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The map label for this gene is spo0F [H]

Identifier: 138896963

GI number: 138896963

Start: 3437847

End: 3438209

Strand: Reverse

Name: spo0F [H]

Synonym: GTNG_3332

Alternate gene names: 138896963

Gene position: 3438209-3437847 (Counterclockwise)

Preceding gene: 138896965

Following gene: 138896962

Centisome position: 96.84

GC content: 44.08

Gene sequence:

>363_bases
GTGGGGAACAAAATTTTGATAGTCGACGACCAATATGGCATCCGCATTTTGTTAAACGAAGTGTTTCAACGCGAAAGATA
TGTGACATACCAGGCGGCCAACGGTATGCAGGCGCTTGAAATTGTTCGCAAACACCATCCCGATCTTGTGCTTCTCGATA
TGAAAATTCCCGGCATGGACGGTATTGAAATTTTAAAGCGGCTGAAAGACATTGACCCAGATATTAAAGTGATCATCATG
ACGGCGTATGGAGAGCTTGATATGATTCAGGAAACAAAAGAGCTCGGCGCGCTGATGCATTTTGCCAAGCCGTTTGATAT
CGATGATTTGCGCGCTGCCGTTAAAAAACATATTTCTGTGTAG

Upstream 100 bases:

>100_bases
ATTATACAAAACGCACAAATGGCAAGAAAAGCAAGCAGGAAATACGTTCGGAAAATGCGAAACATTAATAGGGAGAAAAA
AGGAATAGAGGTGCATAACC

Downstream 100 bases:

>100_bases
AAGTGCGTTTTTAGCTGCTGGTACAACTTTAGCAGAATAAAGACTGGAAATGTTGCTGTTTTGCTGACAAGTTGGTATGC
TTATAACGTAGATGTATTTT

Product: two-component response regulator

Products: NA

Alternate protein names: Stage 0 sporulation protein F [H]

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MGNKILIVDDQYGIRILLNEVFQRERYVTYQAANGMQALEIVRKHHPDLVLLDMKIPGMDGIEILKRLKDIDPDIKVIIM
TAYGELDMIQETKELGALMHFAKPFDIDDLRAAVKKHISV

Sequences:

>Translated_120_residues
MGNKILIVDDQYGIRILLNEVFQRERYVTYQAANGMQALEIVRKHHPDLVLLDMKIPGMDGIEILKRLKDIDPDIKVIIM
TAYGELDMIQETKELGALMHFAKPFDIDDLRAAVKKHISV
>Mature_119_residues
GNKILIVDDQYGIRILLNEVFQRERYVTYQAANGMQALEIVRKHHPDLVLLDMKIPGMDGIEILKRLKDIDPDIKVIIMT
AYGELDMIQETKELGALMHFAKPFDIDDLRAAVKKHISV

Specific function: Key element in the phosphorelay regulating sporulation initiation. Phosphorylation of spo0B during sporulation initiation [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=118, Percent_Identity=38.9830508474576, Blast_Score=93, Evalue=4e-21,
Organism=Escherichia coli, GI1790299, Length=115, Percent_Identity=37.3913043478261, Blast_Score=82, Evalue=1e-17,
Organism=Escherichia coli, GI1790437, Length=115, Percent_Identity=40, Blast_Score=82, Evalue=1e-17,
Organism=Escherichia coli, GI1786599, Length=117, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13775; Mature: 13643

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNKILIVDDQYGIRILLNEVFQRERYVTYQAANGMQALEIVRKHHPDLVLLDMKIPGMD
CCCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCC
GIEILKRLKDIDPDIKVIIMTAYGELDMIQETKELGALMHFAKPFDIDDLRAAVKKHISV
HHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNKILIVDDQYGIRILLNEVFQRERYVTYQAANGMQALEIVRKHHPDLVLLDMKIPGMD
CCEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCC
GIEILKRLKDIDPDIKVIIMTAYGELDMIQETKELGALMHFAKPFDIDDLRAAVKKHISV
HHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3003689; 2997779; 2457578; 9353933; 9384377; 8528078; 9254596; 8805550; 9335530; 10997904 [H]