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The map label for this gene is fadM [H]

Identifier: 138896599

GI number: 138896599

Start: 3060521

End: 3061468

Strand: Reverse

Name: fadM [H]

Synonym: GTNG_2962

Alternate gene names: 138896599

Gene position: 3061468-3060521 (Counterclockwise)

Preceding gene: 138896605

Following gene: 138896597

Centisome position: 86.23

GC content: 47.57

Gene sequence:

>948_bases
ATGCGTTTTCAAACAAGGGGGCTTACAACTGTGGAGCAGCTGATGCGAGACTTTTTCTTGTTCCTGTCGAAAAATAAAAC
GTTGACGAAGTTGGCGAAGCAATACGGCCTCCGCTTCGGCGCTTCAAGATTTGTCGCCGGCGAAACGATTGATGATGCGG
TGCGTGTCATCCGCCAGCTAAACGAAAAAGGGTTAGCTGTCACGGTCGACTATTTAGGGGAGTTTGTCGACAATGAGCGG
GAAGCAAACGAGATGGCAAGGCACTGTCTTGAGGCGATTGAGGCGATTAGCCGGGAGAAATTAAATTCGCAACTGTCGTT
GAAAATGACATCGATGGGGCTTGATATTTCCGATGACCTTGTGATGCGCAATATGCGCCGCATTTTAGATGTGGCGAAGC
AGCGCGGCGTGTTTGTGACGATTGATATGGAAGACTACTCGCGCTGCCAAAAGACGCTCGATATTTTTAAACAGTTGAAA
AAAGAGTACGATAACGTCGGCACGGTGCTGCAGGCGTATTTATACCGAACTGAAAAAGATATTGAAGATTTAAAGTCATA
CCGCCCGAATTTGCGTCTCGTCAAAGGGGCATATAAAGAATCGCCGGAAGTGGCGTTCCCAGAAAAAAAAGATGTGGATG
AAAATTTTAAAAAGATCATTAAACAACATTTGCTTAACGGCAACTATACGGCGGTGGCGACGCATGACGACGCCATCATT
GAATATACAAAGCAGCTTGTTAAGGAATACAACATTCCAAACAGCCAGTTCGAGTTTCAAATGCTATACGGCATCCGCCC
GGAGCGCCAAATCGAGCTGGTGCGCGAGGGGTATACGATGCGTGTGTACGTCCCGTACGGAACGGACTGGTACGGTTATT
TTATGCGCCGGCTTGCTGAGCGTCCGGCCAATGTAGCGTTCGTCTTAAAAGGGATTATTCGGAAGTAA

Upstream 100 bases:

>100_bases
TAGATTATCCAGTGAGTGGAAAATTATACACAAATAAAAAATAAACAGCAGGGAAAAAACATATTCAATGACGTGAAAAC
GTGGTACAATAAAGATGTGA

Downstream 100 bases:

>100_bases
GGGAGGCGGAGGGCGGCGGGAGTGCCGCCTTCGTTGGTACGATCGGCTTTGGCCGATGACTTCCCTGCGTTATGCATCAG
AGGGGGACTAAACGCCGCCG

Product: Prolyne dehydrogenase

Products: NA

Alternate protein names: PRODH 1; Proline oxidase 1 [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MRFQTRGLTTVEQLMRDFFLFLSKNKTLTKLAKQYGLRFGASRFVAGETIDDAVRVIRQLNEKGLAVTVDYLGEFVDNER
EANEMARHCLEAIEAISREKLNSQLSLKMTSMGLDISDDLVMRNMRRILDVAKQRGVFVTIDMEDYSRCQKTLDIFKQLK
KEYDNVGTVLQAYLYRTEKDIEDLKSYRPNLRLVKGAYKESPEVAFPEKKDVDENFKKIIKQHLLNGNYTAVATHDDAII
EYTKQLVKEYNIPNSQFEFQMLYGIRPERQIELVREGYTMRVYVPYGTDWYGYFMRRLAERPANVAFVLKGIIRK

Sequences:

>Translated_315_residues
MRFQTRGLTTVEQLMRDFFLFLSKNKTLTKLAKQYGLRFGASRFVAGETIDDAVRVIRQLNEKGLAVTVDYLGEFVDNER
EANEMARHCLEAIEAISREKLNSQLSLKMTSMGLDISDDLVMRNMRRILDVAKQRGVFVTIDMEDYSRCQKTLDIFKQLK
KEYDNVGTVLQAYLYRTEKDIEDLKSYRPNLRLVKGAYKESPEVAFPEKKDVDENFKKIIKQHLLNGNYTAVATHDDAII
EYTKQLVKEYNIPNSQFEFQMLYGIRPERQIELVREGYTMRVYVPYGTDWYGYFMRRLAERPANVAFVLKGIIRK
>Mature_315_residues
MRFQTRGLTTVEQLMRDFFLFLSKNKTLTKLAKQYGLRFGASRFVAGETIDDAVRVIRQLNEKGLAVTVDYLGEFVDNER
EANEMARHCLEAIEAISREKLNSQLSLKMTSMGLDISDDLVMRNMRRILDVAKQRGVFVTIDMEDYSRCQKTLDIFKQLK
KEYDNVGTVLQAYLYRTEKDIEDLKSYRPNLRLVKGAYKESPEVAFPEKKDVDENFKKIIKQHLLNGNYTAVATHDDAII
EYTKQLVKEYNIPNSQFEFQMLYGIRPERQIELVREGYTMRVYVPYGTDWYGYFMRRLAERPANVAFVLKGIIRK

Specific function: Catalyzes the oxidation of L-proline to delta-1- pyrroline-5-carboxylate (P5C) [H]

COG id: COG0506

COG function: function code E; Proline dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline oxidase family [H]

Homologues:

Organism=Escherichia coli, GI1787250, Length=320, Percent_Identity=29.375, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015590
- InterPro:   IPR002872
- InterPro:   IPR008219 [H]

Pfam domain/function: PF01619 Pro_dh [H]

EC number: =1.5.99.8 [H]

Molecular weight: Translated: 36878; Mature: 36878

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFQTRGLTTVEQLMRDFFLFLSKNKTLTKLAKQYGLRFGASRFVAGETIDDAVRVIRQL
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCHHHHCCCCHHHHHHHHHHH
NEKGLAVTVDYLGEFVDNEREANEMARHCLEAIEAISREKLNSQLSLKMTSMGLDISDDL
CCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHCCCCCCHHH
VMRNMRRILDVAKQRGVFVTIDMEDYSRCQKTLDIFKQLKKEYDNVGTVLQAYLYRTEKD
HHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEDLKSYRPNLRLVKGAYKESPEVAFPEKKDVDENFKKIIKQHLLNGNYTAVATHDDAII
HHHHHHCCCCCEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHH
EYTKQLVKEYNIPNSQFEFQMLYGIRPERQIELVREGYTMRVYVPYGTDWYGYFMRRLAE
HHHHHHHHHCCCCCCCCCEEHHHCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH
RPANVAFVLKGIIRK
CCCHHHHHHHHHHCC
>Mature Secondary Structure
MRFQTRGLTTVEQLMRDFFLFLSKNKTLTKLAKQYGLRFGASRFVAGETIDDAVRVIRQL
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCHHHHCCCCHHHHHHHHHHH
NEKGLAVTVDYLGEFVDNEREANEMARHCLEAIEAISREKLNSQLSLKMTSMGLDISDDL
CCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHCCCCCCHHH
VMRNMRRILDVAKQRGVFVTIDMEDYSRCQKTLDIFKQLKKEYDNVGTVLQAYLYRTEKD
HHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEDLKSYRPNLRLVKGAYKESPEVAFPEKKDVDENFKKIIKQHLLNGNYTAVATHDDAII
HHHHHHCCCCCEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHH
EYTKQLVKEYNIPNSQFEFQMLYGIRPERQIELVREGYTMRVYVPYGTDWYGYFMRRLAE
HHHHHHHHHCCCCCCCCCEEHHHCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH
RPANVAFVLKGIIRK
CCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA