Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is ilvA [H]
Identifier: 145296088
GI number: 145296088
Start: 2208859
End: 2210130
Strand: Reverse
Name: ilvA [H]
Synonym: cgR_2010
Alternate gene names: 145296088
Gene position: 2210130-2208859 (Counterclockwise)
Preceding gene: 145296090
Following gene: 145296086
Centisome position: 66.69
GC content: 55.03
Gene sequence:
>1272_bases ATGGCTAGCGGAGCGGAGCTGATTCGTGCCGCCGACATTCAAACGGCGCAGGCACGAATTTCCTCCGTCATTGCACCAAC TCCATTGCAGTATTGCCCTCGTCTTTCTGAGGAAACCGGAGCGGAAATCTACCTTAAGCGTGAGGATCTGCAGGATGTTC GTTCCTACAAGATCCGCGGTGCGCTGAACTCTGGAGCGCAGCTCACTCAGGAGCAGCGTGATGCAGGTATCGTTGCCGCA TCTGCAGGTAACCATGCCCAGGGCGTGGCCTATGTGTGCAAGTCCTTGGGCGTTCAGGGACGCATCTATGTTCCTGTGCA GACTCCAAAGCAAAAGCGTGACCGCATCATGGTTCATGGTGGAGAGTTTGTCTCCTTGGTGGTCACCGGCAACAACTTTG ATGAAGCATCGGCTGCAGCGCATGAAGATGCAGAGCGCACCGGCGCAACGCTGATCGAGCCATTTGATGCTCGCAACACC GTCATTGGTCAGGGCACCGTGGCTGCTGAGATCTTGTCGCAGCTGACTTCCATGGGCAAGAGCGCTGATCATGTGATGGT GCCAGTAGGTGGCGGCGGTCTACTGGCGGGTGTGGTCAGCTACATGGCTGATATGGCACCACGCACTGCGATCGTTGGAA TTGAGCCTGCGGGAGCAGCATCCATGCAGGCTGCATTGCACAATGGTGGACCAATCACTTTGGAGACTGTTGATCCCTTT GTGGACGGCGCAGCAGTCAAACGTGTCGGAGATCTCAACTACACCATCGTGGAGAAGAACTTGGGTCGCGTACACATGAT GAGTGCCACCGAGGGCGCTGTGTGTACTGAGATGCTTGATCTCTACCAAAACGAAGGCATCATCGCGGAGCCTGCCGGTG CACTGTCTATCGCAGGGTTGAAGGAAATGTCCTTCGCGCCTGGTTCTGTCGTGGTGTGCATCATCTCTGGTGGCAACAAC GATGTGCTGCGTTATGCGGAAATCGCTGAGCGCTCCTTGGTACACCGCGGTTTGAAGCATTACTTCTTGGTGAACTTCCC GCAAAAGCCTGGTCAGTTGCGTCACTTCCTGGAAGATATCCTGGGACCGGATGATGACATCACGCTGTTTGAGTACCTCA AGCGCAACAACCGTGAGACCGGTACTGCGTTGGTGGGTATTCACTTGAGTGAAGCATCAGGATTGGATTCTTTGCTGGAA CGTATGGAGGAATCGGCAATTGATTCCCGTCGCCTCGAGCCGGGAACCCCTGAGTACGAATACTTGACCTAA
Upstream 100 bases:
>100_bases TTGGAAATAAAACCTATGCCAAAGTAGGTGCAATTCTAGGAGAGGATTACACTAGTCAACCATGAGTGAAACATACGTGT CTGAGAAAAGTCCAGGAGTG
Downstream 100 bases:
>100_bases ACATAGCTGAAGGCCACCTCAATCGAGGTGGCCTTTTTCTAGTTTCGGGTCAGGATCGCAAAGCCCCACGGCTGAAGGGT TGTGGAGGTGTCGGTGACAG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MASGAELIRAADIQTAQARISSVIAPTPLQYCPRLSEETGAEIYLKREDLQDVRSYKIRGALNSGAQLTQEQRDAGIVAA SAGNHAQGVAYVCKSLGVQGRIYVPVQTPKQKRDRIMVHGGEFVSLVVTGNNFDEASAAAHEDAERTGATLIEPFDARNT VIGQGTVAAEILSQLTSMGKSADHVMVPVGGGGLLAGVVSYMADMAPRTAIVGIEPAGAASMQAALHNGGPITLETVDPF VDGAAVKRVGDLNYTIVEKNLGRVHMMSATEGAVCTEMLDLYQNEGIIAEPAGALSIAGLKEMSFAPGSVVVCIISGGNN DVLRYAEIAERSLVHRGLKHYFLVNFPQKPGQLRHFLEDILGPDDDITLFEYLKRNNRETGTALVGIHLSEASGLDSLLE RMEESAIDSRRLEPGTPEYEYLT
Sequences:
>Translated_423_residues MASGAELIRAADIQTAQARISSVIAPTPLQYCPRLSEETGAEIYLKREDLQDVRSYKIRGALNSGAQLTQEQRDAGIVAA SAGNHAQGVAYVCKSLGVQGRIYVPVQTPKQKRDRIMVHGGEFVSLVVTGNNFDEASAAAHEDAERTGATLIEPFDARNT VIGQGTVAAEILSQLTSMGKSADHVMVPVGGGGLLAGVVSYMADMAPRTAIVGIEPAGAASMQAALHNGGPITLETVDPF VDGAAVKRVGDLNYTIVEKNLGRVHMMSATEGAVCTEMLDLYQNEGIIAEPAGALSIAGLKEMSFAPGSVVVCIISGGNN DVLRYAEIAERSLVHRGLKHYFLVNFPQKPGQLRHFLEDILGPDDDITLFEYLKRNNRETGTALVGIHLSEASGLDSLLE RMEESAIDSRRLEPGTPEYEYLT >Mature_422_residues ASGAELIRAADIQTAQARISSVIAPTPLQYCPRLSEETGAEIYLKREDLQDVRSYKIRGALNSGAQLTQEQRDAGIVAAS AGNHAQGVAYVCKSLGVQGRIYVPVQTPKQKRDRIMVHGGEFVSLVVTGNNFDEASAAAHEDAERTGATLIEPFDARNTV IGQGTVAAEILSQLTSMGKSADHVMVPVGGGGLLAGVVSYMADMAPRTAIVGIEPAGAASMQAALHNGGPITLETVDPFV DGAAVKRVGDLNYTIVEKNLGRVHMMSATEGAVCTEMLDLYQNEGIIAEPAGALSIAGLKEMSFAPGSVVVCIISGGNND VLRYAEIAERSLVHRGLKHYFLVNFPQKPGQLRHFLEDILGPDDDITLFEYLKRNNRETGTALVGIHLSEASGLDSLLER MEESAIDSRRLEPGTPEYEYLT
