Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is catE [H]
Identifier: 145296050
GI number: 145296050
Start: 2170261
End: 2171163
Strand: Reverse
Name: catE [H]
Synonym: cgR_1972
Alternate gene names: 145296050
Gene position: 2171163-2170261 (Counterclockwise)
Preceding gene: 145296051
Following gene: 145296049
Centisome position: 65.51
GC content: 52.05
Gene sequence:
>903_bases ATGGCACTTCTTGAGCAGAGCATCAATAGCGACACCTTCATGGATGCAGTTAGCCTTCGCGTCGGCGACCTAGAGGGTAT GACCAGTTACTACTCTTCAATCCTTAGCGTTGAACCAATGGAAGAAAAAGTTCACGGAAAAGAAGTTCACCGTGTACTCG GTCGCAATGGCACCCCACTGCTTCGCCTGATTTCTACCCCAGGTCTCCCTGCGGTAGATCCTCGTCAAGCTGGCCTTTAT CACACCGCTTTCCTCTTCGATACCCAAGAGAGCTTGGCTGCCACCGTTTACCGCGCAGCGCAAGAATCACGCTCACGTTT TGTGGGTTCTTCAGATCACCTAGTCTCTGAAGCTTTTTACTTCACCGATCCTGAGGGAAACGGCATTGAGCTCTATGTTG ACCGCCCTCGAAGTGCATGGAAGTATGCAGACAACGGCGATGTCCGCATGGACACCATCTACTTGGATCCAAACCAGTAC CTTCAGAGTCATCTCAGCGAAACCGTTTTGAACAACACCGCTATTCTCCCTGCGAGCATCGGACACGTTCACCTTCAGGT AGGCAACGTCGAGCGAGCCCGTCAATTCTATGTGGACAAGATTGGTTTTGATGCCACCACATCAATCCCCAATGCACTGT TTGCCTCCGCAGGTGGATATCACCACCATGTGGCCATGAATACCTGGAACTCAGCAGGTGCAGGTCCACGCGCAGCAACC TTGGGTCTTGCTGATGTAGCAGTGATCGTTCCAGTCCGTGAGGATCTGGACATGCTGGTCTCACGCCTAAAGGGGGAGGA ATTCTTTGACAACGGCACCTCTGTTGTGACCCGTGATCCATGGGGAACGCACATCACCGTTTCACTTCCGGGTGTCTCAA CAGATGAACTTCTGAACCGATAA
Upstream 100 bases:
>100_bases AATCCGCCTCATTTAAGAATTTACTTGACACGGAAAGTAAATTGGTGAACAATGGTGTTCAACAGCAAAACAGCCACCAA CACTTAAAGGATGAAACACC
Downstream 100 bases:
>100_bases CTCATTCTGGTAGCAGGAACCCCAATCTTAGGCTAAGTTCAGGGCCGTGAAACCAGTAGGTAGGCACAGTACAGTTCAAG AATCAGCTCCCAGCTCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: Catechol-induced ring cleavage extradiol dioxygenase [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MALLEQSINSDTFMDAVSLRVGDLEGMTSYYSSILSVEPMEEKVHGKEVHRVLGRNGTPLLRLISTPGLPAVDPRQAGLY HTAFLFDTQESLAATVYRAAQESRSRFVGSSDHLVSEAFYFTDPEGNGIELYVDRPRSAWKYADNGDVRMDTIYLDPNQY LQSHLSETVLNNTAILPASIGHVHLQVGNVERARQFYVDKIGFDATTSIPNALFASAGGYHHHVAMNTWNSAGAGPRAAT LGLADVAVIVPVREDLDMLVSRLKGEEFFDNGTSVVTRDPWGTHITVSLPGVSTDELLNR
Sequences:
>Translated_300_residues MALLEQSINSDTFMDAVSLRVGDLEGMTSYYSSILSVEPMEEKVHGKEVHRVLGRNGTPLLRLISTPGLPAVDPRQAGLY HTAFLFDTQESLAATVYRAAQESRSRFVGSSDHLVSEAFYFTDPEGNGIELYVDRPRSAWKYADNGDVRMDTIYLDPNQY LQSHLSETVLNNTAILPASIGHVHLQVGNVERARQFYVDKIGFDATTSIPNALFASAGGYHHHVAMNTWNSAGAGPRAAT LGLADVAVIVPVREDLDMLVSRLKGEEFFDNGTSVVTRDPWGTHITVSLPGVSTDELLNR >Mature_299_residues ALLEQSINSDTFMDAVSLRVGDLEGMTSYYSSILSVEPMEEKVHGKEVHRVLGRNGTPLLRLISTPGLPAVDPRQAGLYH TAFLFDTQESLAATVYRAAQESRSRFVGSSDHLVSEAFYFTDPEGNGIELYVDRPRSAWKYADNGDVRMDTIYLDPNQYL QSHLSETVLNNTAILPASIGHVHLQVGNVERARQFYVDKIGFDATTSIPNALFASAGGYHHHVAMNTWNSAGAGPRAATL GLADVAVIVPVREDLDMLVSRLKGEEFFDNGTSVVTRDPWGTHITVSLPGVSTDELLNR
Specific function: Involved in the meta cleavage of catechol to 2- hydroxymuconic semialdehyde. Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]
COG id: COG2514
COG function: function code R; Predicted ring-cleavage extradiol dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 32910; Mature: 32779
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLEQSINSDTFMDAVSLRVGDLEGMTSYYSSILSVEPMEEKVHGKEVHRVLGRNGTPL CCCHHHHCCCCHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCE LRLISTPGLPAVDPRQAGLYHTAFLFDTQESLAATVYRAAQESRSRFVGSSDHLVSEAFY EEEECCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEE FTDPEGNGIELYVDRPRSAWKYADNGDVRMDTIYLDPNQYLQSHLSETVLNNTAILPASI EECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCEEEEECC GHVHLQVGNVERARQFYVDKIGFDATTSIPNALFASAGGYHHHVAMNTWNSAGAGPRAAT CEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCHHH LGLADVAVIVPVREDLDMLVSRLKGEEFFDNGTSVVTRDPWGTHITVSLPGVSTDELLNR CCCEEEEEEEECHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCEEEEEECCCCHHHHHCC >Mature Secondary Structure ALLEQSINSDTFMDAVSLRVGDLEGMTSYYSSILSVEPMEEKVHGKEVHRVLGRNGTPL CCHHHHCCCCHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCE LRLISTPGLPAVDPRQAGLYHTAFLFDTQESLAATVYRAAQESRSRFVGSSDHLVSEAFY EEEECCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEE FTDPEGNGIELYVDRPRSAWKYADNGDVRMDTIYLDPNQYLQSHLSETVLNNTAILPASI EECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCEEEEECC GHVHLQVGNVERARQFYVDKIGFDATTSIPNALFASAGGYHHHVAMNTWNSAGAGPRAAT CEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCHHH LGLADVAVIVPVREDLDMLVSRLKGEEFFDNGTSVVTRDPWGTHITVSLPGVSTDELLNR CCCEEEEEEEECHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCEEEEEECCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704981; 9384377 [H]