Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is pyk [H]
Identifier: 145296051
GI number: 145296051
Start: 2171338
End: 2172771
Strand: Reverse
Name: pyk [H]
Synonym: cgR_1973
Alternate gene names: 145296051
Gene position: 2172771-2171338 (Counterclockwise)
Preceding gene: 145296052
Following gene: 145296050
Centisome position: 65.56
GC content: 55.93
Gene sequence:
>1434_bases ATGGGCGTGGATAGACGAACTAAGATTGTATGTACCCTAGGCCCAGCGGTGGCTAGTGCAGATGGAATTCTGCGTTTGGT AGAAGACGGCATGGATGTTGCTCGCCTCAACTTCTCCCATGGTGACCACCCAGATCATGAGCAAAACTACAAGTGGGTCC GCGAGGCGGCGGAGAAGACTGGCCGTGCAGTCGGTATTCTCGCAGACCTCCAAGGACCGAAGATCCGTCTTGGCCGTTTC ACTGACGGCGCAACCGTGTGGGAAAACGGCGAGACCATTCGGATCACCGTTGACGATGTAGAGGGAACGCACGATCGTGT GTCCACCACCTACAAGAATCTGGCAAAAGACGCGAAGCCAGGCGACCGCCTGCTCGTTGATGACGGCAAGGTTGGCCTCG TCTGCGTTTCCGTCGAAGGCAACGACGTCATCTGTGAGGTTGTTGAGGGCGGACCAGTCTCCAACAACAAGGGTGTTTCC CTGCCAGGTATGGATATTTCCGTACCTGCACTGTCCGAAAAGGATATCCGTGACCTGCGCTTCGCCCTGAAGCTCGGCGT GGACTTTATTGCACTGTCCTTCGTACGTTCCCCAGCAGATGCTGAACTCGTTCACAAGATCATGGACGAAGAAGGTCGTC GTGTTCCTGTGATCGCCAAGCTGGAAAAGCCAGAGGCTGTCACCTCCCTCGAGCCAATCGTGTTGGCATTCGACGCCGTC ATGGTTGCTCGTGGTGACCTCGGCGTTGAGGTTCCTCTGGAGGAGGTTCCACTGGTTCAGAAGCGCGCAATCCAGATTGC CCGTGAGAACGCAAAGCCAGTTATCGTGGCAACCCAGATGCTGGATTCCATGATTGAGAACTCCCGCCCAACCCGTGCGG AAGCTTCTGACGTGGCAAACGCTGTGCTCGATGGCGCAGATGCTGTCATGCTTTCTGGTGAAACTTCAGTGGGCAAAGAT CCGCACAACGTTGTGCGCACCATGGCTCGCATTGTTCGCTTCGCTGAAACCGACGGTCGCGTCCCAGACCTGACCCACAT CCCTCGCACTAAGCGTGGCGTTATTTCCTACTCTGCACGTGATATCGCAGAGCGCCTCAACGCTCGTGCATTGGTTGCGT TCACCACCTCTGGTGATACCGCAAAGCGTGTGGCTCGTCTGCACAGCCACCTGCCACTGCTCGTGTTCACTCCAAATGAG GCAGTTCGCTCTGAGCTGGCGCTGACCTGGGGTGCAACCACCTTCCGGTGCCCACCTGTCAGCGATACCGATGACATGAT GCGCGAAGTCGACCGTGCTCTTTTAGCAATGCCTGAGTACAACAAGGGTGACATGATGGTTGTTGTTGCAGGTTCCCCTC CTGGTGTTACCGGTAACACCAACATGATTCACGTCCACCTTCTTGGTGACGACACAAGGATTGCAAAGCTCTAA
Upstream 100 bases:
>100_bases CAGAGGCGTAGAACATTGTCTGTCCACACTCTGGGTCGCAAGATTCATCGAGAATTAATGGTAGTACCTGTGGCTTGAGG GGGAATGACGTACTAGGCTT
Downstream 100 bases:
>100_bases TCGCTTAAATCTTTCAAAAAATGCGTTGACACTGTACGTGGTGTCAGCGCATTTTTCGTGGCTAGGGCAGGGGAAATCCG CCTCATTTAAGAATTTACTT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MGVDRRTKIVCTLGPAVASADGILRLVEDGMDVARLNFSHGDHPDHEQNYKWVREAAEKTGRAVGILADLQGPKIRLGRF TDGATVWENGETIRITVDDVEGTHDRVSTTYKNLAKDAKPGDRLLVDDGKVGLVCVSVEGNDVICEVVEGGPVSNNKGVS LPGMDISVPALSEKDIRDLRFALKLGVDFIALSFVRSPADAELVHKIMDEEGRRVPVIAKLEKPEAVTSLEPIVLAFDAV MVARGDLGVEVPLEEVPLVQKRAIQIARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKD PHNVVRTMARIVRFAETDGRVPDLTHIPRTKRGVISYSARDIAERLNARALVAFTTSGDTAKRVARLHSHLPLLVFTPNE AVRSELALTWGATTFRCPPVSDTDDMMREVDRALLAMPEYNKGDMMVVVAGSPPGVTGNTNMIHVHLLGDDTRIAKL
Sequences:
>Translated_477_residues MGVDRRTKIVCTLGPAVASADGILRLVEDGMDVARLNFSHGDHPDHEQNYKWVREAAEKTGRAVGILADLQGPKIRLGRF TDGATVWENGETIRITVDDVEGTHDRVSTTYKNLAKDAKPGDRLLVDDGKVGLVCVSVEGNDVICEVVEGGPVSNNKGVS LPGMDISVPALSEKDIRDLRFALKLGVDFIALSFVRSPADAELVHKIMDEEGRRVPVIAKLEKPEAVTSLEPIVLAFDAV MVARGDLGVEVPLEEVPLVQKRAIQIARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKD PHNVVRTMARIVRFAETDGRVPDLTHIPRTKRGVISYSARDIAERLNARALVAFTTSGDTAKRVARLHSHLPLLVFTPNE AVRSELALTWGATTFRCPPVSDTDDMMREVDRALLAMPEYNKGDMMVVVAGSPPGVTGNTNMIHVHLLGDDTRIAKL >Mature_476_residues GVDRRTKIVCTLGPAVASADGILRLVEDGMDVARLNFSHGDHPDHEQNYKWVREAAEKTGRAVGILADLQGPKIRLGRFT DGATVWENGETIRITVDDVEGTHDRVSTTYKNLAKDAKPGDRLLVDDGKVGLVCVSVEGNDVICEVVEGGPVSNNKGVSL PGMDISVPALSEKDIRDLRFALKLGVDFIALSFVRSPADAELVHKIMDEEGRRVPVIAKLEKPEAVTSLEPIVLAFDAVM VARGDLGVEVPLEEVPLVQKRAIQIARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKDP HNVVRTMARIVRFAETDGRVPDLTHIPRTKRGVISYSARDIAERLNARALVAFTTSGDTAKRVARLHSHLPLLVFTPNEA VRSELALTWGATTFRCPPVSDTDDMMREVDRALLAMPEYNKGDMMVVVAGSPPGVTGNTNMIHVHLLGDDTRIAKL
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=489, Percent_Identity=37.8323108384458, Blast_Score=292, Evalue=5e-79, Organism=Homo sapiens, GI33286422, Length=487, Percent_Identity=37.782340862423, Blast_Score=291, Evalue=1e-78, Organism=Homo sapiens, GI33286420, Length=487, Percent_Identity=37.782340862423, Blast_Score=291, Evalue=1e-78, Organism=Homo sapiens, GI10835121, Length=489, Percent_Identity=36.8098159509202, Blast_Score=275, Evalue=7e-74, Organism=Homo sapiens, GI32967597, Length=489, Percent_Identity=36.8098159509202, Blast_Score=275, Evalue=8e-74, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=38.6759581881533, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=38.6759581881533, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=36.5957446808511, Blast_Score=159, Evalue=7e-39, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=36.5957446808511, Blast_Score=159, Evalue=7e-39, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=35.981308411215, Blast_Score=139, Evalue=8e-33, Organism=Escherichia coli, GI1787965, Length=471, Percent_Identity=40.9766454352442, Blast_Score=334, Evalue=7e-93, Organism=Escherichia coli, GI1788160, Length=475, Percent_Identity=40, Blast_Score=299, Evalue=3e-82, Organism=Caenorhabditis elegans, GI17544584, Length=419, Percent_Identity=39.618138424821, Blast_Score=302, Evalue=3e-82, Organism=Caenorhabditis elegans, GI71984413, Length=482, Percent_Identity=39.6265560165975, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI71984406, Length=482, Percent_Identity=39.6265560165975, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI17506829, Length=482, Percent_Identity=39.6265560165975, Blast_Score=285, Evalue=3e-77, Organism=Caenorhabditis elegans, GI17506831, Length=482, Percent_Identity=39.6265560165975, Blast_Score=285, Evalue=4e-77, Organism=Saccharomyces cerevisiae, GI6319279, Length=481, Percent_Identity=36.7983367983368, Blast_Score=266, Evalue=4e-72, Organism=Saccharomyces cerevisiae, GI6324923, Length=487, Percent_Identity=33.4702258726899, Blast_Score=246, Evalue=8e-66, Organism=Drosophila