Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is map [H]
Identifier: 145294723
GI number: 145294723
Start: 728852
End: 729646
Strand: Direct
Name: map [H]
Synonym: cgR_0671
Alternate gene names: 145294723
Gene position: 728852-729646 (Clockwise)
Preceding gene: 145294722
Following gene: 145294724
Centisome position: 21.99
GC content: 60.5
Gene sequence:
>795_bases ATGGGTTTCCGTTCCAAGAAGAAGGTTATTGCGGCAAAGACCGCCGCTGAGCTGGACGCGATGCAGGCGGCGGGTGAGAT CGTCGGCAAGGCTTTGCAGGCTGTGCGCGCTGAGGCTAAAGCTGGCATGAGCACGTGGGATCTGGATCAGATCGCGGAGC AGGTTATCCGCGATGCTGGCGCCGTTCCTACATTCCTGGGTTACCAGGGTTTTCCGGCATCAGTGTGCGCTTCGGTCAAT GAGGTGATTGTTCACGGCATTCCATCCAAGGAGACCATCTTGGAGGAAGGCGATCTGGTGTCCATCGACTGCGGCGCAAC CTTTGATGGTTGGGTCGGCGATTCCGCGTGGAGCTTCGGCATCGGCGAGCTGGACGAGGACGTCCAGGGTCTCAACTTGG CTACCGAGTGGGTCCTCATGGAAGGCATGAAGGCCATGGTTCCAGGCAACCGTTTGACCGATGTCTCCCACGCTCTCGAG GTCGCAACCCGCAAGGCTGAGTCCAAGTTCGGCGTCGTGCTTGGCATCGTCGATGGCTACGGCGGACACGGCATTGGCCG CCACATGCACGAGGAGCCATACTTGGCTAATGAGGGCAAGGCTGGCAAGGGCCCTGTGATTCAGGAGGGCTCCGTGCTCG CCATCGAGCCTATGCTCACCCTCGGCACCGAAGATTCCGCAGTGCTGGAAGATGATTGGACTGTCGTGACCCTCGACGGT TCATGGGCAGCGCACTGGGAGCACACCGTTGCAGCCACCAAGGGCGGCCCGCGCATCCTCACCCCGCGTTATTAA
Upstream 100 bases:
>100_bases GTGGAAGCACTCACCTCAAGGTGGCCGGAACCGCATGCATTGTGCGGTGCCGGCCACCTTTGGTTTTAACAGTTTAATTT GAAGAAAGAGACGTGGAAGC
Downstream 100 bases:
>100_bases AATGATGCTTTTCGACGCATCCCCGCGTTTTCGGGGCTAAAAGTTGCCCGGTTGAGCAAAGGTTTGCGACCTCCCCGGCG TGCCGCCAGGGGAGGAGGCG
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MGFRSKKKVIAAKTAAELDAMQAAGEIVGKALQAVRAEAKAGMSTWDLDQIAEQVIRDAGAVPTFLGYQGFPASVCASVN EVIVHGIPSKETILEEGDLVSIDCGATFDGWVGDSAWSFGIGELDEDVQGLNLATEWVLMEGMKAMVPGNRLTDVSHALE VATRKAESKFGVVLGIVDGYGGHGIGRHMHEEPYLANEGKAGKGPVIQEGSVLAIEPMLTLGTEDSAVLEDDWTVVTLDG SWAAHWEHTVAATKGGPRILTPRY
Sequences:
>Translated_264_residues MGFRSKKKVIAAKTAAELDAMQAAGEIVGKALQAVRAEAKAGMSTWDLDQIAEQVIRDAGAVPTFLGYQGFPASVCASVN EVIVHGIPSKETILEEGDLVSIDCGATFDGWVGDSAWSFGIGELDEDVQGLNLATEWVLMEGMKAMVPGNRLTDVSHALE VATRKAESKFGVVLGIVDGYGGHGIGRHMHEEPYLANEGKAGKGPVIQEGSVLAIEPMLTLGTEDSAVLEDDWTVVTLDG SWAAHWEHTVAATKGGPRILTPRY >Mature_263_residues GFRSKKKVIAAKTAAELDAMQAAGEIVGKALQAVRAEAKAGMSTWDLDQIAEQVIRDAGAVPTFLGYQGFPASVCASVNE VIVHGIPSKETILEEGDLVSIDCGATFDGWVGDSAWSFGIGELDEDVQGLNLATEWVLMEGMKAMVPGNRLTDVSHALEV ATRKAESKFGVVLGIVDGYGGHGIGRHMHEEPYLANEGKAGKGPVIQEGSVLAIEPMLTLGTEDSAVLEDDWTVVTLDGS WAAHWEHTVAATKGGPRILTPRY
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI40385867, Length=259, Percent_Identity=32.8185328185328, Blast_Score=137, Evalue=9e-33, Organism=Homo sapiens, GI164420681, Length=254, Percent_Identity=31.496062992126, Blast_Score=135, Evalue=4e-32, Organism=Escherichia coli, GI1786364, Length=255, Percent_Identity=34.9019607843137, Blast_Score=161, Evalue=4e-41, Organism=Caenorhabditis elegans, GI71996291, Length=258, Percent_Identity=32.1705426356589, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6323273, Length=248, Percent_Identity=32.6612903225806, Blast_Score=137, Evalue=2e-33, Organism=Drosophila melanogaster, GI24583427, Length=249, Percent_Identity=32.1285140562249, Blast_Score=143, Evalue=1e-34, Organism=Drosophila melanogaster, GI21355531, Length=247, Percent_Identity=31.9838056680162, Blast_Score=139, Evalue=3e-33,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 27973; Mature: 27842
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFRSKKKVIAAKTAAELDAMQAAGEIVGKALQAVRAEAKAGMSTWDLDQIAEQVIRDAG CCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC AVPTFLGYQGFPASVCASVNEVIVHGIPSKETILEEGDLVSIDCGATFDGWVGDSAWSFG CCCHHHCCCCCCHHHHHHHHHHHEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC IGELDEDVQGLNLATEWVLMEGMKAMVPGNRLTDVSHALEVATRKAESKFGVVLGIVDGY CCCCCHHHHCCHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC GGHGIGRHMHEEPYLANEGKAGKGPVIQEGSVLAIEPMLTLGTEDSAVLEDDWTVVTLDG CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCEEEECCCCCEEEECCCEEEEECC SWAAHWEHTVAATKGGPRILTPRY CEEECCCEEEEECCCCCEECCCCC >Mature Secondary Structure GFRSKKKVIAAKTAAELDAMQAAGEIVGKALQAVRAEAKAGMSTWDLDQIAEQVIRDAG CCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC AVPTFLGYQGFPASVCASVNEVIVHGIPSKETILEEGDLVSIDCGATFDGWVGDSAWSFG CCCHHHCCCCCCHHHHHHHHHHHEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC IGELDEDVQGLNLATEWVLMEGMKAMVPGNRLTDVSHALEVATRKAESKFGVVLGIVDGY CCCCCHHHHCCHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC GGHGIGRHMHEEPYLANEGKAGKGPVIQEGSVLAIEPMLTLGTEDSAVLEDDWTVVTLDG CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCEEEECCCCCEEEECCCEEEEECC SWAAHWEHTVAATKGGPRILTPRY CEEECCCEEEEECCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]