Definition | Corynebacterium glutamicum R chromosome, complete genome. |
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Accession | NC_009342 |
Length | 3,314,179 |
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The map label for this gene is yihX [C]
Identifier: 145294239
GI number: 145294239
Start: 212876
End: 213481
Strand: Direct
Name: yihX [C]
Synonym: cgR_0195
Alternate gene names: 145294239
Gene position: 212876-213481 (Clockwise)
Preceding gene: 145294237
Following gene: 145294240
Centisome position: 6.42
GC content: 50.5
Gene sequence:
>606_bases ATGTCTAAGACTCGTACTTTTCTGTTTGATCTTTATGGTGTTCTCATCAAGGAGCATGGTGCGGCGCAGTTTGAGCGGGT TGCGCGTGCGGTGGGGGAGCCGTCCAAGAACGACAAGCTGCATGAGGTTTATGAGTCGCTTCGTCTGGATCTGGATGCCG GCCGCGTGAGTGAGGTGAATTATTGGAATCAGATCAAACTATTGGTGGGTTTGGAGTTTTTGGATATCCAGGAGGTCATC GCGGCTGACTACAAGGGCCTTTATGAGCGTGATCAGGACATGGTTGATTATGTGTTGTCGTTGAAGGCGAAAGGCCACCG CATCGGAATTTTGTCGAATATTCCGGAGGGGTTGGCCAAGCTGTTGAAGGAGCACAATTCGGAGTGGCTTGATCAGCTTG ATGCGGTGACTTTGTCGTGCGATATTGGGGCGGCGAAGCCGGAGCCGAAGTCTTTCCATGTGGCACTTGAGGCCCTTGGT GAAAAAGCTGAGGATGTGACCTTTATTGATGATCGCCTGCGTAACATTGAGGCAGCGCGCGAAGAAGGTCTCAGCACAAT TCACTTCACTGGCTTAGATTCCTTAAAAGAAAGCATTCAGGAATGA
Upstream 100 bases:
>100_bases TAGAAGCCTTCGGTCAATAAATTTCAGCAAATTCCCGATCTCCACGACGCGTCATCTCAATTCCACCTAGGCTTGGACGC AGGTTAGAAAGGAGCCTTCG
Downstream 100 bases:
>100_bases CACCTCAACCACTGATTTTGCCTTTCGGCGATAAAGTTCCGCGGATCCATGAAAGCGCATGGATTGCCCCGAATGCCACC ATCATCGGGGACGTCGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: HAD Family Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase Domain Protein Hydrolase; Phosphoglycolate Phosphatase
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSKTRTFLFDLYGVLIKEHGAAQFERVARAVGEPSKNDKLHEVYESLRLDLDAGRVSEVNYWNQIKLLVGLEFLDIQEVI AADYKGLYERDQDMVDYVLSLKAKGHRIGILSNIPEGLAKLLKEHNSEWLDQLDAVTLSCDIGAAKPEPKSFHVALEALG EKAEDVTFIDDRLRNIEAAREEGLSTIHFTGLDSLKESIQE
Sequences:
>Translated_201_residues MSKTRTFLFDLYGVLIKEHGAAQFERVARAVGEPSKNDKLHEVYESLRLDLDAGRVSEVNYWNQIKLLVGLEFLDIQEVI AADYKGLYERDQDMVDYVLSLKAKGHRIGILSNIPEGLAKLLKEHNSEWLDQLDAVTLSCDIGAAKPEPKSFHVALEALG EKAEDVTFIDDRLRNIEAAREEGLSTIHFTGLDSLKESIQE >Mature_200_residues SKTRTFLFDLYGVLIKEHGAAQFERVARAVGEPSKNDKLHEVYESLRLDLDAGRVSEVNYWNQIKLLVGLEFLDIQEVIA ADYKGLYERDQDMVDYVLSLKAKGHRIGILSNIPEGLAKLLKEHNSEWLDQLDAVTLSCDIGAAKPEPKSFHVALEALGE KAEDVTFIDDRLRNIEAAREEGLSTIHFTGLDSLKESIQE
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22643; Mature: 22512
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTRTFLFDLYGVLIKEHGAAQFERVARAVGEPSKNDKLHEVYESLRLDLDAGRVSEVN CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC YWNQIKLLVGLEFLDIQEVIAADYKGLYERDQDMVDYVLSLKAKGHRIGILSNIPEGLAK HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEHHHHCHHHHHH LLKEHNSEWLDQLDAVTLSCDIGAAKPEPKSFHVALEALGEKAEDVTFIDDRLRNIEAAR HHHHHCHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EEGLSTIHFTGLDSLKESIQE HCCCCEEEECCHHHHHHHHCC >Mature Secondary Structure SKTRTFLFDLYGVLIKEHGAAQFERVARAVGEPSKNDKLHEVYESLRLDLDAGRVSEVN CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC YWNQIKLLVGLEFLDIQEVIAADYKGLYERDQDMVDYVLSLKAKGHRIGILSNIPEGLAK HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEHHHHCHHHHHH LLKEHNSEWLDQLDAVTLSCDIGAAKPEPKSFHVALEALGEKAEDVTFIDDRLRNIEAAR HHHHHCHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EEGLSTIHFTGLDSLKESIQE HCCCCEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA