Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is senX3 [H]
Identifier: 145294520
GI number: 145294520
Start: 531027
End: 532268
Strand: Direct
Name: senX3 [H]
Synonym: cgR_0475
Alternate gene names: 145294520
Gene position: 531027-532268 (Clockwise)
Preceding gene: 145294519
Following gene: 145294521
Centisome position: 16.02
GC content: 57.33
Gene sequence:
>1242_bases GTGAGCACTCTTCTTGCTTTCGTATTGGGCGTGGTCCTCATGGGCCTCGCCCTACCTGCGTATACGAAAATTAAAGATCG GATGCGTCGCCACAAGTCCGCGGTCACCCTGTCCGAAAATCAGGTCACCACGGTGGGGCAGGTCCTCCACCTGGCGATTC AAGGCTCCCCAACGGGAATCACGGTTGTCGATCGCACCGGCGACGTCATCTTATCCAACGGCCGCGCCCACGAATTGGGC ATCGTCCACGAAAGATCCGTCGACGGCAACGTTTGGCGCGTCGCCCAGGAAGCCTTCCAAGACCAAGAAACCCACTCACT CGACGTCCACCCAGACCGCAATCCGCGGCGCCCGGGTAGTCGCATCACCGCAGTGCAGGCAGTGGTCAAGCCTTTAACGC TTATCGACGATCGTTTCGTGATCATCTATGCCTCCGACGAATCCGAAAACGTGCGCATGGAATCGGCACGCCGAGACTTC GTCGCAAACGTCTCCCACGAACTGAAAACCCCCGTCGGCGGCATGGCACTCCTCGCGGAAGCCCTCATGGAATCCTCCGA CGACCCAGAACAAGTCGAATACTTCGGATCCAGGCTCCACCGCGAAGCCCACCGCATGGCCGACATGATCAACGAACTGA TCTCCCTTTCCAAACTTCAGGGCGCCGAACGACTCCCTGATATGGAACCCGTCCAGGCTGACGACATCATCAGCGAAGCC ATCGAACGCACCCAACTCGCCGCCGACAACGCCAACATCGAAATCATTCGCGGCGACCGCACCGGCGTTTGGGTAGAAGC CGATCGATCCCTGCTGGTCACAGCCCTGGCGAACCTGATCAGCAATGCAATCAACTACTCACCAAAATCAGTTCCCGTCT CCGTTTCACAAAGCATCCGAAACGACGTGGTCATGATCCGAGTAACCGACCGCGGCATTGGCATCGCACCCGAAGACCAA GGCCGAGTTTTCGAAAGATTCTTCCGCGTCGACAAAGCCCGCTCCCGCCAAACCGGCGGAACTGGCCTTGGCCTCGCGAT AGTCAAACATGTCATGGCCAACCATGGCGGTAGTATTAGTTTGTGGTCACGTCCTGGAACAGGCTCCACATTCACACTTG AACTCCCCGTTTATCACCCAGAGTCCAAGGAACCGGCAGGATCTAAGCAGGGACCTAGTTTGGATTCACCTATTCGTACG ACTGCGTCCAAAGCATCTGGGCGCCGAAAGGAAAAATCATGA
Upstream 100 bases:
>100_bases GGTTCCGTAGTAAACCCAGGCGGCACCTACCTCGATCCTGAGGCAGCAGCAGCCGGCGCAGCAGCAGTAGCAAACCAGGG TAATAAGTAGCTATTTGTAG
Downstream 100 bases:
>100_bases CGACAATCCTGATCGTTGAAGATGAGGAATCGTTAGCAGATCCTTTGGCCTTTCTTCTTCGCAAAGAAGGTTTTGACACC ATCATCGCCGGTGATGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSTLLAFVLGVVLMGLALPAYTKIKDRMRRHKSAVTLSENQVTTVGQVLHLAIQGSPTGITVVDRTGDVILSNGRAHELG IVHERSVDGNVWRVAQEAFQDQETHSLDVHPDRNPRRPGSRITAVQAVVKPLTLIDDRFVIIYASDESENVRMESARRDF VANVSHELKTPVGGMALLAEALMESSDDPEQVEYFGSRLHREAHRMADMINELISLSKLQGAERLPDMEPVQADDIISEA IERTQLAADNANIEIIRGDRTGVWVEADRSLLVTALANLISNAINYSPKSVPVSVSQSIRNDVVMIRVTDRGIGIAPEDQ GRVFERFFRVDKARSRQTGGTGLGLAIVKHVMANHGGSISLWSRPGTGSTFTLELPVYHPESKEPAGSKQGPSLDSPIRT TASKASGRRKEKS
Sequences:
>Translated_413_residues MSTLLAFVLGVVLMGLALPAYTKIKDRMRRHKSAVTLSENQVTTVGQVLHLAIQGSPTGITVVDRTGDVILSNGRAHELG IVHERSVDGNVWRVAQEAFQDQETHSLDVHPDRNPRRPGSRITAVQAVVKPLTLIDDRFVIIYASDESENVRMESARRDF VANVSHELKTPVGGMALLAEALMESSDDPEQVEYFGSRLHREAHRMADMINELISLSKLQGAERLPDMEPVQADDIISEA IERTQLAADNANIEIIRGDRTGVWVEADRSLLVTALANLISNAINYSPKSVPVSVSQSIRNDVVMIRVTDRGIGIAPEDQ GRVFERFFRVDKARSRQTGGTGLGLAIVKHVMANHGGSISLWSRPGTGSTFTLELPVYHPESKEPAGSKQGPSLDSPIRT TASKASGRRKEKS >Mature_412_residues STLLAFVLGVVLMGLALPAYTKIKDRMRRHKSAVTLSENQVTTVGQVLHLAIQGSPTGITVVDRTGDVILSNGRAHELGI VHERSVDGNVWRVAQEAFQDQETHSLDVHPDRNPRRPGSRITAVQAVVKPLTLIDDRFVIIYASDESENVRMESARRDFV ANVSHELKTPVGGMALLAEALMESSDDPEQVEYFGSRLHREAHRMADMINELISLSKLQGAERLPDMEPVQADDIISEAI ERTQLAADNANIEIIRGDRTGVWVEADRSLLVTALANLISNAINYSPKSVPVSVSQSIRNDVVMIRVTDRGIGIAPEDQG RVFERFFRVDKARSRQTGGTGLGLAIVKHVMANHGGSISLWSRPGTGSTFTLELPVYHPESKEPAGSKQGPSLDSPIRTT ASKASGRRKEKS
Specific function: Part of the two-component regulatory system senX3/regX3. Phosphorylates regX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to senX3 by the pstSCAB phosphate transporter system [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=237, Percent_Identity=33.7552742616034, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1790346, Length=228, Percent_Identity=31.5789473684211, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1786783, Length=220, Percent_Identity=31.3636363636364, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1789149, Length=241, Percent_Identity=29.4605809128631, Blast_Score=104, Evalue=9e-24, Organism=Escherichia coli, GI48994928, Length=237, Percent_Identity=28.6919831223629, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI145693157, Length=412, Percent_Identity=26.9417475728155, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1790436, Length=232, Percent_Identity=31.8965517241379, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1788393, Length=238, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787894, Length=233, Percent_Identity=29.1845493562232, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1788713, Length=238, Percent_Identity=25.6302521008403, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1788549, Length=240, Percent_Identity=27.9166666666667, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI87082128, Length=228, Percent_Identity=29.3859649122807, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790861, Length=219, Percent_Identity=30.1369863013699, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1789403, Length=240, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1786912, Length=236, Percent_Identity=24.1525423728814, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789808, Length=236, Percent_Identity=28.8135593220339, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI87081816, Length=282, Percent_Identity=26.241134751773, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790551, Length=215, Percent_Identity=27.4418604651163, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1788279, Length=221, Percent_Identity=26.6968325791855, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 45198; Mature: 45067
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLLAFVLGVVLMGLALPAYTKIKDRMRRHKSAVTLSENQVTTVGQVLHLAIQGSPTGI CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCEEECCCCHHHHHHHHEEEEECCCCCE TVVDRTGDVILSNGRAHELGIVHERSVDGNVWRVAQEAFQDQETHSLDVHPDRNPRRPGS EEEECCCCEEEECCCEEEECEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCH RITAVQAVVKPLTLIDDRFVIIYASDESENVRMESARRDFVANVSHELKTPVGGMALLAE HHHHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ALMESSDDPEQVEYFGSRLHREAHRMADMINELISLSKLQGAERLPDMEPVQADDIISEA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHH IERTQLAADNANIEIIRGDRTGVWVEADRSLLVTALANLISNAINYSPKSVPVSVSQSIR HHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC NDVVMIRVTDRGIGIAPEDQGRVFERFFRVDKARSRQTGGTGLGLAIVKHVMANHGGSIS CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEE LWSRPGTGSTFTLELPVYHPESKEPAGSKQGPSLDSPIRTTASKASGRRKEKS EEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure STLLAFVLGVVLMGLALPAYTKIKDRMRRHKSAVTLSENQVTTVGQVLHLAIQGSPTGI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCEEECCCCHHHHHHHHEEEEECCCCCE TVVDRTGDVILSNGRAHELGIVHERSVDGNVWRVAQEAFQDQETHSLDVHPDRNPRRPGS EEEECCCCEEEECCCEEEECEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCH RITAVQAVVKPLTLIDDRFVIIYASDESENVRMESARRDFVANVSHELKTPVGGMALLAE HHHHHHHHHHHHHEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ALMESSDDPEQVEYFGSRLHREAHRMADMINELISLSKLQGAERLPDMEPVQADDIISEA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHH IERTQLAADNANIEIIRGDRTGVWVEADRSLLVTALANLISNAINYSPKSVPVSVSQSIR HHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC NDVVMIRVTDRGIGIAPEDQGRVFERFFRVDKARSRQTGGTGLGLAIVKHVMANHGGSIS CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEE LWSRPGTGSTFTLELPVYHPESKEPAGSKQGPSLDSPIRTTASKASGRRKEKS EEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA