Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145296060
Identifier: 145296060
GI number: 145296060
Start: 2179991
End: 2181307
Strand: Reverse
Name: 145296060
Synonym: cgR_1982
Alternate gene names: NA
Gene position: 2181307-2179991 (Counterclockwise)
Preceding gene: 145296061
Following gene: 145296059
Centisome position: 65.82
GC content: 54.37
Gene sequence:
>1317_bases TTGGACACACGGGCTTTAACACGCGCTGAAATTGAGCAACTTCCCAGCATGTGGAAAAGCCCAGGGTTTGTGGCTGTCCT CGTGGCGGTTGCAGCAGCGTTCGGCAGTTGGTCACTTTTGCTTCCTGTGGTGCCATTGGCAGTGCTCAACAATGGGGGGT CAAGCGCTGTCGCAGGTGCCACCACTGGCATCTTCATGGCAGCCACAGTGATCACTCAGATTTTTACTCCCGCTGCCCTG CGGAAAATTGGCTACACCCCAGTGATGGCTTTCGCCGCATTCATGCTGGGTGTGCCAGCCATCGGCTACATCTTCAGCGT CGAGCCAATTCCAGTGCTGGTAGTGTCCGCACTTCGAGGAATTGGGTTCGGTGCGCTCACCGTCGCAGAATCTGCCTTAG TGGCGGAACTCGTTCCCGTGCGCTTCTTGGGCAAAGCCTCCGGCATGCTGGGCGTATTTATTGGCCTTTCCCAAATGCTT TTCCTGCCTGCCGGGTTGGCGTTAGGTGACCAATTTGGCTACAACGTGGTCTATGTTTTAGGTGCCGTTATCGCACTAGT TGCAGCGGTGATGTGTCTGCGTATTCCGCAGGTTAAGGCAGCTGCAAAGCAGCAACCACAGGTGAGCGAACAGGAGCGTT CTGTTTCCACCTGGAAGTTGGTGCTGGTTCCCTCCTTGGCTGTTACCAGTTTGTCAATGACTTTTGGCGCAGTGTCTTCA TTCCTTCCAGCTGCAGTCATTGAGTTAGATCCAGGATTAGGTGCTGCATTAGCGGGTATTATTTTATCCATTACCGGTGG TTCTTCAATGGTGTTCCGCTACCTGTCCGGCGTTATCGCTGACCGCCGCGGTGTGCCTGGTACCACGATGATTCCTGCTC AGATCATTGGGTTCTTAGGTGTCGTTTTAATCACCGTCACAATCTTCCAAGGCTGGTCCGTGTGGCTTTTGATTATAGGT GCAGTGATGTTTGGTGGTGCTTTTGGCATGGTGCAAAACGAAGCGTTGCTTTCAATGTTTTTCCGGCTTCCTCGCACTAG AGTCTCCGAAGCCTCCGCCATCTGGAATATCGCCTTTGATTCGGGAACAGGAATCGGCAGTTTCTTGTTGGGTATTGTGG CAGCATCCCTGGCTTACAGTGGGGCATTCGCTGCCGGCGCAGCCGTGATCTTGCTGGGAATTCTCATGACTGTTGCCGAC CGAATCGTCGGCCGCAATCGCATCACCGAATACAACAACACCCGCGCGCGTTTGCGCCAGGTGCCAGTCGCTCGGCGTGC AGTGCAAGGGCTGCGCAACAGGCGCAAAGATCGCTAA
Upstream 100 bases:
>100_bases TATAAATCAGAAAACAAAATCCTCATGGTTGCAGCCGGCCTCATCGCAGTGCTGGCAGTGGCTGGAGGAATTCTATGGTT GTTGGGAGAGATGACGTAAT
Downstream 100 bases:
>100_bases AACGCTTTTCGACGCCACCCCTTACTTGGCCCACCAACCCGCTGGCATAAACCCGCGATTTGATGAACTTATGGCGACAC TGAACTCAGAGCCTCATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Transporter; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Permease; Mfs Transporter; Transport Membrane Protein; MFS Transporter; Permease Of Facilitator Superfamily; Transmembrane Transporter
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MDTRALTRAEIEQLPSMWKSPGFVAVLVAVAAAFGSWSLLLPVVPLAVLNNGGSSAVAGATTGIFMAATVITQIFTPAAL RKIGYTPVMAFAAFMLGVPAIGYIFSVEPIPVLVVSALRGIGFGALTVAESALVAELVPVRFLGKASGMLGVFIGLSQML FLPAGLALGDQFGYNVVYVLGAVIALVAAVMCLRIPQVKAAAKQQPQVSEQERSVSTWKLVLVPSLAVTSLSMTFGAVSS FLPAAVIELDPGLGAALAGIILSITGGSSMVFRYLSGVIADRRGVPGTTMIPAQIIGFLGVVLITVTIFQGWSVWLLIIG AVMFGGAFGMVQNEALLSMFFRLPRTRVSEASAIWNIAFDSGTGIGSFLLGIVAASLAYSGAFAAGAAVILLGILMTVAD RIVGRNRITEYNNTRARLRQVPVARRAVQGLRNRRKDR
Sequences:
>Translated_438_residues MDTRALTRAEIEQLPSMWKSPGFVAVLVAVAAAFGSWSLLLPVVPLAVLNNGGSSAVAGATTGIFMAATVITQIFTPAAL RKIGYTPVMAFAAFMLGVPAIGYIFSVEPIPVLVVSALRGIGFGALTVAESALVAELVPVRFLGKASGMLGVFIGLSQML FLPAGLALGDQFGYNVVYVLGAVIALVAAVMCLRIPQVKAAAKQQPQVSEQERSVSTWKLVLVPSLAVTSLSMTFGAVSS FLPAAVIELDPGLGAALAGIILSITGGSSMVFRYLSGVIADRRGVPGTTMIPAQIIGFLGVVLITVTIFQGWSVWLLIIG AVMFGGAFGMVQNEALLSMFFRLPRTRVSEASAIWNIAFDSGTGIGSFLLGIVAASLAYSGAFAAGAAVILLGILMTVAD RIVGRNRITEYNNTRARLRQVPVARRAVQGLRNRRKDR >Mature_438_residues MDTRALTRAEIEQLPSMWKSPGFVAVLVAVAAAFGSWSLLLPVVPLAVLNNGGSSAVAGATTGIFMAATVITQIFTPAAL RKIGYTPVMAFAAFMLGVPAIGYIFSVEPIPVLVVSALRGIGFGALTVAESALVAELVPVRFLGKASGMLGVFIGLSQML FLPAGLALGDQFGYNVVYVLGAVIALVAAVMCLRIPQVKAAAKQQPQVSEQERSVSTWKLVLVPSLAVTSLSMTFGAVSS FLPAAVIELDPGLGAALAGIILSITGGSSMVFRYLSGVIADRRGVPGTTMIPAQIIGFLGVVLITVTIFQGWSVWLLIIG AVMFGGAFGMVQNEALLSMFFRLPRTRVSEASAIWNIAFDSGTGIGSFLLGIVAASLAYSGAFAAGAAVILLGILMTVAD RIVGRNRITEYNNTRARLRQVPVARRAVQGLRNRRKDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45834; Mature: 45834
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTRALTRAEIEQLPSMWKSPGFVAVLVAVAAAFGSWSLLLPVVPLAVLNNGGSSAVAGA CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHH TTGIFMAATVITQIFTPAALRKIGYTPVMAFAAFMLGVPAIGYIFSVEPIPVLVVSALRG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHEECCCHHHHHHHHHHH IGFGALTVAESALVAELVPVRFLGKASGMLGVFIGLSQMLFLPAGLALGDQFGYNVVYVL CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHH GAVIALVAAVMCLRIPQVKAAAKQQPQVSEQERSVSTWKLVLVPSLAVTSLSMTFGAVSS HHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHCCHHHEEEEEECHHHHHHHHHHHHHHHH FLPAAVIELDPGLGAALAGIILSITGGSSMVFRYLSGVIADRRGVPGTTMIPAQIIGFLG HHHHHHHEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH VVLITVTIFQGWSVWLLIIGAVMFGGAFGMVQNEALLSMFFRLPRTRVSEASAIWNIAFD HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEC SGTGIGSFLLGIVAASLAYSGAFAAGAAVILLGILMTVADRIVGRNRITEYNNTRARLRQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH VPVARRAVQGLRNRRKDR HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDTRALTRAEIEQLPSMWKSPGFVAVLVAVAAAFGSWSLLLPVVPLAVLNNGGSSAVAGA CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHH TTGIFMAATVITQIFTPAALRKIGYTPVMAFAAFMLGVPAIGYIFSVEPIPVLVVSALRG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHEECCCHHHHHHHHHHH IGFGALTVAESALVAELVPVRFLGKASGMLGVFIGLSQMLFLPAGLALGDQFGYNVVYVL CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHH GAVIALVAAVMCLRIPQVKAAAKQQPQVSEQERSVSTWKLVLVPSLAVTSLSMTFGAVSS HHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHCCHHHEEEEEECHHHHHHHHHHHHHHHH FLPAAVIELDPGLGAALAGIILSITGGSSMVFRYLSGVIADRRGVPGTTMIPAQIIGFLG HHHHHHHEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH VVLITVTIFQGWSVWLLIIGAVMFGGAFGMVQNEALLSMFFRLPRTRVSEASAIWNIAFD HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEC SGTGIGSFLLGIVAASLAYSGAFAAGAAVILLGILMTVADRIVGRNRITEYNNTRARLRQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH VPVARRAVQGLRNRRKDR HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA