Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145296090
Identifier: 145296090
GI number: 145296090
Start: 2211000
End: 2212205
Strand: Reverse
Name: 145296090
Synonym: cgR_2012
Alternate gene names: NA
Gene position: 2212205-2211000 (Counterclockwise)
Preceding gene: 145296091
Following gene: 145296088
Centisome position: 66.75
GC content: 55.39
Gene sequence:
>1206_bases ATGAGCCAGAACCGCATCAGGACCACTCACGTTGGTTCCTTGCCCCGTACCCCAGAGCTACTTGATGCAAACATCAAGCG TTCTAACGGTGAGATTGGGGAGGAGGAATTCTTCCAGATTCTGCAGTCTTCTGTAGATGACGTGATCAAGCGCCAGGTTG ACCTGGGTATCGACATCCTTAACGAGGGCGAATACGGCCACGTCACCTCCGGTGCAGTTGACTTCGGTGCATGGTGGAAC TACTCCTTCACCCGCCTGGGCGGACTGACAATGACCGATACCGACCGTTGGGCAAGCCAGGAAGCAGTGCGTTCCACCCC TGGCAACATCAAGCTGACCAGCTTCTCTGATCGTCGCGACCGCGCATTGTTCAGCGAAGCATACGAGGATCCAGTATCTG GCATCTTCACCGGCCGCGCTTCTGTGGGCAACCCAGAGTTCACCGGACCTATTACCTACATTGGCCAGGAAGAAACTCAG ACGGATGTTGATCTGCTGAAGAAGGGCATGAACGCAGCGGGAGCTACCGACGGCTTCGTTGCAGCACTATCCCCAGGATC TGCAGCTCGATTGACCAACAAGTTCTACGACACTGATGAAGAAGTCGTCGCAGCATGTGCTGATGCGCTTTCCCAGGAAT ACAAGATCATCACCGATGCAGGTCTGACCGTTCAGCTCGACGCACCGGACTTGGCAGAAGCATGGGATCAGATCAACCCA GAGCCAAGCGTGAAGGATTACTTGGACTGGATCGGTACACGCATCGATGCCATCAACAGTGCAGTGAAGGGCCTTCCAAA GGAACAGACCCGCCTGCACATCTGCTGGGGCTCTTGGCACGGACCACACGTCACTGACATCCCATTCGGTGACATCATTG GTGAGATCCTGCGCGCAGAGGTCGGTGGCTTCTCCTTCGAAGGCGCATCTCCTCGTCACGCACACGAGTGGCGTGTATGG GAAGAAAACAAGCTTCCTGAAGGCTCTGTTATCTACCCTGGTGTTGTGTCTCACTCCATCAACGCTGTGGAGCACCCACG CCTGGTTGCTGATCGTATCGTTCAGTTCGCCAAGCTTGTTGGCCCTGAGAACGTCATTGCGTCCACTGACTGTGGTCTGG GCGGACGTCTGCATTCCCAGATCGCATGGGCAAAGCTGGAGTCCCTAGTAGAGGGCGCTCGCATTGCATCAAAGGAACTG TTCTAA
Upstream 100 bases:
>100_bases ATGAATAAAATTCCGGGTGCAGTGACCGTAGGTGAGGTAAACGCGGTTAGAGTCGAATGAGAGTTTGATACTTTCTTTCG ACTTTTAGATTGGATTTTCA
Downstream 100 bases:
>100_bases GCTAGACAACGAGGGTTGCTAGTCTAAGCAGCAAAATGAGCGGCTGTTGTTCCTTCAGGAAAATTATCTGAAGGAACAAC AGCCGCTCATTTTATGTCAG
Product: hypothetical protein
Products: tetrahydropteroyltri-L-glutamate; L-methionine
Alternate protein names: Methionine Synthase II; Methionine Synthase II- Like Protein; EpoxyalkaneCo M Transferase; Methyltransferase; Methionine Synthase Vitamin-B12 Independent Protein
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSQNRIRTTHVGSLPRTPELLDANIKRSNGEIGEEEFFQILQSSVDDVIKRQVDLGIDILNEGEYGHVTSGAVDFGAWWN YSFTRLGGLTMTDTDRWASQEAVRSTPGNIKLTSFSDRRDRALFSEAYEDPVSGIFTGRASVGNPEFTGPITYIGQEETQ TDVDLLKKGMNAAGATDGFVAALSPGSAARLTNKFYDTDEEVVAACADALSQEYKIITDAGLTVQLDAPDLAEAWDQINP EPSVKDYLDWIGTRIDAINSAVKGLPKEQTRLHICWGSWHGPHVTDIPFGDIIGEILRAEVGGFSFEGASPRHAHEWRVW EENKLPEGSVIYPGVVSHSINAVEHPRLVADRIVQFAKLVGPENVIASTDCGLGGRLHSQIAWAKLESLVEGARIASKEL F
Sequences:
>Translated_401_residues MSQNRIRTTHVGSLPRTPELLDANIKRSNGEIGEEEFFQILQSSVDDVIKRQVDLGIDILNEGEYGHVTSGAVDFGAWWN YSFTRLGGLTMTDTDRWASQEAVRSTPGNIKLTSFSDRRDRALFSEAYEDPVSGIFTGRASVGNPEFTGPITYIGQEETQ TDVDLLKKGMNAAGATDGFVAALSPGSAARLTNKFYDTDEEVVAACADALSQEYKIITDAGLTVQLDAPDLAEAWDQINP EPSVKDYLDWIGTRIDAINSAVKGLPKEQTRLHICWGSWHGPHVTDIPFGDIIGEILRAEVGGFSFEGASPRHAHEWRVW EENKLPEGSVIYPGVVSHSINAVEHPRLVADRIVQFAKLVGPENVIASTDCGLGGRLHSQIAWAKLESLVEGARIASKEL F >Mature_400_residues SQNRIRTTHVGSLPRTPELLDANIKRSNGEIGEEEFFQILQSSVDDVIKRQVDLGIDILNEGEYGHVTSGAVDFGAWWNY SFTRLGGLTMTDTDRWASQEAVRSTPGNIKLTSFSDRRDRALFSEAYEDPVSGIFTGRASVGNPEFTGPITYIGQEETQT DVDLLKKGMNAAGATDGFVAALSPGSAARLTNKFYDTDEEVVAACADALSQEYKIITDAGLTVQLDAPDLAEAWDQINPE PSVKDYLDWIGTRIDAINSAVKGLPKEQTRLHICWGSWHGPHVTDIPFGDIIGEILRAEVGGFSFEGASPRHAHEWRVWE ENKLPEGSVIYPGVVSHSINAVEHPRLVADRIVQFAKLVGPENVIASTDCGLGGRLHSQIAWAKLESLVEGARIASKELF
Specific function: Unknown
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.14
Molecular weight: Translated: 43895; Mature: 43764
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNRIRTTHVGSLPRTPELLDANIKRSNGEIGEEEFFQILQSSVDDVIKRQVDLGIDIL CCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE NEGEYGHVTSGAVDFGAWWNYSFTRLGGLTMTDTDRWASQEAVRSTPGNIKLTSFSDRRD CCCCCCCEECCCEECCCCCCCCHHHHCCEEECCCHHHHHHHHHHCCCCCEEEEECCCHHH RALFSEAYEDPVSGIFTGRASVGNPEFTGPITYIGQEETQTDVDLLKKGMNAAGATDGFV HHHHHHHHHCHHHHEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCEE AALSPGSAARLTNKFYDTDEEVVAACADALSQEYKIITDAGLTVQLDAPDLAEAWDQINP EEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEECCCCEEEECCCHHHHHHHHCCC EPSVKDYLDWIGTRIDAINSAVKGLPKEQTRLHICWGSWHGPHVTDIPFGDIIGEILRAE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHH VGGFSFEGASPRHAHEWRVWEENKLPEGSVIYPGVVSHSINAVEHPRLVADRIVQFAKLV HCCEECCCCCCCCCCCCCEECCCCCCCCCEECCCHHHHCCCHHCCHHHHHHHHHHHHHHC GPENVIASTDCGLGGRLHSQIAWAKLESLVEGARIASKELF CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQNRIRTTHVGSLPRTPELLDANIKRSNGEIGEEEFFQILQSSVDDVIKRQVDLGIDIL CCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE NEGEYGHVTSGAVDFGAWWNYSFTRLGGLTMTDTDRWASQEAVRSTPGNIKLTSFSDRRD CCCCCCCEECCCEECCCCCCCCHHHHCCEEECCCHHHHHHHHHHCCCCCEEEEECCCHHH RALFSEAYEDPVSGIFTGRASVGNPEFTGPITYIGQEETQTDVDLLKKGMNAAGATDGFV HHHHHHHHHCHHHHEEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCEE AALSPGSAARLTNKFYDTDEEVVAACADALSQEYKIITDAGLTVQLDAPDLAEAWDQINP EEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEECCCCEEEECCCHHHHHHHHCCC EPSVKDYLDWIGTRIDAINSAVKGLPKEQTRLHICWGSWHGPHVTDIPFGDIIGEILRAE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHH VGGFSFEGASPRHAHEWRVWEENKLPEGSVIYPGVVSHSINAVEHPRLVADRIVQFAKLV HCCEECCCCCCCCCCCCCEECCCCCCCCCEECCCHHHHCCCHHCCHHHHHHHHHHHHHHC GPENVIASTDCGLGGRLHSQIAWAKLESLVEGARIASKELF CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5-methyltetrahydropteroyltri-L-glutamate; L-homocysteine
Specific reaction: 5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = tetrahydropteroyltri-L-glutamate + L-methionine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA