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The map label for this gene is spoVID [H]

Identifier: 138896207

GI number: 138896207

Start: 2675103

End: 2676167

Strand: Reverse

Name: spoVID [H]

Synonym: GTNG_2570

Alternate gene names: 138896207

Gene position: 2676167-2675103 (Counterclockwise)

Preceding gene: 138896208

Following gene: 138896206

Centisome position: 75.38

GC content: 49.3

Gene sequence:

>1065_bases
TTGGAGCAATCGTATTTGCGTTTTTCATTGGAAGAATCAGTCTGGTTTAAAAGCGGACAGGAAGTCGCCGAGTTTTTGTC
CATCTCTCTTGATCCGGTCATTTCCGTCGACGAGTACGACCAATATATTACGATTCGCGGCGCGCTCGAGTTAAGCGGAG
AATTCCGTCAAGCGGACGAATCGCCGCAGAGGGACGTGGATGATGATACGTTTGAATCGGCAAGCTATCGATTCATTCAA
CACATTTCGGTGCGTGAAGACGGCATTAGCGAACTGTTGCACCGTTTTCCAATTGATATTACGATTCCGAAAAACCGTAT
TCGCGAACTTGACGATGTATACGTGACAGTCGAATCATTCGACTATGATTTAGGTGACAACGGAAGGCTGCTTGTGACTG
CAGACATTTCGATCAGCGGGATTAGTGAGGCGCCGCTCGTCGATGACTTACCGGATGATGACGAAGATGAGGAGCCGCTG
TTTACCCCATTTGAGTCAATCGCCCGCAAAGAGGCAACCGACGATGAAGCATTCGCATCGGAAGATCGCCCCGCTAATGA
GGTGAACGAACAGCCTATTGCTGCAGTCAGTGAAACGCCGTCTTCCGAGCTTGAACTGGCGGCTGTGCGCCATGAAGAAA
CGCCGTCTGATCAAAAAGAGGACGTAAAAGAGCCATTTTTGCCAATTGAGACGGAAACGAAAGCTGTCAGTGCGGAAGCA
GAAGAGGAACTTGATAATCTGTCGCCGCCAACGGAGGCGAAAGTATCGATTGGCGCAGCCAAAAAAGCGATGGATGAAGA
GGACGAGGAAGAACAACAAACGGAAGTGAAAAGTGAAAACGCCCTTTACTTAACGAAGCTGTTTGCCAAAAGTGGAGCGG
AAGAGTTTACAACCGTCAAAATTTGCATCGTCCAACAAGGAGATTCGTTGGACAAGATTGCTGAACGGTATGATGTGACG
ATCTCCCAACTTTTGCGCGCCAACGATTTGGAAAGCGCGGAGGACGTGCATGAAGGGCAGCTGTTATATATTCCGGCCTT
GGCGGGAAGCCGTCCTTTCTCGTGA

Upstream 100 bases:

>100_bases
TGGGCAGCCCGATTTTTTTATCATACCGCCTCTTTTCCGTTCATACAATGGATAATGTCATAGAAACTATTTGTCGAGGG
GACGGAAGGAGGAAGCCCGG

Downstream 100 bases:

>100_bases
AAGGAACGCTTTCCGTTTCTTTTGCCGGTGAGGGGGCGTAACAATGGCCATACGGTCTGAAACGTACCGCGCCGTACTTC
ATCAGTATGGGCTTCAACCA

Product: stage VI sporulation protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MEQSYLRFSLEESVWFKSGQEVAEFLSISLDPVISVDEYDQYITIRGALELSGEFRQADESPQRDVDDDTFESASYRFIQ
HISVREDGISELLHRFPIDITIPKNRIRELDDVYVTVESFDYDLGDNGRLLVTADISISGISEAPLVDDLPDDDEDEEPL
FTPFESIARKEATDDEAFASEDRPANEVNEQPIAAVSETPSSELELAAVRHEETPSDQKEDVKEPFLPIETETKAVSAEA
EEELDNLSPPTEAKVSIGAAKKAMDEEDEEEQQTEVKSENALYLTKLFAKSGAEEFTTVKICIVQQGDSLDKIAERYDVT
ISQLLRANDLESAEDVHEGQLLYIPALAGSRPFS

Sequences:

>Translated_354_residues
MEQSYLRFSLEESVWFKSGQEVAEFLSISLDPVISVDEYDQYITIRGALELSGEFRQADESPQRDVDDDTFESASYRFIQ
HISVREDGISELLHRFPIDITIPKNRIRELDDVYVTVESFDYDLGDNGRLLVTADISISGISEAPLVDDLPDDDEDEEPL
FTPFESIARKEATDDEAFASEDRPANEVNEQPIAAVSETPSSELELAAVRHEETPSDQKEDVKEPFLPIETETKAVSAEA
EEELDNLSPPTEAKVSIGAAKKAMDEEDEEEQQTEVKSENALYLTKLFAKSGAEEFTTVKICIVQQGDSLDKIAERYDVT
ISQLLRANDLESAEDVHEGQLLYIPALAGSRPFS
>Mature_354_residues
MEQSYLRFSLEESVWFKSGQEVAEFLSISLDPVISVDEYDQYITIRGALELSGEFRQADESPQRDVDDDTFESASYRFIQ
HISVREDGISELLHRFPIDITIPKNRIRELDDVYVTVESFDYDLGDNGRLLVTADISISGISEAPLVDDLPDDDEDEEPL
FTPFESIARKEATDDEAFASEDRPANEVNEQPIAAVSETPSSELELAAVRHEETPSDQKEDVKEPFLPIETETKAVSAEA
EEELDNLSPPTEAKVSIGAAKKAMDEEDEEEQQTEVKSENALYLTKLFAKSGAEEFTTVKICIVQQGDSLDKIAERYDVT
ISQLLRANDLESAEDVHEGQLLYIPALAGSRPFS

Specific function: Required for assembly of a normal spore coat. May be a component of the innermost layer of the spore coat that aids in its adherence to the prespore [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR014256 [H]

Pfam domain/function: PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 39630; Mature: 39630

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQSYLRFSLEESVWFKSGQEVAEFLSISLDPVISVDEYDQYITIRGALELSGEFRQADE
CCCCCEEEEHHHHHHHCCHHHHHHHHHCCCCCEEECCCCCCEEEEEEEEEECCHHHCCCC
SPQRDVDDDTFESASYRFIQHISVREDGISELLHRFPIDITIPKNRIRELDDVYVTVESF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCCCEEEEEECC
DYDLGDNGRLLVTADISISGISEAPLVDDLPDDDEDEEPLFTPFESIARKEATDDEAFAS
CCCCCCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHCC
EDRPANEVNEQPIAAVSETPSSELELAAVRHEETPSDQKEDVKEPFLPIETETKAVSAEA
CCCCCHHCCCCCCHHHHCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCHHHHHHH
EEELDNLSPPTEAKVSIGAAKKAMDEEDEEEQQTEVKSENALYLTKLFAKSGAEEFTTVK
HHHHHCCCCCCCCEEEHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEE
ICIVQQGDSLDKIAERYDVTISQLLRANDLESAEDVHEGQLLYIPALAGSRPFS
EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MEQSYLRFSLEESVWFKSGQEVAEFLSISLDPVISVDEYDQYITIRGALELSGEFRQADE
CCCCCEEEEHHHHHHHCCHHHHHHHHHCCCCCEEECCCCCCEEEEEEEEEECCHHHCCCC
SPQRDVDDDTFESASYRFIQHISVREDGISELLHRFPIDITIPKNRIRELDDVYVTVESF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCCCEEEEEECC
DYDLGDNGRLLVTADISISGISEAPLVDDLPDDDEDEEPLFTPFESIARKEATDDEAFAS
CCCCCCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHCC
EDRPANEVNEQPIAAVSETPSSELELAAVRHEETPSDQKEDVKEPFLPIETETKAVSAEA
CCCCCHHCCCCCCHHHHCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCHHHHHHH
EEELDNLSPPTEAKVSIGAAKKAMDEEDEEEQQTEVKSENALYLTKLFAKSGAEEFTTVK
HHHHHCCCCCCCCEEEHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEE
ICIVQQGDSLDKIAERYDVTISQLLRANDLESAEDVHEGQLLYIPALAGSRPFS
EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8449878; 9384377 [H]