Definition | Corynebacterium glutamicum R chromosome, complete genome. |
---|---|
Accession | NC_009342 |
Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is hmuT [H]
Identifier: 145294507
GI number: 145294507
Start: 517644
End: 518723
Strand: Direct
Name: hmuT [H]
Synonym: cgR_0462
Alternate gene names: 145294507
Gene position: 517644-518723 (Clockwise)
Preceding gene: 145294506
Following gene: 145294508
Centisome position: 15.62
GC content: 56.11
Gene sequence:
>1080_bases ATGAATAACGCTTTTCGACGCACCCTTACATCCGTAGTCCTCGCCGCTAGCTTGGCCTTAACGGCCTGCGCAAGCTGGGA TTCACCTACGGCATCTTCCAATGGTGATCTGATTGAGGAGATCCAGGCAAGCTCCACCTCAACAGATCCGCGCACCTTCA CAGGCTTGAGCATCGTGGAAGATATCGGCGATGTGGTTCCCGTAACCGACAACGCCTCACCAGCTCTGCCAGTTTCTTTG ACCGACGCTGATGGCAACGACGTGGTGGTGGAGGACGTGTCCCGCATCCTCCCACTGGATCTGTATGGAACCTATTCCAA AACCATCGCTGGCCTGGGACTCGTAGACAATATTGTGGGTCGTACTGTTAGTTCCACCGAGCCTGCATTGGCGGACACTG AGGTGGTCACCACTGGCGGACACACCCTCAATGCTGAAGCGATCCTTAATTTACATCCGACTTTGGTGATCATCGACCAC TCGATCGGCCCACGCGAAGTCATCGATCAGATCCGCGCAGCTGGTGTCGCCACGGTGATCATGTCGCCGCAGCGTTCCAT TTCCTCAATTGGCGACGACATCCGTGACATCGCCTCCGTCGTTGGACTTCCTGAAGAAGGGGAGAAGCTCGCGGAACGTT CCGTTGCTGAAGTCGAAGAGGCCAGCACGGTTGTCGATGAACTCACCCCAGAAGATCCCCTCAAAATGGTATTCCTCTAT GCCCGCGGAACTGGTGGAGTGTTCTTCATTTTGGGCGATGCCTATGGTGGACGCGATCTCATTGAAGGCCTGGGCGGCGT CGACATGGCTGCTGAAAAGGGCATCATTGATCTGGCACCAGCCAACGCGGAAGCACTTGCCGAACTAAATCCAGACGTCT TCGTGATGATGTCGGGAGGACTAGTCTCGACAGGAGGCATCGACGGTCTTATGGAACGCCCCGGCATTGCGCAGACAACC GCCGGACAAAATCAACGAGTACTGGCGCTTCCCGATGGTCAATCATTGGCCTTTGGTGCCCAAACTGGCGAGTTGTTGCT CCGCGCATCCCGCGAACTGTATGTGCAGGGCGGCGAGTAG
Upstream 100 bases:
>100_bases CCACCACCACACTGTTGCTCATCCTCGCGGCGTTCGTTGTCGCAGGTGGCTCCATGACTCGCTTCACCGTCGGCAACCCG ACTGGAAAATAAGGCTTCAC
Downstream 100 bases:
>100_bases ATGGTTGTGAAGGAGGTTGACGTCGAAAAGCAAAAAGCTGGCCGGGTGCCTGGTGCTATAGCTAAGCGCCGGACCGTGCG GATTGTGCTGTTTGTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MNNAFRRTLTSVVLAASLALTACASWDSPTASSNGDLIEEIQASSTSTDPRTFTGLSIVEDIGDVVPVTDNASPALPVSL TDADGNDVVVEDVSRILPLDLYGTYSKTIAGLGLVDNIVGRTVSSTEPALADTEVVTTGGHTLNAEAILNLHPTLVIIDH SIGPREVIDQIRAAGVATVIMSPQRSISSIGDDIRDIASVVGLPEEGEKLAERSVAEVEEASTVVDELTPEDPLKMVFLY ARGTGGVFFILGDAYGGRDLIEGLGGVDMAAEKGIIDLAPANAEALAELNPDVFVMMSGGLVSTGGIDGLMERPGIAQTT AGQNQRVLALPDGQSLAFGAQTGELLLRASRELYVQGGE
Sequences:
>Translated_359_residues MNNAFRRTLTSVVLAASLALTACASWDSPTASSNGDLIEEIQASSTSTDPRTFTGLSIVEDIGDVVPVTDNASPALPVSL TDADGNDVVVEDVSRILPLDLYGTYSKTIAGLGLVDNIVGRTVSSTEPALADTEVVTTGGHTLNAEAILNLHPTLVIIDH SIGPREVIDQIRAAGVATVIMSPQRSISSIGDDIRDIASVVGLPEEGEKLAERSVAEVEEASTVVDELTPEDPLKMVFLY ARGTGGVFFILGDAYGGRDLIEGLGGVDMAAEKGIIDLAPANAEALAELNPDVFVMMSGGLVSTGGIDGLMERPGIAQTT AGQNQRVLALPDGQSLAFGAQTGELLLRASRELYVQGGE >Mature_359_residues MNNAFRRTLTSVVLAASLALTACASWDSPTASSNGDLIEEIQASSTSTDPRTFTGLSIVEDIGDVVPVTDNASPALPVSL TDADGNDVVVEDVSRILPLDLYGTYSKTIAGLGLVDNIVGRTVSSTEPALADTEVVTTGGHTLNAEAILNLHPTLVIIDH SIGPREVIDQIRAAGVATVIMSPQRSISSIGDDIRDIASVVGLPEEGEKLAERSVAEVEEASTVVDELTPEDPLKMVFLY ARGTGGVFFILGDAYGGRDLIEGLGGVDMAAEKGIIDLAPANAEALAELNPDVFVMMSGGLVSTGGIDGLMERPGIAQTT AGQNQRVLALPDGQSLAFGAQTGELLLRASRELYVQGGE
Specific function: Part of the binding-protein-dependent transport system for hemin [H]
COG id: COG4558
COG function: function code P; ABC-type hemin transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 37256; Mature: 37256
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNAFRRTLTSVVLAASLALTACASWDSPTASSNGDLIEEIQASSTSTDPRTFTGLSIVE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEECHHHHHH DIGDVVPVTDNASPALPVSLTDADGNDVVVEDVSRILPLDLYGTYSKTIAGLGLVDNIVG HHCCEEECCCCCCCCCEEEEECCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC RTVSSTEPALADTEVVTTGGHTLNAEAILNLHPTLVIIDHSIGPREVIDQIRAAGVATVI CCCCCCCCCCCCCEEEECCCCEECCEEEEECCCEEEEEECCCCHHHHHHHHHHCCEEEEE MSPQRSISSIGDDIRDIASVVGLPEEGEKLAERSVAEVEEASTVVDELTPEDPLKMVFLY ECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE ARGTGGVFFILGDAYGGRDLIEGLGGVDMAAEKGIIDLAPANAEALAELNPDVFVMMSGG EECCCCEEEEEECCCCCHHHHHHCCCCCHHHHCCEEEECCCCHHHHHHCCCCEEEEECCC LVSTGGIDGLMERPGIAQTTAGQNQRVLALPDGQSLAFGAQTGELLLRASRELYVQGGE EEECCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCEEECCCHHHHHHHCCCEEEEECCC >Mature Secondary Structure MNNAFRRTLTSVVLAASLALTACASWDSPTASSNGDLIEEIQASSTSTDPRTFTGLSIVE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEECHHHHHH DIGDVVPVTDNASPALPVSLTDADGNDVVVEDVSRILPLDLYGTYSKTIAGLGLVDNIVG HHCCEEECCCCCCCCCEEEEECCCCCEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC RTVSSTEPALADTEVVTTGGHTLNAEAILNLHPTLVIIDHSIGPREVIDQIRAAGVATVI CCCCCCCCCCCCCEEEECCCCEECCEEEEECCCEEEEEECCCCHHHHHHHHHHCCEEEEE MSPQRSISSIGDDIRDIASVVGLPEEGEKLAERSVAEVEEASTVVDELTPEDPLKMVFLY ECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE ARGTGGVFFILGDAYGGRDLIEGLGGVDMAAEKGIIDLAPANAEALAELNPDVFVMMSGG EECCCCEEEEEECCCCCHHHHHHCCCCCHHHHCCEEEECCCCHHHHHHCCCCEEEEECCC LVSTGGIDGLMERPGIAQTTAGQNQRVLALPDGQSLAFGAQTGELLLRASRELYVQGGE EEECCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCEEECCCHHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]