| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138896190
Identifier: 138896190
GI number: 138896190
Start: 2654265
End: 2654840
Strand: Reverse
Name: 138896190
Synonym: GTNG_2553
Alternate gene names: NA
Gene position: 2654840-2654265 (Counterclockwise)
Preceding gene: 138896191
Following gene: 138896189
Centisome position: 74.78
GC content: 55.56
Gene sequence:
>576_bases ATGATCGTTGACATCAACTTATTGCCGCGGAAAGAGCCGCGCCATACGTTCGGCGTCGTGTTGACGGTCTTGGTCATCCT TCTTCTCCTCATCGGCGCCGCCGGGGGATACTGGCTGATGGAACGTGCCAACAGCCGTCAAGCGGCGCTTGAAGCGGAAT TGAAGCAAGTGCGCGCCCTGCAGGCCGCGACGGCCGCCAAACAGAAGGATGCCGAGCAACAGCAAGGGAGGCAAGAGCTG TCCAAGGCGGTGGAGTGGGCGAACCGCTATCCGTTTAAAACAGTGCCACTGTTGCGCGCGTTGACAAAAGAGTTGCCTGA GCGCGGCTTTATCATGAAATTTTCCTATGCCGACCGGCAGACGGTGACGATGACGGTTCAGTTTGATACCGCCGAAGAAG CGGCCTATTATTTAGCCCGGTTAGAGGCGGTGGACATAGTCAAAGAGGTGAAGCTGACAGAGGTTTCTGCCAGCAGCCAA AGCGGTGAAGTTGAGACGGAAATGATCGTGCCGCGCTATATGGCGCAATATGAGCTAAAAATCGGCCAAGCCGAAAAAAA GGAGACATCGCCATGA
Upstream 100 bases:
>100_bases CTTGACGTACCGCCCGAGCGGCTTTCCTATTCACTCGATCCGCTGCCGGACCGGTATCATCTCGCCTGGGGGCTGGCGTT GAAAGAGGGAATGACTGACG
Downstream 100 bases:
>100_bases CCGGTCGCGTAAACAAATGGCTAGCAGTTTCCATTGTATTGCTGCTTGTTGCCGCTGTCGGCACCGCGTTTTATTTTCTC TTGTTAGCGCCGCGCTACCA
Product: hypothetical protein
Products: NA
Alternate protein names: Fimbrial Assembly Protein PilN
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MIVDINLLPRKEPRHTFGVVLTVLVILLLLIGAAGGYWLMERANSRQAALEAELKQVRALQAATAAKQKDAEQQQGRQEL SKAVEWANRYPFKTVPLLRALTKELPERGFIMKFSYADRQTVTMTVQFDTAEEAAYYLARLEAVDIVKEVKLTEVSASSQ SGEVETEMIVPRYMAQYELKIGQAEKKETSP
Sequences:
>Translated_191_residues MIVDINLLPRKEPRHTFGVVLTVLVILLLLIGAAGGYWLMERANSRQAALEAELKQVRALQAATAAKQKDAEQQQGRQEL SKAVEWANRYPFKTVPLLRALTKELPERGFIMKFSYADRQTVTMTVQFDTAEEAAYYLARLEAVDIVKEVKLTEVSASSQ SGEVETEMIVPRYMAQYELKIGQAEKKETSP >Mature_191_residues MIVDINLLPRKEPRHTFGVVLTVLVILLLLIGAAGGYWLMERANSRQAALEAELKQVRALQAATAAKQKDAEQQQGRQEL SKAVEWANRYPFKTVPLLRALTKELPERGFIMKFSYADRQTVTMTVQFDTAEEAAYYLARLEAVDIVKEVKLTEVSASSQ SGEVETEMIVPRYMAQYELKIGQAEKKETSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21519; Mature: 21519
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVDINLLPRKEPRHTFGVVLTVLVILLLLIGAAGGYWLMERANSRQAALEAELKQVRAL CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHH QAATAAKQKDAEQQQGRQELSKAVEWANRYPFKTVPLLRALTKELPERGFIMKFSYADRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCE TVTMTVQFDTAEEAAYYLARLEAVDIVKEVKLTEVSASSQSGEVETEMIVPRYMAQYELK EEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH IGQAEKKETSP CCCCCCCCCCC >Mature Secondary Structure MIVDINLLPRKEPRHTFGVVLTVLVILLLLIGAAGGYWLMERANSRQAALEAELKQVRAL CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHH QAATAAKQKDAEQQQGRQELSKAVEWANRYPFKTVPLLRALTKELPERGFIMKFSYADRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCE TVTMTVQFDTAEEAAYYLARLEAVDIVKEVKLTEVSASSQSGEVETEMIVPRYMAQYELK EEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH IGQAEKKETSP CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA