Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145296487
Identifier: 145296487
GI number: 145296487
Start: 2636543
End: 2637709
Strand: Direct
Name: 145296487
Synonym: cgR_2398
Alternate gene names: NA
Gene position: 2636543-2637709 (Clockwise)
Preceding gene: 145296486
Following gene: 145296488
Centisome position: 79.55
GC content: 58.35
Gene sequence:
>1167_bases ATGACCACTGACATCTACTTCAGCCACAACAACCCACACGACCCATACGCCCACCACACCACCGAACTCAACCGCGACAC CCACCACCTCTGGGTCACCCTCACCACCGACTCCGACGACTTCGACGCCGACTCCTTTACCACCGAAGTCATCCGGATTA CCGGCTACTCCCGCCACGAAGTCAACAACGGCCTTAACGCCATGGCCGCGATGACCAACCTCCCACACCTACGCGCCATC CAAGAACGCTACTACTTCCTGAGCATCCGCTACCTCGCCTCCATCATGATCGCCGTGGCCAAAGCAGACCCCACCCTGTG GGAAGAACTCGACCTGCGCATCACCGACGCCTTAACCCCAGTCACCGACGGGGAAGTGATGATCCAGTCCTCCACCCTGT CCAAACGCATCGCCGCCTGGATCAAAGAACTCGACCCCGAACCCACACCAGAGCCCACACCAGCCAAGGACTATGTTCAG GTCACCACCACCGATGAGGCGACCTATGTCCGCATCAAAATCAGCGGCCCCAACCGCCTGCTCCTCAATGACATCATCAC CCAACTCAAAGACACAGACACCGAGGACAGCCTGCCTGAAGCGCTCATGGCCTTCCTGATGGAGAAAATCCAGTTAAAGA TCACCAAGTACCTTTTCACCCCGCACAATCACCCCGATCAGGCATGGTCACCGGACTACGGTGACATTGATCCCGAAGCC TATGCCAACGCCACCCTCGTGTGCGCCAAGGACTTAGATGAGGTCGCTGGAGCCACGGAGAAGAGCTACACCCCGAGTGA GAAGATGAAAGCACTGATCAGAGCTCGGGATGGGCATTGCCGCTTCCCAGGGTGTTGCGTCCCGGCGAGTAAATGCCAGG TCGATCACATTATCCCGTGGGCGGAGGGCGGCCCGACAGCGGCGTGGAACCTGCAGTTGTTGTGCCAGCGGCATCACAAT ATGAAAACCGATGGTCGCTTTACTGCTGATGCTAATGGATTGGCGGAGATTAGATGGATTGGGCCGATGGATGTACCAGC GGTGACCAGGCCGACGGGTCCGTTGGTGAAAGCGATGCCGCGGGGGATTTGGGGTCAGGTGTTGAGGGATCGGATCCAGG CTAGGTTTGAGCGGATCCGCGACCGCGCCCTCAACAAAGAAGACTAG
Upstream 100 bases:
>100_bases CACATCTAACAATCGAATAACTGTTCGAATAAAAGGTTGAAGGTGTCCCACCCCCACGGCACAATGGATGGCAAGAACAC ATGAATCCAGGGGGATACTC
Downstream 100 bases:
>100_bases AAGCGCACAGGTTTTTGCATGGCTAGACTTTGAATGAGTAAGCACGAACACATTTCAAAGGAAGGGTTTCACCATGGCAC GCGCACTCATTCTGGTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTTDIYFSHNNPHDPYAHHTTELNRDTHHLWVTLTTDSDDFDADSFTTEVIRITGYSRHEVNNGLNAMAAMTNLPHLRAI QERYYFLSIRYLASIMIAVAKADPTLWEELDLRITDALTPVTDGEVMIQSSTLSKRIAAWIKELDPEPTPEPTPAKDYVQ VTTTDEATYVRIKISGPNRLLLNDIITQLKDTDTEDSLPEALMAFLMEKIQLKITKYLFTPHNHPDQAWSPDYGDIDPEA YANATLVCAKDLDEVAGATEKSYTPSEKMKALIRARDGHCRFPGCCVPASKCQVDHIIPWAEGGPTAAWNLQLLCQRHHN MKTDGRFTADANGLAEIRWIGPMDVPAVTRPTGPLVKAMPRGIWGQVLRDRIQARFERIRDRALNKED
Sequences:
>Translated_388_residues MTTDIYFSHNNPHDPYAHHTTELNRDTHHLWVTLTTDSDDFDADSFTTEVIRITGYSRHEVNNGLNAMAAMTNLPHLRAI QERYYFLSIRYLASIMIAVAKADPTLWEELDLRITDALTPVTDGEVMIQSSTLSKRIAAWIKELDPEPTPEPTPAKDYVQ VTTTDEATYVRIKISGPNRLLLNDIITQLKDTDTEDSLPEALMAFLMEKIQLKITKYLFTPHNHPDQAWSPDYGDIDPEA YANATLVCAKDLDEVAGATEKSYTPSEKMKALIRARDGHCRFPGCCVPASKCQVDHIIPWAEGGPTAAWNLQLLCQRHHN MKTDGRFTADANGLAEIRWIGPMDVPAVTRPTGPLVKAMPRGIWGQVLRDRIQARFERIRDRALNKED >Mature_387_residues TTDIYFSHNNPHDPYAHHTTELNRDTHHLWVTLTTDSDDFDADSFTTEVIRITGYSRHEVNNGLNAMAAMTNLPHLRAIQ ERYYFLSIRYLASIMIAVAKADPTLWEELDLRITDALTPVTDGEVMIQSSTLSKRIAAWIKELDPEPTPEPTPAKDYVQV TTTDEATYVRIKISGPNRLLLNDIITQLKDTDTEDSLPEALMAFLMEKIQLKITKYLFTPHNHPDQAWSPDYGDIDPEAY ANATLVCAKDLDEVAGATEKSYTPSEKMKALIRARDGHCRFPGCCVPASKCQVDHIIPWAEGGPTAAWNLQLLCQRHHNM KTDGRFTADANGLAEIRWIGPMDVPAVTRPTGPLVKAMPRGIWGQVLRDRIQARFERIRDRALNKED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3776 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 43835; Mature: 43704
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDIYFSHNNPHDPYAHHTTELNRDTHHLWVTLTTDSDDFDADSFTTEVIRITGYSRHE CCCEEEECCCCCCCCCCCCCHHCCCCCEEEEEEEEECCCCCCCCHHEEEEEEEECCCHHH VNNGLNAMAAMTNLPHLRAIQERYYFLSIRYLASIMIAVAKADPTLWEELDLRITDALTP HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCEEEECCCCC VTDGEVMIQSSTLSKRIAAWIKELDPEPTPEPTPAKDYVQVTTTDEATYVRIKISGPNRL CCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCEE LLNDIITQLKDTDTEDSLPEALMAFLMEKIQLKITKYLFTPHNHPDQAWSPDYGDIDPEA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHH YANATLVCAKDLDEVAGATEKSYTPSEKMKALIRARDGHCRFPGCCVPASKCQVDHIIPW HCCEEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEECCC AEGGPTAAWNLQLLCQRHHNMKTDGRFTADANGLAEIRWIGPMDVPAVTRPTGPLVKAMP CCCCCCCEEHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHC RGIWGQVLRDRIQARFERIRDRALNKED CHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTDIYFSHNNPHDPYAHHTTELNRDTHHLWVTLTTDSDDFDADSFTTEVIRITGYSRHE CCEEEECCCCCCCCCCCCCHHCCCCCEEEEEEEEECCCCCCCCHHEEEEEEEECCCHHH VNNGLNAMAAMTNLPHLRAIQERYYFLSIRYLASIMIAVAKADPTLWEELDLRITDALTP HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCEEEECCCCC VTDGEVMIQSSTLSKRIAAWIKELDPEPTPEPTPAKDYVQVTTTDEATYVRIKISGPNRL CCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCEE LLNDIITQLKDTDTEDSLPEALMAFLMEKIQLKITKYLFTPHNHPDQAWSPDYGDIDPEA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCHHH YANATLVCAKDLDEVAGATEKSYTPSEKMKALIRARDGHCRFPGCCVPASKCQVDHIIPW HCCEEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEECCC AEGGPTAAWNLQLLCQRHHNMKTDGRFTADANGLAEIRWIGPMDVPAVTRPTGPLVKAMP CCCCCCCEEHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHC RGIWGQVLRDRIQARFERIRDRALNKED CHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]