| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138896191
Identifier: 138896191
GI number: 138896191
Start: 2654830
End: 2655762
Strand: Reverse
Name: 138896191
Synonym: GTNG_2554
Alternate gene names: NA
Gene position: 2655762-2654830 (Counterclockwise)
Preceding gene: 138896192
Following gene: 138896190
Centisome position: 74.8
GC content: 56.16
Gene sequence:
>933_bases ATGGCGTTATGGCGGCGAAAGGCAAAACAAGCGAATATTGTCATTAAAGACCATGTCGTCCGTTGTGTGGAAGCGAAGCC GGGGAATCCGCCGGAGGCGAAGCGGTGGGGTGAGCGCGAACTACCGCCTGGCCTCATTCGCGACGGAAAAATCGTTGATG CGGAAACATTGGCGATGATTTTAGAGGAATGCGTCGACGAATGGAAGCTTGGCGGGCGGCGCGTCCGCTTTGTCGTCCCC GATCCGTTTGTCATGATCCGCACCGTGTCGCTTCCTCCTCATTTGCCGGACGATGACATTCGCGGATATTTGTTTATGGA ACTTGGTGAATCGATCCCGCTTCCGTTTGCCGATCCGGTGTTCGACTACGCGGTGGTCGAACGGACGGAAGAGGCGCTAA ACGTGCTATTGTTTGCTGCACCGGAGGAAGCGGTGGCGGAATATGCGGCGCTCCTTGAGGATGCTGATTTGCGGCCGGTG GCGGCCGACGTGTCGCCGCTTTGCGCTTACCGTCCGTTTTATGCCGCCGGACAAGCAGCGGCAGATGATCATATTTTGCT CGTGCAGCTTGATCGCTCGGCGGTGAATGTAAGTGCCTTTCACCGCCATTTGCCGCTGTTTATGCGCCATTTGCCGCTTG AGATGCTCGAGGAGCGAACCGTGCCGATCGTTGACCCGTTTGTGGATGTGTATAAGGAAATCGAGCGGATGATGAACTTT TATTCATTTTCTCTCCAACAAGGAAAACAGCAAATTACGCGCCTGTTCCTCATCGGTGATCACCCGCAGCTTGCCGATGC CTTCGCTGCCTTGGCGGAGCGGCTTGACGTACCGCCCGAGCGGCTTTCCTATTCACTCGATCCGCTGCCGGACCGGTATC ATCTCGCCTGGGGGCTGGCGTTGAAAGAGGGAATGACTGACGATGATCGTTGA
Upstream 100 bases:
>100_bases ATTGCGCTCGGGACGCTGACAGCGTTTTTCTTTGGCGAGGCGATGGTGCGTGCGTATCTTTCGCTTATGATGTAGGACGG TAGAAAGGAAGCAGACAACC
Downstream 100 bases:
>100_bases CATCAACTTATTGCCGCGGAAAGAGCCGCGCCATACGTTCGGCGTCGTGTTGACGGTCTTGGTCATCCTTCTTCTCCTCA TCGGCGCCGCCGGGGGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: Tfp Pilus Assembly Protein ATPase PilM; Fimbrial Assembly Family Protein
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MALWRRKAKQANIVIKDHVVRCVEAKPGNPPEAKRWGERELPPGLIRDGKIVDAETLAMILEECVDEWKLGGRRVRFVVP DPFVMIRTVSLPPHLPDDDIRGYLFMELGESIPLPFADPVFDYAVVERTEEALNVLLFAAPEEAVAEYAALLEDADLRPV AADVSPLCAYRPFYAAGQAAADDHILLVQLDRSAVNVSAFHRHLPLFMRHLPLEMLEERTVPIVDPFVDVYKEIERMMNF YSFSLQQGKQQITRLFLIGDHPQLADAFAALAERLDVPPERLSYSLDPLPDRYHLAWGLALKEGMTDDDR
Sequences:
>Translated_310_residues MALWRRKAKQANIVIKDHVVRCVEAKPGNPPEAKRWGERELPPGLIRDGKIVDAETLAMILEECVDEWKLGGRRVRFVVP DPFVMIRTVSLPPHLPDDDIRGYLFMELGESIPLPFADPVFDYAVVERTEEALNVLLFAAPEEAVAEYAALLEDADLRPV AADVSPLCAYRPFYAAGQAAADDHILLVQLDRSAVNVSAFHRHLPLFMRHLPLEMLEERTVPIVDPFVDVYKEIERMMNF YSFSLQQGKQQITRLFLIGDHPQLADAFAALAERLDVPPERLSYSLDPLPDRYHLAWGLALKEGMTDDDR >Mature_309_residues ALWRRKAKQANIVIKDHVVRCVEAKPGNPPEAKRWGERELPPGLIRDGKIVDAETLAMILEECVDEWKLGGRRVRFVVPD PFVMIRTVSLPPHLPDDDIRGYLFMELGESIPLPFADPVFDYAVVERTEEALNVLLFAAPEEAVAEYAALLEDADLRPVA ADVSPLCAYRPFYAAGQAAADDHILLVQLDRSAVNVSAFHRHLPLFMRHLPLEMLEERTVPIVDPFVDVYKEIERMMNFY SFSLQQGKQQITRLFLIGDHPQLADAFAALAERLDVPPERLSYSLDPLPDRYHLAWGLALKEGMTDDDR
Specific function: Unknown
COG id: COG4972
COG function: function code NU; Tfp pilus assembly protein, ATPase PilM
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35148; Mature: 35017
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALWRRKAKQANIVIKDHVVRCVEAKPGNPPEAKRWGERELPPGLIRDGKIVDAETLAMI CCHHHHHHHHCCEEEHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCEECHHHHHHH LEECVDEWKLGGRRVRFVVPDPFVMIRTVSLPPHLPDDDIRGYLFMELGESIPLPFADPV HHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCHH FDYAVVERTEEALNVLLFAAPEEAVAEYAALLEDADLRPVAADVSPLCAYRPFYAAGQAA HHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCCCCCHHCCCHHHHCCCHHHCCCCC ADDHILLVQLDRSAVNVSAFHRHLPLFMRHLPLEMLEERTVPIVDPFVDVYKEIERMMNF CCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH YSFSLQQGKQQITRLFLIGDHPQLADAFAALAERLDVPPERLSYSLDPLPDRYHLAWGLA HHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHH LKEGMTDDDR HHCCCCCCCC >Mature Secondary Structure ALWRRKAKQANIVIKDHVVRCVEAKPGNPPEAKRWGERELPPGLIRDGKIVDAETLAMI CHHHHHHHHCCEEEHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCEECHHHHHHH LEECVDEWKLGGRRVRFVVPDPFVMIRTVSLPPHLPDDDIRGYLFMELGESIPLPFADPV HHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCHH FDYAVVERTEEALNVLLFAAPEEAVAEYAALLEDADLRPVAADVSPLCAYRPFYAAGQAA HHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHCCCCCCCHHCCCHHHHCCCHHHCCCCC ADDHILLVQLDRSAVNVSAFHRHLPLFMRHLPLEMLEERTVPIVDPFVDVYKEIERMMNF CCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH YSFSLQQGKQQITRLFLIGDHPQLADAFAALAERLDVPPERLSYSLDPLPDRYHLAWGLA HHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHH LKEGMTDDDR HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA