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The map label for this gene is yrdA [C]

Identifier: 145294240

GI number: 145294240

Start: 213478

End: 214038

Strand: Direct

Name: yrdA [C]

Synonym: cgR_0196

Alternate gene names: 145294240

Gene position: 213478-214038 (Clockwise)

Preceding gene: 145294239

Following gene: 145294245

Centisome position: 6.44

GC content: 59.54

Gene sequence:

>561_bases
ATGACACCTCAACCACTGATTTTGCCTTTCGGCGATAAAGTTCCGCGGATCCATGAAAGCGCATGGATTGCCCCGAATGC
CACCATCATCGGGGACGTCGAGATTGGCCCGGATGCGTCCATTTTTTATGGCGTTGTCCTGCGCGGTGACGTCAACAAAA
TCGCCATCGGCGCCCGCACCAACGTCCAGGACAATTGTGTTCTCCACGTTGATGGCGATGCGCCATGCACCCTCGGCGAC
GATGTCACGGTCGGCCACATGGCGCTTGTTCACGGCGCGACGGTGGGCAACGGCACGCTTGTCGGCATGAAATCTGCGCT
GCTTTCCGGCAGCCACGTCGGCGCCGGAGCACTCATTGCCGCTGGTGCGGTGGTGCTGGAGGGCCAAGAAATCCCGGCGA
AAGCTTTAGCGGCCGGGGTTCCGGCCAAAGTGCGCAGATTGCTTGACGACGCCCAGTCCCAGTCATTTATCCCCCACGCG
GGCCGCTATGTAGAAACATCAAAAGCCCAGGCTTCCATCGCGGAAGCGCTGAGCTTAGATGAGGTTAGGGTACGAGGGTA
A

Upstream 100 bases:

>100_bases
TTATTGATGATCGCCTGCGTAACATTGAGGCAGCGCGCGAAGAAGGTCTCAGCACAATTCACTTCACTGGCTTAGATTCC
TTAAAAGAAAGCATTCAGGA

Downstream 100 bases:

>100_bases
GTGGCTCGTTGAGTAGTCGATCAAGTGCGACTGCTCGAGCCGCTGCGCGGACGTTTTCCCTGTGGGTGGGGATCAAGCGG
AGTTCAATGTCTGCGTCGTA

Product: hypothetical protein

Products: CO2; H2O

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTPQPLILPFGDKVPRIHESAWIAPNATIIGDVEIGPDASIFYGVVLRGDVNKIAIGARTNVQDNCVLHVDGDAPCTLGD
DVTVGHMALVHGATVGNGTLVGMKSALLSGSHVGAGALIAAGAVVLEGQEIPAKALAAGVPAKVRRLLDDAQSQSFIPHA
GRYVETSKAQASIAEALSLDEVRVRG

Sequences:

>Translated_186_residues
MTPQPLILPFGDKVPRIHESAWIAPNATIIGDVEIGPDASIFYGVVLRGDVNKIAIGARTNVQDNCVLHVDGDAPCTLGD
DVTVGHMALVHGATVGNGTLVGMKSALLSGSHVGAGALIAAGAVVLEGQEIPAKALAAGVPAKVRRLLDDAQSQSFIPHA
GRYVETSKAQASIAEALSLDEVRVRG
>Mature_185_residues
TPQPLILPFGDKVPRIHESAWIAPNATIIGDVEIGPDASIFYGVVLRGDVNKIAIGARTNVQDNCVLHVDGDAPCTLGDD
VTVGHMALVHGATVGNGTLVGMKSALLSGSHVGAGALIAAGAVVLEGQEIPAKALAAGVPAKVRRLLDDAQSQSFIPHAG
RYVETSKAQASIAEALSLDEVRVRG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=168, Percent_Identity=39.8809523809524, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1787667, Length=138, Percent_Identity=34.0579710144928, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI87081681, Length=142, Percent_Identity=34.5070422535211, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: 4.2.1.1

Molecular weight: Translated: 19098; Mature: 18967

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPQPLILPFGDKVPRIHESAWIAPNATIIGDVEIGPDASIFYGVVLRGDVNKIAIGART
CCCCCEEEECCCCCCCCCCCEEECCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEECCC
NVQDNCVLHVDGDAPCTLGDDVTVGHMALVHGATVGNGTLVGMKSALLSGSHVGAGALIA
CCCCCEEEEECCCCCEECCCCCEEEEEEEEECCCCCCCEEEEHHHHHHCCCCCCCCHHHH
AGAVVLEGQEIPAKALAAGVPAKVRRLLDDAQSQSFIPHAGRYVETSKAQASIAEALSLD
CCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHCCC
EVRVRG
EEEECC
>Mature Secondary Structure 
TPQPLILPFGDKVPRIHESAWIAPNATIIGDVEIGPDASIFYGVVLRGDVNKIAIGART
CCCCEEEECCCCCCCCCCCEEECCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEECCC
NVQDNCVLHVDGDAPCTLGDDVTVGHMALVHGATVGNGTLVGMKSALLSGSHVGAGALIA
CCCCCEEEEECCCCCEECCCCCEEEEEEEEECCCCCCCEEEEHHHHHHCCCCCCCCHHHH
AGAVVLEGQEIPAKALAAGVPAKVRRLLDDAQSQSFIPHAGRYVETSKAQASIAEALSLD
CCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHCCC
EVRVRG
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2CO3

Specific reaction: H2CO3 = CO2 + H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]