Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is regX3 [H]
Identifier: 145294521
GI number: 145294521
Start: 532265
End: 532963
Strand: Direct
Name: regX3 [H]
Synonym: cgR_0476
Alternate gene names: 145294521
Gene position: 532265-532963 (Clockwise)
Preceding gene: 145294520
Following gene: 145294522
Centisome position: 16.06
GC content: 55.36
Gene sequence:
>699_bases ATGACGACAATCCTGATCGTTGAAGATGAGGAATCGTTAGCAGATCCTTTGGCCTTTCTTCTTCGCAAAGAAGGTTTTGA CACCATCATCGCCGGTGATGGCCCAACCGCTCTTGTGGAGTTCAGTCGCAACGAAATCGATATCGTCCTCTTAGACCTCA TGCTCCCAGGCATGTCTGGCACCGACGTATGCAAAGAACTCCGCAGCGTATCCACTGTTCCCGTCATCATGGTCACCGCC CGCGACTCCGAGATCGACAAAGTTGTTGGTCTCGAACTCGGCGCCGATGATTATGTAACCAAGCCATATTCTTCCCGCGA ACTCATCGCCCGCATCCGCGCTGTCCTGCGCCGACGCGGAGTTACTGAAACCGAAGCCGAAGAATTACCACTTGACGATC AAATCCTCGAAGGCGGCCGCGTCCGCATGGACGTCGATTCCCACACCGTCACCGTCGACGGCGAACCAGTGAGCATGCCA CTGAAGGAATTCGACCTTCTGGAGTACCTCCTCCGCAACGCCGGCCGAGTCCTCACCCGCGGACAGCTCATCGACCGAAT TTGGGGCGCAGATTACGTCGGCGACACCAAAACCCTCGACGTTCATGTCAAAAGGTTGCGTTCCAAGATCGAAGAAGAGC CATCTCGACCTCGTTACCTCGTGACCGTGCGTGGATTGGGCTACAAATTCGAGCTGTAG
Upstream 100 bases:
>100_bases CAGAGTCCAAGGAACCGGCAGGATCTAAGCAGGGACCTAGTTTGGATTCACCTATTCGTACGACTGCGTCCAAAGCATCT GGGCGCCGAAAGGAAAAATC
Downstream 100 bases:
>100_bases GGCTCTGCTGGGCTTAGTTGGGCGCTCAACTTAGTTAAAACCAGACACACGTGCCCGCGGTTCGGGTTTTCCGAGTTGGT GGGCACTCTGGTTTGGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTTILIVEDEESLADPLAFLLRKEGFDTIIAGDGPTALVEFSRNEIDIVLLDLMLPGMSGTDVCKELRSVSTVPVIMVTA RDSEIDKVVGLELGADDYVTKPYSSRELIARIRAVLRRRGVTETEAEELPLDDQILEGGRVRMDVDSHTVTVDGEPVSMP LKEFDLLEYLLRNAGRVLTRGQLIDRIWGADYVGDTKTLDVHVKRLRSKIEEEPSRPRYLVTVRGLGYKFEL
Sequences:
>Translated_232_residues MTTILIVEDEESLADPLAFLLRKEGFDTIIAGDGPTALVEFSRNEIDIVLLDLMLPGMSGTDVCKELRSVSTVPVIMVTA RDSEIDKVVGLELGADDYVTKPYSSRELIARIRAVLRRRGVTETEAEELPLDDQILEGGRVRMDVDSHTVTVDGEPVSMP LKEFDLLEYLLRNAGRVLTRGQLIDRIWGADYVGDTKTLDVHVKRLRSKIEEEPSRPRYLVTVRGLGYKFEL >Mature_231_residues TTILIVEDEESLADPLAFLLRKEGFDTIIAGDGPTALVEFSRNEIDIVLLDLMLPGMSGTDVCKELRSVSTVPVIMVTAR DSEIDKVVGLELGADDYVTKPYSSRELIARIRAVLRRRGVTETEAEELPLDDQILEGGRVRMDVDSHTVTVDGEPVSMPL KEFDLLEYLLRNAGRVLTRGQLIDRIWGADYVGDTKTLDVHVKRLRSKIEEEPSRPRYLVTVRGLGYKFEL
Specific function: Part of the two-component regulatory system senX3/regX3. Once phosphorylated by senX3, activates the expression of several operons/genes involved in phosphate assimilation and metabolism, such as pstSCAB, phnDCE, and phoA [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=40.4347826086956, Blast_Score=167, Evalue=8e-43, Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=37.9310344827586, Blast_Score=160, Evalue=6e-41, Organism=Escherichia coli, GI1786911, Length=232, Percent_Identity=37.5, Blast_Score=156, Evalue=1e-39, Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=36.5638766519824, Blast_Score=150, Evalue=8e-38, Organism=Escherichia coli, GI1788394, Length=232, Percent_Identity=37.5, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=35.0877192982456, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1786784, Length=230, Percent_Identity=36.5217391304348, Blast_Score=144, Evalue=5e-36, Organism=Escherichia coli, GI1790860, Length=229, Percent_Identity=34.061135371179, Blast_Score=144, Evalue=7e-36, Organism=Escherichia coli, GI2367329, Length=234, Percent_Identity=37.6068376068376, Blast_Score=141, Evalue=3e-35, Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=36.7256637168142, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=36.8421052631579, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI1790552, Length=226, Percent_Identity=35.3982300884956, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787375, Length=230, Percent_Identity=31.304347826087, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=30.0429184549356, Blast_Score=110, Evalue=5e-26, Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=41.5094339622642, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26003; Mature: 25872
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTILIVEDEESLADPLAFLLRKEGFDTIIAGDGPTALVEFSRNEIDIVLLDLMLPGMSG CEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCEEEEEEEECCCCCCH TDVCKELRSVSTVPVIMVTARDSEIDKVVGLELGADDYVTKPYSSRELIARIRAVLRRRG HHHHHHHHCCCCCEEEEEEECCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC VTETEAEELPLDDQILEGGRVRMDVDSHTVTVDGEPVSMPLKEFDLLEYLLRNAGRVLTR CCCCCHHHCCCCHHHHCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHH GQLIDRIWGADYVGDTKTLDVHVKRLRSKIEEEPSRPRYLVTVRGLGYKFEL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECC >Mature Secondary Structure TTILIVEDEESLADPLAFLLRKEGFDTIIAGDGPTALVEFSRNEIDIVLLDLMLPGMSG EEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCEEEEEEEECCCCCCH TDVCKELRSVSTVPVIMVTARDSEIDKVVGLELGADDYVTKPYSSRELIARIRAVLRRRG HHHHHHHHCCCCCEEEEEEECCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC VTETEAEELPLDDQILEGGRVRMDVDSHTVTVDGEPVSMPLKEFDLLEYLLRNAGRVLTR CCCCCHHHCCCCHHHHCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHH GQLIDRIWGADYVGDTKTLDVHVKRLRSKIEEEPSRPRYLVTVRGLGYKFEL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA