Definition | Corynebacterium glutamicum R chromosome, complete genome. |
---|---|
Accession | NC_009342 |
Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is ytoQ [H]
Identifier: 145294588
GI number: 145294588
Start: 599297
End: 599968
Strand: Direct
Name: ytoQ [H]
Synonym: cgR_0539
Alternate gene names: 145294588
Gene position: 599297-599968 (Clockwise)
Preceding gene: 145294584
Following gene: 145294591
Centisome position: 18.08
GC content: 67.71
Gene sequence:
>672_bases GTGGCCTTGAGCTTCAACGTTTACCTGTCCGGCGAGATCCACACCGACTGGCGAGAAGAGATCCAGCGCGGCGCGGAGGC CGCCGGGCTCGACGTCGTCTTCACCGCGCCGGTGACCGATCACCCTGCCAGCGACGCCGCCGGCGACCACCTGGGTGAGG CACCCGCGGGCTTTTGGCGCGATCACCAGTCCTCGAAGGTCAACTCCATCCGCACCCGCTCCCTGATCGAGAAGGCCGAC ATGGTCGTCGTCCGCTTCGGGGATCAGTACAAGCAGTGGAACGCCGCCTTCGACGCGGGTTACTGTGCGGCACTGGACAA GCCTTATGCCACGCTGCATGGCGAGGACATCGTCCACCCGCTCAAGGAAGTCGACGCCGCCGCGCAGGCGGGGTGCACCA CCACCGACCAGGTCGTCGAGATCCTGCGTTACATGCTCGAAGCCGAAGAAGCACTCCTCAGCTGCGCTAGCCCTCTAAGC AGGCAGGCGCAGCGTCACGGCGAGCCCACCTTGAGCCCGCGGCCTGAGTTCCACCGAACCGCCGTGGGCTTTCGCAATTG CATCGACGATCGCCAGCCCCAGGCCTTGGCCTGCCCCCGCGGTCCGCTGCGCCCGTGCGAAGGGCTCCACCCACGTGCGG ACCTCCGCCGCGTCCAGCTGCGGCCCACCTGA
Upstream 100 bases:
>100_bases CCTACCTGACAACGGAGGGTAATACCATTGGCGAGATCGAGCAGATTTCCCTCACACATCCGCGTAAACTCCAAGGTCAA TGCCCAAAAATTAAGGAGAA
Downstream 100 bases:
>100_bases CTCTACGGTGATCTCTGCGTTCCGACCCGCCTGTGCCACCGTCACGGACGGATCTTCGCCGTGGGTGAGCCCGTTGCACA CCATGTTCTCCACTGCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MALSFNVYLSGEIHTDWREEIQRGAEAAGLDVVFTAPVTDHPASDAAGDHLGEAPAGFWRDHQSSKVNSIRTRSLIEKAD MVVVRFGDQYKQWNAAFDAGYCAALDKPYATLHGEDIVHPLKEVDAAAQAGCTTTDQVVEILRYMLEAEEALLSCASPLS RQAQRHGEPTLSPRPEFHRTAVGFRNCIDDRQPQALACPRGPLRPCEGLHPRADLRRVQLRPT
Sequences:
>Translated_223_residues MALSFNVYLSGEIHTDWREEIQRGAEAAGLDVVFTAPVTDHPASDAAGDHLGEAPAGFWRDHQSSKVNSIRTRSLIEKAD MVVVRFGDQYKQWNAAFDAGYCAALDKPYATLHGEDIVHPLKEVDAAAQAGCTTTDQVVEILRYMLEAEEALLSCASPLS RQAQRHGEPTLSPRPEFHRTAVGFRNCIDDRQPQALACPRGPLRPCEGLHPRADLRRVQLRPT >Mature_222_residues ALSFNVYLSGEIHTDWREEIQRGAEAAGLDVVFTAPVTDHPASDAAGDHLGEAPAGFWRDHQSSKVNSIRTRSLIEKADM VVVRFGDQYKQWNAAFDAGYCAALDKPYATLHGEDIVHPLKEVDAAAQAGCTTTDQVVEILRYMLEAEEALLSCASPLSR QAQRHGEPTLSPRPEFHRTAVGFRNCIDDRQPQALACPRGPLRPCEGLHPRADLRRVQLRPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019884 [H]
Pfam domain/function: PF11071 DUF2872 [H]
EC number: NA
Molecular weight: Translated: 24639; Mature: 24508
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSFNVYLSGEIHTDWREEIQRGAEAAGLDVVFTAPVTDHPASDAAGDHLGEAPAGFWR CEEEEEEEEECCCCCHHHHHHHHCCHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHH DHQSSKVNSIRTRSLIEKADMVVVRFGDQYKQWNAAFDAGYCAALDKPYATLHGEDIVHP CCCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHCCCHHHHCCCCHHHHCCHHHHHH LKEVDAAAQAGCTTTDQVVEILRYMLEAEEALLSCASPLSRQAQRHGEPTLSPRPEFHRT HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH AVGFRNCIDDRQPQALACPRGPLRPCEGLHPRADLRRVQLRPT HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHEEECCCC >Mature Secondary Structure ALSFNVYLSGEIHTDWREEIQRGAEAAGLDVVFTAPVTDHPASDAAGDHLGEAPAGFWR EEEEEEEEECCCCCHHHHHHHHCCHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHH DHQSSKVNSIRTRSLIEKADMVVVRFGDQYKQWNAAFDAGYCAALDKPYATLHGEDIVHP CCCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHCCCHHHHCCCCHHHHCCHHHHHH LKEVDAAAQAGCTTTDQVVEILRYMLEAEEALLSCASPLSRQAQRHGEPTLSPRPEFHRT HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH AVGFRNCIDDRQPQALACPRGPLRPCEGLHPRADLRRVQLRPT HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]