Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is lly [H]
Identifier: 145294541
GI number: 145294541
Start: 549294
End: 551150
Strand: Direct
Name: lly [H]
Synonym: cgR_0493
Alternate gene names: 145294541
Gene position: 549294-551150 (Clockwise)
Preceding gene: 145294540
Following gene: 145294542
Centisome position: 16.57
GC content: 54.98
Gene sequence:
>1857_bases ATGCGTACATCCATTGCCACTGTTTGTTTGTCCGGAACTCTTGCTGAAAAGCTGCGCGCAGCTGCAGATGCTGGATTTGA TGGTGTGGAAATCTTCGAGCAGGACTTGGTGGTTTCCCCGCATTCGGCAGAGCAGATTCGTCAGCGGGCTCAGGATTTGG GATTAACCCTGGATCTGTTCCAGCCGTTTCGAGATTTCGAAGGTGTGGAAGAAGAGCAGTTTCTGAAGAATCTGCACCGC TTGGAAGAGAAGTTCAAGCTGATGAACAGGCTTGGCATTGAGATGATCTTGTTGTGTTCCAATGTGGGCACCGCGACCAT CAATGATGATGACCTTTTCGTGGAGCAGTTGCATCGTGCAGCAGATTTGGCTGAGAAGTACAACGTCAAGATTGCTTATG AAGCGTTGGCGTGGGGCAAGTTTGTCAATGATTTTGAGCATGCGCATGCACTTGTGGAGAAGGTGAATCACAAGGCGCTG GGAACCTGCTTGGATACGTTCCATATTCTTTCCCGTGGTTGGGAAACCGACGAGGTGGAAAACATCCCGGCGGAGAAGAT CTTCTTTGTTCAGTTGGCGGATGCACCGAAGCTGAGCATGGACATTTTGTCCTGGTCGCGTCACCACCGTGTTTTCCCTG GTGAAGGCGATTTCGATCTGGTGAAATTCATGGTTCATCTGGCCAAGACGGGTTATGATGGCCCGATTTCTTTGGAGATC TTCAACGATTCCTTCCGCAAGGCCGAGGTTGGTCGCACCGCGATTGATGGGTTGCGTTCTTTGCGTTGGTTGGAAGATCA GACCTGGCATGCGCTAAATGCTGAGGATCGTCCAAGCGCACTAGAGCTGCGTGCACTTCCTGAGGTCGCGGAACCTGAAG GCGTTGATTTCATTGAGATCGCCACTGGACGTTTGGGTGAGACCATTCGGGTTCTTCATCAATTGGGTTTCCGCTTGGGT GGTCATCACTGCAGTAAGCAGGATTACCAGGTATGGACCCAGGGCGATGTGCGCATTGTGGTGTGTGATCGTGGGGCCAC CGGGGCTCCAACCACGATCTCTGCGATGGGCTTTGACACCCCTGATCCAGAAGCCGCGCATGCCCGTGCGGAATTGCTGC GGGCTCAGACAATTGATCGTCCCCACATCGAGGGTGAAGTTGACCTTAAAGGTGTGTACGCGCCGGATGGGGTGGAGCTG TTTTTCGCGGGGCCGAGCCCCGATGGAATGCCCGAGTGGCTGCCGGAATTCGGCGTCGAAAAGCAAGAAGCTGGTCTCAT TGAAGCCATCGACCACGTCAATTTCGCCCAGCCATGGCAACATTTTGATGAGGCAGTGCTGTTTTACACCGCGCTGATGG CGTTAGAGACTGTGCGTGAGGATGAGTTCCCGAGCCCAATTGGTTTGGTGCGCAATCAGGTGATGCGTTCGCCGAATGAT GCGGTGCGGTTGCTGCTCAGCGTGGCGCCGGAGGACGGTGAGCAGGGAGATTTCCTCAACGCGGCCTACCCGGAGCACAT TGCGTTGGCCACGGCGGACATCGTGGCGGTGGCTGAACGTGCGCGCAAACGAGGCCTGGATTTCTTGCCCGTCCCAGAGA ATTACTACGACGATGTGCAGGCGCGTTTTGATTTGCCGCAGGAATTCTTGGACACACTCAAGGAAAACCACCTGCTTTAC GACTGCGACGAGAACGGCGAATTCCTCCACTTTTACACCCGCACGTTGGGCACGCTGTTCTTCGAAGTGGTGGAACGCCG CGGCGGTTTTGCAGGTTGGGGCGAAACAAACGCTCCGGTGCGGTTAGCGGCGCAGTATCGTGAGGTGCGGGACCTCGAGC GGGGAATCCCCAACTAG
Upstream 100 bases:
>100_bases GTGGTGAGGCCGCAGACCTGGCAGCCGCAAACAAAGCCTCCGAGGCCCAACTCGCGGCTAAGTAAAATCACGTAACCAAA GAAAAGGACTCTTTGACCAC
Downstream 100 bases:
>100_bases CATCCCGAACTAGCCCCCCCAACAACAATTAGAAAAGGAACCTAAAATGCTTGGAAAAATTCTCCTCCTCAACGGCCCAA ACCTGAACATGCTGGGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: 4HPPD; HPD; HPPDase; Legiolysin [H]
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MRTSIATVCLSGTLAEKLRAAADAGFDGVEIFEQDLVVSPHSAEQIRQRAQDLGLTLDLFQPFRDFEGVEEEQFLKNLHR LEEKFKLMNRLGIEMILLCSNVGTATINDDDLFVEQLHRAADLAEKYNVKIAYEALAWGKFVNDFEHAHALVEKVNHKAL GTCLDTFHILSRGWETDEVENIPAEKIFFVQLADAPKLSMDILSWSRHHRVFPGEGDFDLVKFMVHLAKTGYDGPISLEI FNDSFRKAEVGRTAIDGLRSLRWLEDQTWHALNAEDRPSALELRALPEVAEPEGVDFIEIATGRLGETIRVLHQLGFRLG GHHCSKQDYQVWTQGDVRIVVCDRGATGAPTTISAMGFDTPDPEAAHARAELLRAQTIDRPHIEGEVDLKGVYAPDGVEL FFAGPSPDGMPEWLPEFGVEKQEAGLIEAIDHVNFAQPWQHFDEAVLFYTALMALETVREDEFPSPIGLVRNQVMRSPND AVRLLLSVAPEDGEQGDFLNAAYPEHIALATADIVAVAERARKRGLDFLPVPENYYDDVQARFDLPQEFLDTLKENHLLY DCDENGEFLHFYTRTLGTLFFEVVERRGGFAGWGETNAPVRLAAQYREVRDLERGIPN
Sequences:
>Translated_618_residues MRTSIATVCLSGTLAEKLRAAADAGFDGVEIFEQDLVVSPHSAEQIRQRAQDLGLTLDLFQPFRDFEGVEEEQFLKNLHR LEEKFKLMNRLGIEMILLCSNVGTATINDDDLFVEQLHRAADLAEKYNVKIAYEALAWGKFVNDFEHAHALVEKVNHKAL GTCLDTFHILSRGWETDEVENIPAEKIFFVQLADAPKLSMDILSWSRHHRVFPGEGDFDLVKFMVHLAKTGYDGPISLEI FNDSFRKAEVGRTAIDGLRSLRWLEDQTWHALNAEDRPSALELRALPEVAEPEGVDFIEIATGRLGETIRVLHQLGFRLG GHHCSKQDYQVWTQGDVRIVVCDRGATGAPTTISAMGFDTPDPEAAHARAELLRAQTIDRPHIEGEVDLKGVYAPDGVEL FFAGPSPDGMPEWLPEFGVEKQEAGLIEAIDHVNFAQPWQHFDEAVLFYTALMALETVREDEFPSPIGLVRNQVMRSPND AVRLLLSVAPEDGEQGDFLNAAYPEHIALATADIVAVAERARKRGLDFLPVPENYYDDVQARFDLPQEFLDTLKENHLLY DCDENGEFLHFYTRTLGTLFFEVVERRGGFAGWGETNAPVRLAAQYREVRDLERGIPN >Mature_618_residues MRTSIATVCLSGTLAEKLRAAADAGFDGVEIFEQDLVVSPHSAEQIRQRAQDLGLTLDLFQPFRDFEGVEEEQFLKNLHR LEEKFKLMNRLGIEMILLCSNVGTATINDDDLFVEQLHRAADLAEKYNVKIAYEALAWGKFVNDFEHAHALVEKVNHKAL GTCLDTFHILSRGWETDEVENIPAEKIFFVQLADAPKLSMDILSWSRHHRVFPGEGDFDLVKFMVHLAKTGYDGPISLEI FNDSFRKAEVGRTAIDGLRSLRWLEDQTWHALNAEDRPSALELRALPEVAEPEGVDFIEIATGRLGETIRVLHQLGFRLG GHHCSKQDYQVWTQGDVRIVVCDRGATGAPTTISAMGFDTPDPEAAHARAELLRAQTIDRPHIEGEVDLKGVYAPDGVEL FFAGPSPDGMPEWLPEFGVEKQEAGLIEAIDHVNFAQPWQHFDEAVLFYTALMALETVREDEFPSPIGLVRNQVMRSPND AVRLLLSVAPEDGEQGDFLNAAYPEHIALATADIVAVAERARKRGLDFLPVPENYYDDVQARFDLPQEFLDTLKENHLLY DCDENGEFLHFYTRTLGTLFFEVVERRGGFAGWGETNAPVRLAAQYREVRDLERGIPN
Specific function: Catalyzes the transformation of p-hydroxyphenylpyruvate into HGA. Has hemolytic and brown pigment production activity [H]
COG id: COG3185
COG function: function code ER; 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4HPPD family [H]
Homologues:
Organism=Homo sapiens, GI285002264, Length=211, Percent_Identity=27.9620853080569, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI4504477, Length=211, Percent_Identity=27.9620853080569, Blast_Score=72, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17555220, Length=228, Percent_Identity=25.8771929824561, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI21356105, Length=203, Percent_Identity=26.1083743842365, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24667510, Length=203, Percent_Identity=26.1083743842365, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005956 - InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.27 [H]
Molecular weight: Translated: 69522; Mature: 69522
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSIATVCLSGTLAEKLRAAADAGFDGVEIFEQDLVVSPHSAEQIRQRAQDLGLTLDLF CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEECCCCHHHHHHHHHHCCCCHHHH QPFRDFEGVEEEQFLKNLHRLEEKFKLMNRLGIEMILLCSNVGTATINDDDLFVEQLHRA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCHHHHHHHHHHH ADLAEKYNVKIAYEALAWGKFVNDFEHAHALVEKVNHKALGTCLDTFHILSRGWETDEVE HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC NIPAEKIFFVQLADAPKLSMDILSWSRHHRVFPGEGDFDLVKFMVHLAKTGYDGPISLEI CCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE FNDSFRKAEVGRTAIDGLRSLRWLEDQTWHALNAEDRPSALELRALPEVAEPEGVDFIEI ECCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCEEEE ATGRLGETIRVLHQLGFRLGGHHCSKQDYQVWTQGDVRIVVCDRGATGAPTTISAMGFDT CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEECCCCC PDPEAAHARAELLRAQTIDRPHIEGEVDLKGVYAPDGVELFFAGPSPDGMPEWLPEFGVE CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHCCC KQEAGLIEAIDHVNFAQPWQHFDEAVLFYTALMALETVREDEFPSPIGLVRNQVMRSPND HHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH AVRLLLSVAPEDGEQGDFLNAAYPEHIALATADIVAVAERARKRGLDFLPVPENYYDDVQ HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH ARFDLPQEFLDTLKENHLLYDCDENGEFLHFYTRTLGTLFFEVVERRGGFAGWGETNAPV HHHCCCHHHHHHHHHCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH RLAAQYREVRDLERGIPN HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRTSIATVCLSGTLAEKLRAAADAGFDGVEIFEQDLVVSPHSAEQIRQRAQDLGLTLDLF CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEECCCCHHHHHHHHHHCCCCHHHH QPFRDFEGVEEEQFLKNLHRLEEKFKLMNRLGIEMILLCSNVGTATINDDDLFVEQLHRA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCHHHHHHHHHHH ADLAEKYNVKIAYEALAWGKFVNDFEHAHALVEKVNHKALGTCLDTFHILSRGWETDEVE HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC NIPAEKIFFVQLADAPKLSMDILSWSRHHRVFPGEGDFDLVKFMVHLAKTGYDGPISLEI CCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE FNDSFRKAEVGRTAIDGLRSLRWLEDQTWHALNAEDRPSALELRALPEVAEPEGVDFIEI ECCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCEEEE ATGRLGETIRVLHQLGFRLGGHHCSKQDYQVWTQGDVRIVVCDRGATGAPTTISAMGFDT CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEECCCCC PDPEAAHARAELLRAQTIDRPHIEGEVDLKGVYAPDGVELFFAGPSPDGMPEWLPEFGVE CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHCCC KQEAGLIEAIDHVNFAQPWQHFDEAVLFYTALMALETVREDEFPSPIGLVRNQVMRSPND HHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH AVRLLLSVAPEDGEQGDFLNAAYPEHIALATADIVAVAERARKRGLDFLPVPENYYDDVQ HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH ARFDLPQEFLDTLKENHLLYDCDENGEFLHFYTRTLGTLFFEVVERRGGFAGWGETNAPV HHHCCCHHHHHHHHHCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH RLAAQYREVRDLERGIPN HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA