| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is ysxE [H]
Identifier: 138896206
GI number: 138896206
Start: 2674028
End: 2675059
Strand: Reverse
Name: ysxE [H]
Synonym: GTNG_2569
Alternate gene names: 138896206
Gene position: 2675059-2674028 (Counterclockwise)
Preceding gene: 138896207
Following gene: 138896204
Centisome position: 75.35
GC content: 54.17
Gene sequence:
>1032_bases ATGGCCATACGGTCTGAAACGTACCGCGCCGTACTTCATCAGTATGGGCTTCAACCACAGCGCATCGAACAGCGGGGCAA AGCGGCGAAAGTGTACACTGATCGCGGTATTTTTGCCTTAAAAATGCTCGACGGCGAGCAGGAGGCGGCCGCCATTTGGC AGTCGCTTCACTATTATGGCCGCCATTGCCCTCCGGTTTATTGGACGAGGCATCGGTCGCTGTTTGCGGCGGAGGGGGGC CGCCTTTATTATTTACACGCATGGCAGGATGGAGAAGCGAGAGCAAGGGAGGAAACAGTGCGTGCCTTTTTTCACGGACT GTCTCGTCTCCATCGCGCTACCGTTCGCACCGTCGAAGTGAGCGAGGAAGAGGTCGCCGCTTATCGAAAACAAAAAAAAG AGGAATGGCAGCGGGAGCGGACGGTTTGGGAAGAGCGGATCGAGCAGTATGAAACTGCCTGGTACATGTCACCGTTTCAG CTGCAGTGCTGTACGTATTTTCATGAGGTGATGCGCGCTTATTTGTTTGCTGAGGACCAGCTGACCGCTTGGGAGGAGGC ACTCCAAGAAACGAAACAATGGCGAGTTGCTTGGGTGCACGGAAAAGCGCGTCTTTCTCATTACGTAGCACCGTATTGGA TCAGCTGGGAGCGAGCGCACTGGAATTCGCCAGTATATGATTTGATCGCTGCACTTCGCGTTCATGTCCAAACGCTTCCG CCGCTTGGACAGGAGTGGATGAGGGGGATGGATGAATACGAAAAGGAACTCCCATTATCCGCCGGGGAACGGGCATTTTT ATACAGCCATTTAGCCGAACCGCGCGGGTTTGTCCGCTGCCTTGAACAATATGAAGCTGCGCCGAGAAAGGAACGGAACG AGCGGAAATATGTTGCCGCCTTGCAGCGCTGCTATTTTGCCTTCAAAAACATGGAAGCGATTGTGATGCATCTTGTCCAA CGCGACGCTGCGCGGCAGCAAGAAGAGGCGATCAAGCATGAAGAGCCAGAACAAGGGGACGACAGCGGTTAA
Upstream 100 bases:
>100_bases CATGAAGGGCAGCTGTTATATATTCCGGCCTTGGCGGGAAGCCGTCCTTTCTCGTGAAAGGAACGCTTTCCGTTTCTTTT GCCGGTGAGGGGGCGTAACA
Downstream 100 bases:
>100_bases ATCCATTCCAAATGGAGCGCCACAGCAATCAAAACAAAGATGGCTAATAAAATGACATCGAACGTCGTTGGCAAAAAAAT GGTGCGAATGGCTTGAAAAA
Product: CotS-like protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MAIRSETYRAVLHQYGLQPQRIEQRGKAAKVYTDRGIFALKMLDGEQEAAAIWQSLHYYGRHCPPVYWTRHRSLFAAEGG RLYYLHAWQDGEARAREETVRAFFHGLSRLHRATVRTVEVSEEEVAAYRKQKKEEWQRERTVWEERIEQYETAWYMSPFQ LQCCTYFHEVMRAYLFAEDQLTAWEEALQETKQWRVAWVHGKARLSHYVAPYWISWERAHWNSPVYDLIAALRVHVQTLP PLGQEWMRGMDEYEKELPLSAGERAFLYSHLAEPRGFVRCLEQYEAAPRKERNERKYVAALQRCYFAFKNMEAIVMHLVQ RDAARQQEEAIKHEEPEQGDDSG
Sequences:
>Translated_343_residues MAIRSETYRAVLHQYGLQPQRIEQRGKAAKVYTDRGIFALKMLDGEQEAAAIWQSLHYYGRHCPPVYWTRHRSLFAAEGG RLYYLHAWQDGEARAREETVRAFFHGLSRLHRATVRTVEVSEEEVAAYRKQKKEEWQRERTVWEERIEQYETAWYMSPFQ LQCCTYFHEVMRAYLFAEDQLTAWEEALQETKQWRVAWVHGKARLSHYVAPYWISWERAHWNSPVYDLIAALRVHVQTLP PLGQEWMRGMDEYEKELPLSAGERAFLYSHLAEPRGFVRCLEQYEAAPRKERNERKYVAALQRCYFAFKNMEAIVMHLVQ RDAARQQEEAIKHEEPEQGDDSG >Mature_342_residues AIRSETYRAVLHQYGLQPQRIEQRGKAAKVYTDRGIFALKMLDGEQEAAAIWQSLHYYGRHCPPVYWTRHRSLFAAEGGR LYYLHAWQDGEARAREETVRAFFHGLSRLHRATVRTVEVSEEEVAAYRKQKKEEWQRERTVWEERIEQYETAWYMSPFQL QCCTYFHEVMRAYLFAEDQLTAWEEALQETKQWRVAWVHGKARLSHYVAPYWISWERAHWNSPVYDLIAALRVHVQTLPP LGQEWMRGMDEYEKELPLSAGERAFLYSHLAEPRGFVRCLEQYEAAPRKERNERKYVAALQRCYFAFKNMEAIVMHLVQR DAARQQEEAIKHEEPEQGDDSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR014253 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40825; Mature: 40694
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRSETYRAVLHQYGLQPQRIEQRGKAAKVYTDRGIFALKMLDGEQEAAAIWQSLHYYG CCCCHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHC RHCPPVYWTRHRSLFAAEGGRLYYLHAWQDGEARAREETVRAFFHGLSRLHRATVRTVEV CCCCCCHHHHCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC SEEEVAAYRKQKKEEWQRERTVWEERIEQYETAWYMSPFQLQCCTYFHEVMRAYLFAEDQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHH LTAWEEALQETKQWRVAWVHGKARLSHYVAPYWISWERAHWNSPVYDLIAALRVHVQTLP HHHHHHHHHHHHHHEEEEEECHHHHHHHHCCCEEEEHHCCCCCCHHHHHHHHHHHHHHCC PLGQEWMRGMDEYEKELPLSAGERAFLYSHLAEPRGFVRCLEQYEAAPRKERNERKYVAA CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHH LQRCYFAFKNMEAIVMHLVQRDAARQQEEAIKHEEPEQGDDSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AIRSETYRAVLHQYGLQPQRIEQRGKAAKVYTDRGIFALKMLDGEQEAAAIWQSLHYYG CCCHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHC RHCPPVYWTRHRSLFAAEGGRLYYLHAWQDGEARAREETVRAFFHGLSRLHRATVRTVEV CCCCCCHHHHCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC SEEEVAAYRKQKKEEWQRERTVWEERIEQYETAWYMSPFQLQCCTYFHEVMRAYLFAEDQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHH LTAWEEALQETKQWRVAWVHGKARLSHYVAPYWISWERAHWNSPVYDLIAALRVHVQTLP HHHHHHHHHHHHHHEEEEEECHHHHHHHHCCCEEEEHHCCCCCCHHHHHHHHHHHHHHCC PLGQEWMRGMDEYEKELPLSAGERAFLYSHLAEPRGFVRCLEQYEAAPRKERNERKYVAA CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHH LQRCYFAFKNMEAIVMHLVQRDAARQQEEAIKHEEPEQGDDSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8449878; 9384377 [H]