melanogaster, GI24648964, Length=488, Percent_Identity=37.2950819672131, Blast_Score=285, Evalue=7e-77, Organism=Drosophila melanogaster, GI28571814, Length=488, Percent_Identity=37.2950819672131, Blast_Score=284, Evalue=9e-77, Organism=Drosophila melanogaster, GI24581235, Length=490, Percent_Identity=32.2448979591837, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI24648966, Length=405, Percent_Identity=36.5432098765432, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24646914, Length=276, Percent_Identity=35.5072463768116, Blast_Score=143, Evalue=2e-34,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51655; Mature: 51524
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVDRRTKIVCTLGPAVASADGILRLVEDGMDVARLNFSHGDHPDHEQNYKWVREAAEKT CCCCCCEEEEEEECCHHHCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHC GRAVGILADLQGPKIRLGRFTDGATVWENGETIRITVDDVEGTHDRVSTTYKNLAKDAKP CCEEEEEEECCCCEEEEEEECCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCC GDRLLVDDGKVGLVCVSVEGNDVICEVVEGGPVSNNKGVSLPGMDISVPALSEKDIRDLR CCEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCHHHHHH FALKLGVDFIALSFVRSPADAELVHKIMDEEGRRVPVIAKLEKPEAVTSLEPIVLAFDAV HHHHHCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCHHHHHHHHH MVARGDLGVEVPLEEVPLVQKRAIQIARENAKPVIVATQMLDSMIENSRPTRAEASDVAN HEECCCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHH AVLDGADAVMLSGETSVGKDPHNVVRTMARIVRFAETDGRVPDLTHIPRTKRGVISYSAR HHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHH DIAERLNARALVAFTTSGDTAKRVARLHSHLPLLVFTPNEAVRSELALTWGATTFRCPPV HHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCEEEECCCHHHHHHEEEEECCCEEECCCC SDTDDMMREVDRALLAMPEYNKGDMMVVVAGSPPGVTGNTNMIHVHLLGDDTRIAKL CCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEECCC >Mature Secondary Structure GVDRRTKIVCTLGPAVASADGILRLVEDGMDVARLNFSHGDHPDHEQNYKWVREAAEKT CCCCCEEEEEEECCHHHCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHC GRAVGILADLQGPKIRLGRFTDGATVWENGETIRITVDDVEGTHDRVSTTYKNLAKDAKP CCEEEEEEECCCCEEEEEEECCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCC GDRLLVDDGKVGLVCVSVEGNDVICEVVEGGPVSNNKGVSLPGMDISVPALSEKDIRDLR CCEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCHHHHHH FALKLGVDFIALSFVRSPADAELVHKIMDEEGRRVPVIAKLEKPEAVTSLEPIVLAFDAV HHHHHCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCHHHHHHHHH MVARGDLGVEVPLEEVPLVQKRAIQIARENAKPVIVATQMLDSMIENSRPTRAEASDVAN HEECCCCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHH AVLDGADAVMLSGETSVGKDPHNVVRTMARIVRFAETDGRVPDLTHIPRTKRGVISYSAR HHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHH DIAERLNARALVAFTTSGDTAKRVARLHSHLPLLVFTPNEAVRSELALTWGATTFRCPPV HHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCEEEECCCHHHHHHEEEEECCCEEECCCC SDTDDMMREVDRALLAMPEYNKGDMMVVVAGSPPGVTGNTNMIHVHLLGDDTRIAKL CCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8074528; 12948626 [H]