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia. Deaminates L-threonine, but also L-serine to a lesser extent [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=335, Percent_Identity=27.7611940298507, Blast_Score=116, Evalue=5e-26, Organism=Escherichia coli, GI1790207, Length=392, Percent_Identity=36.2244897959184, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI1789505, Length=321, Percent_Identity=33.3333333333333, Blast_Score=151, Evalue=8e-38, Organism=Escherichia coli, GI1789235, Length=207, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71991565, Length=346, Percent_Identity=29.7687861271676, Blast_Score=114, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17537387, Length=381, Percent_Identity=30.1837270341207, Blast_Score=114, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17508781, Length=283, Percent_Identity=29.3286219081272, Blast_Score=110, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6320930, Length=376, Percent_Identity=35.3723404255319, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322631, Length=320, Percent_Identity=31.875, Blast_Score=139, Evalue=7e-34, Organism=Saccharomyces cerevisiae, GI6319788, Length=236, Percent_Identity=27.5423728813559, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI21355833, Length=345, Percent_Identity=31.0144927536232, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24645328, Length=228, Percent_Identity=30.7017543859649, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR001721 - InterPro: IPR011820 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 45162; Mature: 45031
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGAELIRAADIQTAQARISSVIAPTPLQYCPRLSEETGAEIYLKREDLQDVRSYKIRG CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHEEECC ALNSGAQLTQEQRDAGIVAASAGNHAQGVAYVCKSLGVQGRIYVPVQTPKQKRDRIMVHG CCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHCCCEEEEEC GEFVSLVVTGNNFDEASAAAHEDAERTGATLIEPFDARNTVIGQGTVAAEILSQLTSMGK CCEEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCEEEECCHHHHHHHHHHHHCCC SADHVMVPVGGGGLLAGVVSYMADMAPRTAIVGIEPAGAASMQAALHNGGPITLETVDPF CCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEECCCH VDGAAVKRVGDLNYTIVEKNLGRVHMMSATEGAVCTEMLDLYQNEGIIAEPAGALSIAGL HCCHHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCEEECCH KEMSFAPGSVVVCIISGGNNDVLRYAEIAERSLVHRGLKHYFLVNFPQKPGQLRHFLEDI HHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH LGPDDDITLFEYLKRNNRETGTALVGIHLSEASGLDSLLERMEESAIDSRRLEPGTPEYE CCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC YLT CCC >Mature Secondary Structure ASGAELIRAADIQTAQARISSVIAPTPLQYCPRLSEETGAEIYLKREDLQDVRSYKIRG CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHEEECC ALNSGAQLTQEQRDAGIVAASAGNHAQGVAYVCKSLGVQGRIYVPVQTPKQKRDRIMVHG CCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHCCCEEEEEC GEFVSLVVTGNNFDEASAAAHEDAERTGATLIEPFDARNTVIGQGTVAAEILSQLTSMGK CCEEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCEEEECCHHHHHHHHHHHHCCC SADHVMVPVGGGGLLAGVVSYMADMAPRTAIVGIEPAGAASMQAALHNGGPITLETVDPF CCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCCEEEEECCCH VDGAAVKRVGDLNYTIVEKNLGRVHMMSATEGAVCTEMLDLYQNEGIIAEPAGALSIAGL HCCHHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCEEECCH KEMSFAPGSVVVCIISGGNNDVLRYAEIAERSLVHRGLKHYFLVNFPQKPGQLRHFLEDI HHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH LGPDDDITLFEYLKRNNRETGTALVGIHLSEASGLDSLLERMEESAIDSRRLEPGTPEYE CCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC YLT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1459955; 12948626 [H]