDRVSTKNTIREVLSPPTLRLTMALWLGYALLVAAYYFANTWIPTILTNVSGDPQLGTTMGIGANLGGVLGCFV FAALAIRFSGRHLLFITLFAAAAAYIIFGMVFSIIPVAIMVGFVLGVLTTGAIAGFYAVAPTIYSSKARATGIGWMIGIG RLVSVAAPIIVGYILAAGAEPEKVFLYFSIPLIIAGVAALTLLLGRTKATLAG
Sequences:
>Translated_453_residues MTVTINQSVRGPEQILAEVRSNKMSKFQIVTVTIALLMVVLDGFEVGIMAFAAPQIQEQLGISPDILGYVLSGSLFGMAI GSIFLTPLADRFGRRPLTLAMLTLIVVGMALTLTAPTALWLIVWRIVTGLGIGGMMANLNALVAEYSSDKRRTTAIAIYA AGYPIGATVAGFIARPLIPQYGWHSMFIAGTILAVVALIGAFALLPESLDYLLGRRPNRALDRVNKILGKMNVAPLDALP ERTNTEEDRVSTKNTIREVLSPPTLRLTMALWLGYALLVAAYYFANTWIPTILTNVSGDPQLGTTMGIGANLGGVLGCFV FAALAIRFSGRHLLFITLFAAAAAYIIFGMVFSIIPVAIMVGFVLGVLTTGAIAGFYAVAPTIYSSKARATGIGWMIGIG RLVSVAAPIIVGYILAAGAEPEKVFLYFSIPLIIAGVAALTLLLGRTKATLAG >Mature_452_residues TVTINQSVRGPEQILAEVRSNKMSKFQIVTVTIALLMVVLDGFEVGIMAFAAPQIQEQLGISPDILGYVLSGSLFGMAIG SIFLTPLADRFGRRPLTLAMLTLIVVGMALTLTAPTALWLIVWRIVTGLGIGGMMANLNALVAEYSSDKRRTTAIAIYAA GYPIGATVAGFIARPLIPQYGWHSMFIAGTILAVVALIGAFALLPESLDYLLGRRPNRALDRVNKILGKMNVAPLDALPE RTNTEEDRVSTKNTIREVLSPPTLRLTMALWLGYALLVAAYYFANTWIPTILTNVSGDPQLGTTMGIGANLGGVLGCFVF AALAIRFSGRHLLFITLFAAAAAYIIFGMVFSIIPVAIMVGFVLGVLTTGAIAGFYAVAPTIYSSKARATGIGWMIGIGR LVSVAAPIIVGYILAAGAEPEKVFLYFSIPLIIAGVAALTLLLGRTKATLAG
Specific function: Transporter for 4-hydroxybenzoate. Also required for chemotaxis to aromatic acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI213021148, Length=477, Percent_Identity=23.4800838574423, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI24308167, Length=423, Percent_Identity=23.1678486997636, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI87081723, Length=426, Percent_Identity=24.6478873239437, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1786229, Length=378, Percent_Identity=24.8677248677249, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI87082404, Length=387, Percent_Identity=24.5478036175711, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082231, Length=206, Percent_Identity=27.1844660194175, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI87082159, Length=399, Percent_Identity=21.8045112781955, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI32564663, Length=435, Percent_Identity=25.2873563218391, Blast_Score=88, Evalue=8e-18, Organism=Drosophila melanogaster, GI19922874, Length=243, Percent_Identity=23.8683127572016, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48042; Mature: 47911
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTINQSVRGPEQILAEVRSNKMSKFQIVTVTIALLMVVLDGFEVGIMAFAAPQIQEQL CEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHH GISPDILGYVLSGSLFGMAIGSIFLTPLADRFGRRPLTLAMLTLIVVGMALTLTAPTALW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LIVWRIVTGLGIGGMMANLNALVAEYSSDKRRTTAIAIYAAGYPIGATVAGFIARPLIPQ HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCC YGWHSMFIAGTILAVVALIGAFALLPESLDYLLGRRPNRALDRVNKILGKMNVAPLDALP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC ERTNTEEDRVSTKNTIREVLSPPTLRLTMALWLGYALLVAAYYFANTWIPTILTNVSGDP CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QLGTTMGIGANLGGVLGCFVFAALAIRFSGRHLLFITLFAAAAAYIIFGMVFSIIPVAIM CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGFVLGVLTTGAIAGFYAVAPTIYSSKARATGIGWMIGIGRLVSVAAPIIVGYILAAGAE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PEKVFLYFSIPLIIAGVAALTLLLGRTKATLAG CCEEEEEEEHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure TVTINQSVRGPEQILAEVRSNKMSKFQIVTVTIALLMVVLDGFEVGIMAFAAPQIQEQL EEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHH GISPDILGYVLSGSLFGMAIGSIFLTPLADRFGRRPLTLAMLTLIVVGMALTLTAPTALW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LIVWRIVTGLGIGGMMANLNALVAEYSSDKRRTTAIAIYAAGYPIGATVAGFIARPLIPQ HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCC YGWHSMFIAGTILAVVALIGAFALLPESLDYLLGRRPNRALDRVNKILGKMNVAPLDALP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC ERTNTEEDRVSTKNTIREVLSPPTLRLTMALWLGYALLVAAYYFANTWIPTILTNVSGDP CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QLGTTMGIGANLGGVLGCFVFAALAIRFSGRHLLFITLFAAAAAYIIFGMVFSIIPVAIM CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGFVLGVLTTGAIAGFYAVAPTIYSSKARATGIGWMIGIGRLVSVAAPIIVGYILAAGAE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC PEKVFLYFSIPLIIAGVAALTLLLGRTKATLAG CCEEEEEEEHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961399 [H]