Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is 145295921
Identifier: 145295921
GI number: 145295921
Start: 2050833
End: 2052413
Strand: Reverse
Name: 145295921
Synonym: cgR_1846
Alternate gene names: NA
Gene position: 2052413-2050833 (Counterclockwise)
Preceding gene: 145295922
Following gene: 145295919
Centisome position: 61.93
GC content: 50.16
Gene sequence:
>1581_bases ATGACTAAAACACTTCTGAAACTACAGCTGACGTTGTGGGGAAGAACTATCAAAGGAAATAAAGCGGCAATAGTGATGAT GTCGCTGATATCTTTTTACGCCTTGATGGGTTTGTTTGGTTTCGGCATCTTTTTGGCACTTGGGCTTGGGCAAGACCACA TGGGCATCCTTGCTGGTGTTGTCTCGGTCGGCATGGTGGCTTATTGCATTGCTGCGTTTATGTGGCCGTCAGGTGAGGGG CAGCTGGATCCGACTGCATTTTCCACCATGCCGCTATCGGCGAAGCAATTATTGCCTGGATTCGCTATCAGTACGCTCCT GCAGTCACGGGGGATTATTGCGGTGATTTGTACGGTGGCGACATCCATTATCGCTGCGGTGTTTTTACCTGTTGGTTCGT GGCCGATGATCGTGTTCATGATGGCGGTATCGCTGGTTACTACGTTGCTTTTGGGTGAGTTGCTTGGGGCGTTGACCTCG GGTTCTTCTTCTAGGGTGAGTAATGATCGCCGTACAGTTCTTACTTCCGTTGTCTTCATGGTGTTTGTTGTTGGCTATAA CACGTTGATTGGCGCGGATGGAATGAGTCGAATCGATGCCATTGGGGCTTATACAAAGTGGACACCATTTGGGGCGGGTG CAGGTGCTATTGAGGCTTTTGCTGTTGGTTTGTGGGGTGAGGCAGGCCTGTTAACATTGCTGGCTTTTGTTTATGTTGCT GCTGGTTTCTGGTTATGGTCACAGCTGATTAATCGCGCGCTCACTGCGCCACTGGACCAAGGTGGGCAAGGGCAAAGCGC TAAAGACATCGCCGGTGAAGGCAAGAAGGTTCTCTTTCTGCCAGGTATTCCTTGGTCAGTTGGAGGTGCCATTTTCTCGA GGTCGCTGCGTTATATGTTCAGGGACTCCAGGTTGTTGGGATCAATGATTGTGTTCCCGCTTCTTGGCGTGCTGTTTATT TTCCAGAGCTTCACCGTTGAGTTTTTCATGATCTATGTTGGGTTGATCATGATGGCAGTGTTCGCAGGATCCGTTGCTAC CAATGATTTTGGCTATGACGGCCCTTCGTTGTGGCTAAATATCGTTGCTGGTGTCAAAGCCCGAACGTTGTTGATGCCCA GGCACTGGGCATCAATGCTGCCGGGAAGTGTGTCAATTGTGGTGTTTATGATCATCACCATTGTGCTCGCGGAGAATAAG ACCACCGCTGTGCTGATCTGTTTTATTGGCCTGGGGATCTTTATCTCCAGTTCGGCTGTAGCGTTGTTGGTCACCACATT TAATCCGTATCCGACTTCTAAGCCAGGCACGAGTCCTTGGGGCGATCGAAGCGGCTATTCCGGTGCTGCGTTTGTGGGAG CATTTGCCGCACTGTTACTGGGATGGATCCCAACGATTCCTACTATCGCATTGGGTATCTTTGGTCTGGTTACCGATCAG ATGTGGATGATCATCCTCGCGGAGGTGCTGGCCATTATTCTCCCAGTAGCTGTGTACATCGGCGTTGCTAAGGTGTGTAT TCGCAAGGTGGAGAAGGATCTTCCGGAGATCTTCGACAAGGTGAAAACTCACGTGAAATAG
Upstream 100 bases:
>100_bases GGTTGGAGGCGCTGCTCTTCAAGAGGGGTCACTATCTTGGTTGGGTGCGTCCGAAGGCCATAGCGAAGGCCAAAATCAGA ACGAGGATCGGGCTGAGTAA
Downstream 100 bases:
>100_bases AAAAATGCGGGTGCTTCGAGAAAATCTCGAAGCACCCGCATTTTCTTTTTGAAAAACTAGCTGTCTAGTTCTTTCGCAGA ATCTGCAGCACGCAGGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter Permease; ABC-Type Transport System Permease Component
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MTKTLLKLQLTLWGRTIKGNKAAIVMMSLISFYALMGLFGFGIFLALGLGQDHMGILAGVVSVGMVAYCIAAFMWPSGEG QLDPTAFSTMPLSAKQLLPGFAISTLLQSRGIIAVICTVATSIIAAVFLPVGSWPMIVFMMAVSLVTTLLLGELLGALTS GSSSRVSNDRRTVLTSVVFMVFVVGYNTLIGADGMSRIDAIGAYTKWTPFGAGAGAIEAFAVGLWGEAGLLTLLAFVYVA AGFWLWSQLINRALTAPLDQGGQGQSAKDIAGEGKKVLFLPGIPWSVGGAIFSRSLRYMFRDSRLLGSMIVFPLLGVLFI FQSFTVEFFMIYVGLIMMAVFAGSVATNDFGYDGPSLWLNIVAGVKARTLLMPRHWASMLPGSVSIVVFMIITIVLAENK TTAVLICFIGLGIFISSSAVALLVTTFNPYPTSKPGTSPWGDRSGYSGAAFVGAFAALLLGWIPTIPTIALGIFGLVTDQ MWMIILAEVLAIILPVAVYIGVAKVCIRKVEKDLPEIFDKVKTHVK
Sequences:
>Translated_526_residues MTKTLLKLQLTLWGRTIKGNKAAIVMMSLISFYALMGLFGFGIFLALGLGQDHMGILAGVVSVGMVAYCIAAFMWPSGEG QLDPTAFSTMPLSAKQLLPGFAISTLLQSRGIIAVICTVATSIIAAVFLPVGSWPMIVFMMAVSLVTTLLLGELLGALTS GSSSRVSNDRRTVLTSVVFMVFVVGYNTLIGADGMSRIDAIGAYTKWTPFGAGAGAIEAFAVGLWGEAGLLTLLAFVYVA AGFWLWSQLINRALTAPLDQGGQGQSAKDIAGEGKKVLFLPGIPWSVGGAIFSRSLRYMFRDSRLLGSMIVFPLLGVLFI FQSFTVEFFMIYVGLIMMAVFAGSVATNDFGYDGPSLWLNIVAGVKARTLLMPRHWASMLPGSVSIVVFMIITIVLAENK TTAVLICFIGLGIFISSSAVALLVTTFNPYPTSKPGTSPWGDRSGYSGAAFVGAFAALLLGWIPTIPTIALGIFGLVTDQ MWMIILAEVLAIILPVAVYIGVAKVCIRKVEKDLPEIFDKVKTHVK >Mature_525_residues TKTLLKLQLTLWGRTIKGNKAAIVMMSLISFYALMGLFGFGIFLALGLGQDHMGILAGVVSVGMVAYCIAAFMWPSGEGQ LDPTAFSTMPLSAKQLLPGFAISTLLQSRGIIAVICTVATSIIAAVFLPVGSWPMIVFMMAVSLVTTLLLGELLGALTSG SSSRVSNDRRTVLTSVVFMVFVVGYNTLIGADGMSRIDAIGAYTKWTPFGAGAGAIEAFAVGLWGEAGLLTLLAFVYVAA GFWLWSQLINRALTAPLDQGGQGQSAKDIAGEGKKVLFLPGIPWSVGGAIFSRSLRYMFRDSRLLGSMIVFPLLGVLFIF QSFTVEFFMIYVGLIMMAVFAGSVATNDFGYDGPSLWLNIVAGVKARTLLMPRHWASMLPGSVSIVVFMIITIVLAENKT TAVLICFIGLGIFISSSAVALLVTTFNPYPTSKPGTSPWGDRSGYSGAAFVGAFAALLLGWIPTIPTIALGIFGLVTDQM WMIILAEVLAIILPVAVYIGVAKVCIRKVEKDLPEIFDKVKTHVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56075; Mature: 55944
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTLLKLQLTLWGRTIKGNKAAIVMMSLISFYALMGLFGFGIFLALGLGQDHMGILAGV CCCHHHEEEHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VSVGMVAYCIAAFMWPSGEGQLDPTAFSTMPLSAKQLLPGFAISTLLQSRGIIAVICTVA HHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHH TSIIAAVFLPVGSWPMIVFMMAVSLVTTLLLGELLGALTSGSSSRVSNDRRTVLTSVVFM HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHH VFVVGYNTLIGADGMSRIDAIGAYTKWTPFGAGAGAIEAFAVGLWGEAGLLTLLAFVYVA HHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH AGFWLWSQLINRALTAPLDQGGQGQSAKDIAGEGKKVLFLPGIPWSVGGAIFSRSLRYMF HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH RDSRLLGSMIVFPLLGVLFIFQSFTVEFFMIYVGLIMMAVFAGSVATNDFGYDGPSLWLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH IVAGVKARTLLMPRHWASMLPGSVSIVVFMIITIVLAENKTTAVLICFIGLGIFISSSAV HHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC ALLVTTFNPYPTSKPGTSPWGDRSGYSGAAFVGAFAALLLGWIPTIPTIALGIFGLVTDQ EEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MWMIILAEVLAIILPVAVYIGVAKVCIRKVEKDLPEIFDKVKTHVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKTLLKLQLTLWGRTIKGNKAAIVMMSLISFYALMGLFGFGIFLALGLGQDHMGILAGV CCHHHEEEHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VSVGMVAYCIAAFMWPSGEGQLDPTAFSTMPLSAKQLLPGFAISTLLQSRGIIAVICTVA HHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHCCHHHHHHHHHHCCHHHHHHHHH TSIIAAVFLPVGSWPMIVFMMAVSLVTTLLLGELLGALTSGSSSRVSNDRRTVLTSVVFM HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHH VFVVGYNTLIGADGMSRIDAIGAYTKWTPFGAGAGAIEAFAVGLWGEAGLLTLLAFVYVA HHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH AGFWLWSQLINRALTAPLDQGGQGQSAKDIAGEGKKVLFLPGIPWSVGGAIFSRSLRYMF HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH RDSRLLGSMIVFPLLGVLFIFQSFTVEFFMIYVGLIMMAVFAGSVATNDFGYDGPSLWLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH IVAGVKARTLLMPRHWASMLPGSVSIVVFMIITIVLAENKTTAVLICFIGLGIFISSSAV HHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC ALLVTTFNPYPTSKPGTSPWGDRSGYSGAAFVGAFAALLLGWIPTIPTIALGIFGLVTDQ EEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MWMIILAEVLAIILPVAVYIGVAKVCIRKVEKDLPEIFDKVKTHVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA