Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is yngB [H]
Identifier: 145294485
GI number: 145294485
Start: 492413
End: 493336
Strand: Direct
Name: yngB [H]
Synonym: cgR_0440
Alternate gene names: 145294485
Gene position: 492413-493336 (Clockwise)
Preceding gene: 145294484
Following gene: 145294486
Centisome position: 14.86
GC content: 50.97
Gene sequence:
>924_bases ATGAGTTTGCCAATCGATGAGCATCAAAATGCTGTAAAAACTGTTGTTGTACCTGCCGCTGGAATGGGCACACGCTTCCT TCCCGCTACCAAGACGATCCCCAAGGAACTTCTTCCTGTGGTTGATACTCCGGGTATTGAGCTTGTTGCTAAAGAAGCTG CGGATCTCGGGGCATCTCGACTGGCTATTATTACTGCGCCAAACAAAGACGGAATTCTTAAGCACTTTGAGCCTTTCCCT GAGCTTGAGGCAACTTTGGAAGCTCGCGGCAAGACAGATCAGCTGAACAAAGTTCGAGCGGCCAGGGAGCTGATCGATAC TGTTCCTGTGGTTCAGGAAAAGCCACTGGGACTTGGTCATGCAGTCGGCCTCGCGGAGTCAGTGCTTGATCAGGACGAAG ATGTTGTTGCAGTCATGCTTCCTGATGATTTGGTCCTGCCTTTCGGCGTGACTGAAAGGATGGCTGAAGTTCGCGCCAAG TTTGGTGGATCCGTACTTGCAGCTATTGAAGTGGCTGAGGATGAAGTCTCCAGCTATGGCATTTTTGAGCTCGGGGATCT AGATGCGGAATCGGAAAGCGAAGGCATTCGACGTGTCGTAGGAATGGTCGAGAAGCCTGCGCCTGAAGATGCTCCATCAA GGTTTGCGGCTACTGGCCGTTATCTTCTTGATCGTGCTATTTTTGATGCACTTCGTCGCATTGAGCCTGGTGCCGGTGGG GAACTGCAGTTAACAGATGCCATTGCATTGTTGATTGAAGAAGGCCACCCAGTCCACATTGTGGTTCATGAAGGAAAGCG CCATGATCTCGGAAACCCAGCTGGCTATATCCCGGCTGTTGTGTACTTCGGGCTTCGCCACGCAGAGTACGGTTCCAGAA TTCACCGTGCAGTGAAGGAAATTCTCGCTGAGTTTGAATCTTAA
Upstream 100 bases:
>100_bases TTCTGAAGTTATAACTGACTTTTTATTAAGTGTTCATGCTCACATAAACTATTCCGCTGTCAAGAAGAATTATTCTAAAA AGTCGGTATCGTCATGGCCT
Downstream 100 bases:
>100_bases CAAGCAGAAGCCGCCTTCCATAGACACAATGTGGGAGGCGGTTTTTGTATGCAGCTAAAATCTGGTTTTATGGCCAAGAA AGTTGATACCTCGAACGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSLPIDEHQNAVKTVVVPAAGMGTRFLPATKTIPKELLPVVDTPGIELVAKEAADLGASRLAIITAPNKDGILKHFEPFP ELEATLEARGKTDQLNKVRAARELIDTVPVVQEKPLGLGHAVGLAESVLDQDEDVVAVMLPDDLVLPFGVTERMAEVRAK FGGSVLAAIEVAEDEVSSYGIFELGDLDAESESEGIRRVVGMVEKPAPEDAPSRFAATGRYLLDRAIFDALRRIEPGAGG ELQLTDAIALLIEEGHPVHIVVHEGKRHDLGNPAGYIPAVVYFGLRHAEYGSRIHRAVKEILAEFES
Sequences:
>Translated_307_residues MSLPIDEHQNAVKTVVVPAAGMGTRFLPATKTIPKELLPVVDTPGIELVAKEAADLGASRLAIITAPNKDGILKHFEPFP ELEATLEARGKTDQLNKVRAARELIDTVPVVQEKPLGLGHAVGLAESVLDQDEDVVAVMLPDDLVLPFGVTERMAEVRAK FGGSVLAAIEVAEDEVSSYGIFELGDLDAESESEGIRRVVGMVEKPAPEDAPSRFAATGRYLLDRAIFDALRRIEPGAGG ELQLTDAIALLIEEGHPVHIVVHEGKRHDLGNPAGYIPAVVYFGLRHAEYGSRIHRAVKEILAEFES >Mature_306_residues SLPIDEHQNAVKTVVVPAAGMGTRFLPATKTIPKELLPVVDTPGIELVAKEAADLGASRLAIITAPNKDGILKHFEPFPE LEATLEARGKTDQLNKVRAARELIDTVPVVQEKPLGLGHAVGLAESVLDQDEDVVAVMLPDDLVLPFGVTERMAEVRAKF GGSVLAAIEVAEDEVSSYGIFELGDLDAESESEGIRRVVGMVEKPAPEDAPSRFAATGRYLLDRAIFDALRRIEPGAGGE LQLTDAIALLIEEGHPVHIVVHEGKRHDLGNPAGYIPAVVYFGLRHAEYGSRIHRAVKEILAEFES
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG) [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=300, Percent_Identity=39, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI1788355, Length=299, Percent_Identity=33.4448160535117, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 33047; Mature: 32916
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPIDEHQNAVKTVVVPAAGMGTRFLPATKTIPKELLPVVDTPGIELVAKEAADLGASR CCCCCCHHCCCEEEEEEECCCCCCCCCCCCHHCHHHHHHHCCCCCHHHHHHHHHHCCCCE LAIITAPNKDGILKHFEPFPELEATLEARGKTDQLNKVRAARELIDTVPVVQEKPLGLGH EEEEECCCCCCCHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH AVGLAESVLDQDEDVVAVMLPDDLVLPFGVTERMAEVRAKFGGSVLAAIEVAEDEVSSYG HHHHHHHHHCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCC IFELGDLDAESESEGIRRVVGMVEKPAPEDAPSRFAATGRYLLDRAIFDALRRIEPGAGG CEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC ELQLTDAIALLIEEGHPVHIVVHEGKRHDLGNPAGYIPAVVYFGLRHAEYGSRIHRAVKE CEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILAEFES HHHHHCC >Mature Secondary Structure SLPIDEHQNAVKTVVVPAAGMGTRFLPATKTIPKELLPVVDTPGIELVAKEAADLGASR CCCCCHHCCCEEEEEEECCCCCCCCCCCCHHCHHHHHHHCCCCCHHHHHHHHHHCCCCE LAIITAPNKDGILKHFEPFPELEATLEARGKTDQLNKVRAARELIDTVPVVQEKPLGLGH EEEEECCCCCCCHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH AVGLAESVLDQDEDVVAVMLPDDLVLPFGVTERMAEVRAKFGGSVLAAIEVAEDEVSSYG HHHHHHHHHCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCC IFELGDLDAESESEGIRRVVGMVEKPAPEDAPSRFAATGRYLLDRAIFDALRRIEPGAGG CEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC ELQLTDAIALLIEEGHPVHIVVHEGKRHDLGNPAGYIPAVVYFGLRHAEYGSRIHRAVKE CEEHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILAEFES HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]