Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is groES [H]
Identifier: 145294767
GI number: 145294767
Start: 776253
End: 776552
Strand: Direct
Name: groES [H]
Synonym: cgR_0715
Alternate gene names: 145294767
Gene position: 776253-776552 (Clockwise)
Preceding gene: 145294766
Following gene: 145294768
Centisome position: 23.42
GC content: 55.0
Gene sequence:
>300_bases GTGGCAAACGTCAACATCAAGCCGCTTGAGGACAAGATCCTCGTTCAGATCAACGAAGCAGAGACCACCACCGCTTCCGG CCTGGTCATTCCAGATTCCGCTAAGGAAAAGCCACAAGAGGCAACCGTTATCGCAGTTGGCCCAGGCCGCTTCGATGACA AGGGTAACCGCATCCCACTGGACATCAAGGAAGATGACGTTGTGATCTTCTCCCGTTACGGTGGCACCGAGATCAAGTTC GGTGGCGTGGAGTACTTGCTCCTCTCCGCTCGTGACATCCTCGCAATCGTCGAGAAGTAG
Upstream 100 bases:
>100_bases CAAATAGGTTGTTTGACACACAGTTGTTCACCCGCGACGACGGCTGTGCTGGAAACCCACAACCGGCACACACAAAATTT TTCTCATGGAGGGATTCATC
Downstream 100 bases:
>100_bases GGGATAAGTTCATGGCAAAGCTCATTGCTTTTGACCAGGACGCCCGCGAAGGCATTCTCCGGGGCGTCGACGCTCTGGCA AACGCTGTCAAGGTAACCCT
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein; Protein Cpn10 [H]
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MANVNIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDDKGNRIPLDIKEDDVVIFSRYGGTEIKF GGVEYLLLSARDILAIVEK
Sequences:
>Translated_99_residues MANVNIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDDKGNRIPLDIKEDDVVIFSRYGGTEIKF GGVEYLLLSARDILAIVEK >Mature_98_residues ANVNIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDDKGNRIPLDIKEDDVVIFSRYGGTEIKFG GVEYLLLSARDILAIVEK
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family [H]
Homologues:
Organism=Escherichia coli, GI1790585, Length=96, Percent_Identity=44.7916666666667, Blast_Score=75, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17555568, Length=94, Percent_Identity=35.1063829787234, Blast_Score=66, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324594, Length=96, Percent_Identity=41.6666666666667, Blast_Score=69, Evalue=1e-13, Organism=Drosophila melanogaster, GI21356029, Length=97, Percent_Identity=44.3298969072165, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI21358317, Length=102, Percent_Identity=38.2352941176471, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 [H]
Pfam domain/function: PF00166 Cpn10 [H]
EC number: NA
Molecular weight: Translated: 10769; Mature: 10638
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVNIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDDKGNRIPL CCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEE DIKEDDVVIFSRYGGTEIKFGGVEYLLLSARDILAIVEK EECCCCEEEEECCCCCEEEECCEEEEEEECCCEEEEECC >Mature Secondary Structure ANVNIKPLEDKILVQINEAETTTASGLVIPDSAKEKPQEATVIAVGPGRFDDKGNRIPL CCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEE DIKEDDVVIFSRYGGTEIKFGGVEYLLLSARDILAIVEK EECCCCEEEEECCCCCEEEECCEEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]