Click here to switch to the map view.

The map label for this gene is 138896165

Identifier: 138896165

GI number: 138896165

Start: 2632196

End: 2633701

Strand: Reverse

Name: 138896165

Synonym: GTNG_2528

Alternate gene names: NA

Gene position: 2633701-2632196 (Counterclockwise)

Preceding gene: 138896166

Following gene: 138896164

Centisome position: 74.18

GC content: 56.97

Gene sequence:

>1506_bases
ATGATTATGCCTGGCATGAAAATTAAAGTGCCGACAGCAGGAGTGCCAATAAAAAAAGAAACAAAAACGTATGCACCGTC
GAAAAAGCCGAAAGTGGGAGAACATCCGTACGCGGAGACGAAACCGTTCGTTTCATTCAATATTGATGCGGAGATGGACA
CAGCTAGCGGCTCCGTCTCGGAAAATGAAGTACCAGTGAACGAGGCGCCGAAAGCAGTGGAAAAAGAAAAACCGAAGGCG
CCAGCGGCCAAAGCGCCGAAAGCGGAAGTGAAAGAAAAACCGAAAGCACCAGCGGTCGAAGCACCGAAAGCGGAGGCGAA
AGAAAAACCGAAAGCGCCAGCGGTCGAAGCACCGAAAGCGGAGGCGAAAGAAAAACCGAAAGCGCCAGCGGTCGAAGCAC
CGAAAGCGGAGGTGAAAGAAAAACCGAAAGCACCAGCGGCCAAAGCGCCGAAAGCGGAAGTGAAAGAAAAACCGAAGGCG
CCGGCGGTCGAAGCGCCAAAGGCAGAGGGGAAAGGAACAGCAAAGGCGCCGATAAGCGGGACATCGAAGGGAATGGAGAA
CAAGAAGGCGAATGTGTCAGTGAACGAAGCCCCGAATGTGCCGGTGAACGAGACACCGAACGTACCAGTGAACGAAGCGC
CGAACGTGCCGGTGAATGAAACACCGAACGTACCGGCGAACGAGGCGCCGAAAGCACCGACAGCCTATACACCGCCGCTT
ACACATACGATTCCGCCGGTCGTTCCGACCCCTCACGTTTCGTTTGCCAAATCGTTGCCGAATCTGCCACCGATTCCACC
GAAGCCGAGCAACATTTTGCCTGGCATGATGAAAGAGGAGATGGATGAAAGCCCAACTGAACTGAAAGGGGAACAAACAG
AAATAGCAGACGAAAGCGAGGAAACCCCGCCACCGTTGCCGAACATTCCGCATGTTCCAATTGCACCGATGACGGCACCA
GTTTTCGGTGTTGACCAAGGATGTGTGCCAGTGACGCCTATTTTGCCAGGAGCGGGGTTTTACATGTCTCCGCCGCCAGC
CATGCCATCTTATTCTCCGCCGCCGGGTTCGTTAGGGGGCGGCCCGGAAAATAACCCGGCTCCATTTCCGGGCATTAGCG
AAGGGAGCAATGATTCTTTAGAGTCTCCGCAGTTTTCTGAACCGGGGAAACACGGGGCTGCTGCTCCGCTTGCACCGCCA
GCTGGTGCCGCTTTCGCTGCGTCCGGTCCTGCCGCACCGGGATATGCACCATCTGGAGTGTACGCGCCGCTAGCCGGATA
TCCGCCTTTTGGGTATGTGCCTGTGTATCCACCGACTCCGTACTACGGGGGATATGCCCCTCCGGGAGTGTACGCCCAGC
CGGCTCCATACGGGTACGCGCCGCAACAAGCTGCGCAGGCGATCCCGTGGCCCGGTGCCGTTTACCCGGTAAGCCCACCC
GCCGCCGGTTCGCGCCTGTTTGCCGGACCGCCGGATGAGGAGAGCGAGCATGGGGAAGAACAGTAA

Upstream 100 bases:

>100_bases
TATTGTTCAAAAGGGCGATACCCTTTGGAAAATTGCCCAAAAATATGGGGTTGATTTTGAACAATTGAAAAAGATAAATG
GGCATTTGAGCGATCCGAAT

Downstream 100 bases:

>100_bases
CCTGACAGAAAGAGACGCCGTTGGCCGTCTCTTTTTTCTTCTTAGCCGCCAGTACCGGATTGTTATTCGGCAGGCTGTGG
CGCTGAAACCAAATGTCATT

Product: extensin protein

Products: NA

Alternate protein names: Extensin Protein

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MIMPGMKIKVPTAGVPIKKETKTYAPSKKPKVGEHPYAETKPFVSFNIDAEMDTASGSVSENEVPVNEAPKAVEKEKPKA
PAAKAPKAEVKEKPKAPAVEAPKAEAKEKPKAPAVEAPKAEAKEKPKAPAVEAPKAEVKEKPKAPAAKAPKAEVKEKPKA
PAVEAPKAEGKGTAKAPISGTSKGMENKKANVSVNEAPNVPVNETPNVPVNEAPNVPVNETPNVPANEAPKAPTAYTPPL
THTIPPVVPTPHVSFAKSLPNLPPIPPKPSNILPGMMKEEMDESPTELKGEQTEIADESEETPPPLPNIPHVPIAPMTAP
VFGVDQGCVPVTPILPGAGFYMSPPPAMPSYSPPPGSLGGGPENNPAPFPGISEGSNDSLESPQFSEPGKHGAAAPLAPP
AGAAFAASGPAAPGYAPSGVYAPLAGYPPFGYVPVYPPTPYYGGYAPPGVYAQPAPYGYAPQQAAQAIPWPGAVYPVSPP
AAGSRLFAGPPDEESEHGEEQ

Sequences:

>Translated_501_residues
MIMPGMKIKVPTAGVPIKKETKTYAPSKKPKVGEHPYAETKPFVSFNIDAEMDTASGSVSENEVPVNEAPKAVEKEKPKA
PAAKAPKAEVKEKPKAPAVEAPKAEAKEKPKAPAVEAPKAEAKEKPKAPAVEAPKAEVKEKPKAPAAKAPKAEVKEKPKA
PAVEAPKAEGKGTAKAPISGTSKGMENKKANVSVNEAPNVPVNETPNVPVNEAPNVPVNETPNVPANEAPKAPTAYTPPL
THTIPPVVPTPHVSFAKSLPNLPPIPPKPSNILPGMMKEEMDESPTELKGEQTEIADESEETPPPLPNIPHVPIAPMTAP
VFGVDQGCVPVTPILPGAGFYMSPPPAMPSYSPPPGSLGGGPENNPAPFPGISEGSNDSLESPQFSEPGKHGAAAPLAPP
AGAAFAASGPAAPGYAPSGVYAPLAGYPPFGYVPVYPPTPYYGGYAPPGVYAQPAPYGYAPQQAAQAIPWPGAVYPVSPP
AAGSRLFAGPPDEESEHGEEQ
>Mature_501_residues
MIMPGMKIKVPTAGVPIKKETKTYAPSKKPKVGEHPYAETKPFVSFNIDAEMDTASGSVSENEVPVNEAPKAVEKEKPKA
PAAKAPKAEVKEKPKAPAVEAPKAEAKEKPKAPAVEAPKAEAKEKPKAPAVEAPKAEVKEKPKAPAAKAPKAEVKEKPKA
PAVEAPKAEGKGTAKAPISGTSKGMENKKANVSVNEAPNVPVNETPNVPVNEAPNVPVNETPNVPANEAPKAPTAYTPPL
THTIPPVVPTPHVSFAKSLPNLPPIPPKPSNILPGMMKEEMDESPTELKGEQTEIADESEETPPPLPNIPHVPIAPMTAP
VFGVDQGCVPVTPILPGAGFYMSPPPAMPSYSPPPGSLGGGPENNPAPFPGISEGSNDSLESPQFSEPGKHGAAAPLAPP
AGAAFAASGPAAPGYAPSGVYAPLAGYPPFGYVPVYPPTPYYGGYAPPGVYAQPAPYGYAPQQAAQAIPWPGAVYPVSPP
AAGSRLFAGPPDEESEHGEEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51657; Mature: 51657

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMPGMKIKVPTAGVPIKKETKTYAPSKKPKVGEHPYAETKPFVSFNIDAEMDTASGSVS
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
ENEVPVNEAPKAVEKEKPKAPAAKAPKAEVKEKPKAPAVEAPKAEAKEKPKAPAVEAPKA
CCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCH
EAKEKPKAPAVEAPKAEVKEKPKAPAAKAPKAEVKEKPKAPAVEAPKAEGKGTAKAPISG
HHHHCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
TSKGMENKKANVSVNEAPNVPVNETPNVPVNEAPNVPVNETPNVPANEAPKAPTAYTPPL
CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
THTIPPVVPTPHVSFAKSLPNLPPIPPKPSNILPGMMKEEMDESPTELKGEQTEIADESE
CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCHHHHCCCCC
ETPPPLPNIPHVPIAPMTAPVFGVDQGCVPVTPILPGAGFYMSPPPAMPSYSPPPGSLGG
CCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPENNPAPFPGISEGSNDSLESPQFSEPGKHGAAAPLAPPAGAAFAASGPAAPGYAPSGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
YAPLAGYPPFGYVPVYPPTPYYGGYAPPGVYAQPAPYGYAPQQAAQAIPWPGAVYPVSPP
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCC
AAGSRLFAGPPDEESEHGEEQ
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIMPGMKIKVPTAGVPIKKETKTYAPSKKPKVGEHPYAETKPFVSFNIDAEMDTASGSVS
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
ENEVPVNEAPKAVEKEKPKAPAAKAPKAEVKEKPKAPAVEAPKAEAKEKPKAPAVEAPKA
CCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCH
EAKEKPKAPAVEAPKAEVKEKPKAPAAKAPKAEVKEKPKAPAVEAPKAEGKGTAKAPISG
HHHHCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
TSKGMENKKANVSVNEAPNVPVNETPNVPVNEAPNVPVNETPNVPANEAPKAPTAYTPPL
CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
THTIPPVVPTPHVSFAKSLPNLPPIPPKPSNILPGMMKEEMDESPTELKGEQTEIADESE
CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCHHHHCCCCC
ETPPPLPNIPHVPIAPMTAPVFGVDQGCVPVTPILPGAGFYMSPPPAMPSYSPPPGSLGG
CCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPENNPAPFPGISEGSNDSLESPQFSEPGKHGAAAPLAPPAGAAFAASGPAAPGYAPSGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
YAPLAGYPPFGYVPVYPPTPYYGGYAPPGVYAQPAPYGYAPQQAAQAIPWPGAVYPVSPP
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCC
AAGSRLFAGPPDEESEHGEEQ
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA