Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145296488
Identifier: 145296488
GI number: 145296488
Start: 2636744
End: 2637709
Strand: Direct
Name: 145296488
Synonym: cgR_2399
Alternate gene names: NA
Gene position: 2636744-2637709 (Clockwise)
Preceding gene: 145296487
Following gene: 145296489
Centisome position: 79.56
GC content: 58.18
Gene sequence:
>966_bases ATGGCCGCGATGACCAACCTCCCACACCTACGCGCCATCCAAGAACGCTACTACTTCCTGAGCATCCGCTACCTCGCCTC CATCATGATCGCCGTGGCCAAAGCAGACCCCACCCTGTGGGAAGAACTCGACCTGCGCATCACCGACGCCTTAACCCCAG TCACCGACGGGGAAGTGATGATCCAGTCCTCCACCCTGTCCAAACGCATCGCCGCCTGGATCAAAGAACTCGACCCCGAA CCCACACCAGAGCCCACACCAGCCAAGGACTATGTTCAGGTCACCACCACCGATGAGGCGACCTATGTCCGCATCAAAAT CAGCGGCCCCAACCGCCTGCTCCTCAATGACATCATCACCCAACTCAAAGACACAGACACCGAGGACAGCCTGCCTGAAG CGCTCATGGCCTTCCTGATGGAGAAAATCCAGTTAAAGATCACCAAGTACCTTTTCACCCCGCACAATCACCCCGATCAG GCATGGTCACCGGACTACGGTGACATTGATCCCGAAGCCTATGCCAACGCCACCCTCGTGTGCGCCAAGGACTTAGATGA GGTCGCTGGAGCCACGGAGAAGAGCTACACCCCGAGTGAGAAGATGAAAGCACTGATCAGAGCTCGGGATGGGCATTGCC GCTTCCCAGGGTGTTGCGTCCCGGCGAGTAAATGCCAGGTCGATCACATTATCCCGTGGGCGGAGGGCGGCCCGACAGCG GCGTGGAACCTGCAGTTGTTGTGCCAGCGGCATCACAATATGAAAACCGATGGTCGCTTTACTGCTGATGCTAATGGATT GGCGGAGATTAGATGGATTGGGCCGATGGATGTACCAGCGGTGACCAGGCCGACGGGTCCGTTGGTGAAAGCGATGCCGC GGGGGATTTGGGGTCAGGTGTTGAGGGATCGGATCCAGGCTAGGTTTGAGCGGATCCGCGACCGCGCCCTCAACAAAGAA GACTAG
Upstream 100 bases:
>100_bases CACCACCGACTCCGACGACTTCGACGCCGACTCCTTTACCACCGAAGTCATCCGGATTACCGGCTACTCCCGCCACGAAG TCAACAACGGCCTTAACGCC
Downstream 100 bases:
>100_bases AAGCGCACAGGTTTTTGCATGGCTAGACTTTGAATGAGTAAGCACGAACACATTTCAAAGGAAGGGTTTCACCATGGCAC GCGCACTCATTCTGGTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MAAMTNLPHLRAIQERYYFLSIRYLASIMIAVAKADPTLWEELDLRITDALTPVTDGEVMIQSSTLSKRIAAWIKELDPE PTPEPTPAKDYVQVTTTDEATYVRIKISGPNRLLLNDIITQLKDTDTEDSLPEALMAFLMEKIQLKITKYLFTPHNHPDQ AWSPDYGDIDPEAYANATLVCAKDLDEVAGATEKSYTPSEKMKALIRARDGHCRFPGCCVPASKCQVDHIIPWAEGGPTA AWNLQLLCQRHHNMKTDGRFTADANGLAEIRWIGPMDVPAVTRPTGPLVKAMPRGIWGQVLRDRIQARFERIRDRALNKE D
Sequences:
>Translated_321_residues MAAMTNLPHLRAIQERYYFLSIRYLASIMIAVAKADPTLWEELDLRITDALTPVTDGEVMIQSSTLSKRIAAWIKELDPE PTPEPTPAKDYVQVTTTDEATYVRIKISGPNRLLLNDIITQLKDTDTEDSLPEALMAFLMEKIQLKITKYLFTPHNHPDQ AWSPDYGDIDPEAYANATLVCAKDLDEVAGATEKSYTPSEKMKALIRARDGHCRFPGCCVPASKCQVDHIIPWAEGGPTA AWNLQLLCQRHHNMKTDGRFTADANGLAEIRWIGPMDVPAVTRPTGPLVKAMPRGIWGQVLRDRIQARFERIRDRALNKE D >Mature_320_residues AAMTNLPHLRAIQERYYFLSIRYLASIMIAVAKADPTLWEELDLRITDALTPVTDGEVMIQSSTLSKRIAAWIKELDPEP TPEPTPAKDYVQVTTTDEATYVRIKISGPNRLLLNDIITQLKDTDTEDSLPEALMAFLMEKIQLKITKYLFTPHNHPDQA WSPDYGDIDPEAYANATLVCAKDLDEVAGATEKSYTPSEKMKALIRARDGHCRFPGCCVPASKCQVDHIIPWAEGGPTAA WNLQLLCQRHHNMKTDGRFTADANGLAEIRWIGPMDVPAVTRPTGPLVKAMPRGIWGQVLRDRIQARFERIRDRALNKED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3776 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 36094; Mature: 35963
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMTNLPHLRAIQERYYFLSIRYLASIMIAVAKADPTLWEELDLRITDALTPVTDGEVM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCEEEECCCCCCCCCCEE IQSSTLSKRIAAWIKELDPEPTPEPTPAKDYVQVTTTDEATYVRIKISGPNRLLLNDIIT EEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCHHHHHHHH QLKDTDTEDSLPEALMAFLMEKIQLKITKYLFTPHNHPDQAWSPDYGDIDPEAYANATLV HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHCCEEEE CAKDLDEVAGATEKSYTPSEKMKALIRARDGHCRFPGCCVPASKCQVDHIIPWAEGGPTA ECCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC AWNLQLLCQRHHNMKTDGRFTADANGLAEIRWIGPMDVPAVTRPTGPLVKAMPRGIWGQV HHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHH LRDRIQARFERIRDRALNKED HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AAMTNLPHLRAIQERYYFLSIRYLASIMIAVAKADPTLWEELDLRITDALTPVTDGEVM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCEEEECCCCCCCCCCEE IQSSTLSKRIAAWIKELDPEPTPEPTPAKDYVQVTTTDEATYVRIKISGPNRLLLNDIIT EEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCHHHHHHHH QLKDTDTEDSLPEALMAFLMEKIQLKITKYLFTPHNHPDQAWSPDYGDIDPEAYANATLV HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHCCEEEE CAKDLDEVAGATEKSYTPSEKMKALIRARDGHCRFPGCCVPASKCQVDHIIPWAEGGPTA ECCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC AWNLQLLCQRHHNMKTDGRFTADANGLAEIRWIGPMDVPAVTRPTGPLVKAMPRGIWGQV HHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHH LRDRIQARFERIRDRALNKED HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]