| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is cshB [H]
Identifier: 138896049
GI number: 138896049
Start: 2520702
End: 2522012
Strand: Reverse
Name: cshB [H]
Synonym: GTNG_2412
Alternate gene names: 138896049
Gene position: 2522012-2520702 (Counterclockwise)
Preceding gene: 138896052
Following gene: 138896048
Centisome position: 71.04
GC content: 50.57
Gene sequence:
>1311_bases ATGGCAGAGACGCAATTTACCCGGTTTCCATTTCAGCCATTTGTGATCGAGGCGATTCAAGCGCTTCGTTTTTATAAGCC GACGGAAATTCAAGAGCGCATCATTCCGAGAGCATTGCGTGGGGAAAGCATGGTTGGCCAGTCGCAGACTGGGACGGGAA AAACACACGCCTATTTATTGCCGATCATCGAAAAGATCGACCCGGAGCGCGCTGAAGTGCAGGCAGTCATTACAGCGCCG ACGCGCGAGTTGGCGACGCAAATTTACCATGAAACGTTAAAGATCACGAAATTTTGCCCGAAAGACCGGATGATTGTCGC TCGCTGTTTCATCGGTGGGACGGATAAGCAAAAGGCGCTTGAAAAGCTCCACGTGCAGCCGCATATTGTGATCGGTACGC CTGGGCGCATTAACGATTTTATCCGCGAGCAGGCGCTTGATGTACACACGGCGCGCACCCTCGTCGTCGATGAAGCCGAT TTAATGCTCGATATGGGGTTTATCACCGATGTCGACCAAATCGCGGCCCGGATGCCGAAAGAGCTGCAAATGCTTGTCTT TTCGGCGACGATTCCGGAAAAGCTGAAGCCATTTTTGAAAAAATATATGGAAAATCCGACATTCATCCAGGTCGAGCCGA AACAGACAGCGAATAAAAACATTGAGCATGTGCTCATTCCACTACGCGGCCGTGAAAAGGTCAAGCTGCTTTATGATGTG CTTGTCAGCTACAATCCATATTTAGCCATTGTGTTCGTGAATACGAGAAAGAGGGCTGATGAAGTCGCCGATCAGCTTGC CGAACAAGGACTGAAAGTCGGTGTATTGCACGGTGATTTGACGCCGCGCGAGCGGAAAAAGATGATGAACCAAATTCGCG ATTTGGAGTTTCAATACGTCGTTGCCACTGATTTGGCGGCGCGCGGCATTGATATCGAAGGCGTGAGCCATGTCATCAAC TATGAGTTGCCCGATGATTTGCAGTTTTACATTCATCGAGCTGGGAGGACGGCACGCGCCGGTTATAGCGGCATTGCGGC GACCATTTACGAACCGACCGACCAAGATGCGATTGCTCGATTGGAAAAAATGGGGATTTCATTTGTTCATCGCGACCTCG TGCGTGGTGAATGGAAGGATCTTCCACCTTGGAATCGGCGGAGCAAGCGAGCTGGTGAGAAGGAAGATGACCTCGCGCTG CTTGTTGCGAAGCTGAAAAAAGCGAAACAAGTGAAACCGGGCTATAAGAAAAAGCTGCGCGCCGAGCTTGAGAAGAAGAA AAAGCGGCTGAGCCGCTTCAAAAAATCGTAG
Upstream 100 bases:
>100_bases AGGTTTTTCAGCTGCCATCGTCTTTAGTTGCGGTGGGCCGCAAATATTCGCTATAATGATGGAGCGTACAAAGGACGTAT ATAGAAGGGAGTGGTACTTG
Downstream 100 bases:
>100_bases TCTTCGTTGTGTATGGAGATAAAAGGGAGAGAAGGACATGTTAAAAATCGGTTCACACGTTTCGATGAGCGGCAAAAAAA TGCTGCTCGCCGCCAGTGAG
Product: DEAD-box ATP dependent DNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MAETQFTRFPFQPFVIEAIQALRFYKPTEIQERIIPRALRGESMVGQSQTGTGKTHAYLLPIIEKIDPERAEVQAVITAP TRELATQIYHETLKITKFCPKDRMIVARCFIGGTDKQKALEKLHVQPHIVIGTPGRINDFIREQALDVHTARTLVVDEAD LMLDMGFITDVDQIAARMPKELQMLVFSATIPEKLKPFLKKYMENPTFIQVEPKQTANKNIEHVLIPLRGREKVKLLYDV LVSYNPYLAIVFVNTRKRADEVADQLAEQGLKVGVLHGDLTPRERKKMMNQIRDLEFQYVVATDLAARGIDIEGVSHVIN YELPDDLQFYIHRAGRTARAGYSGIAATIYEPTDQDAIARLEKMGISFVHRDLVRGEWKDLPPWNRRSKRAGEKEDDLAL LVAKLKKAKQVKPGYKKKLRAELEKKKKRLSRFKKS
Sequences:
>Translated_436_residues MAETQFTRFPFQPFVIEAIQALRFYKPTEIQERIIPRALRGESMVGQSQTGTGKTHAYLLPIIEKIDPERAEVQAVITAP TRELATQIYHETLKITKFCPKDRMIVARCFIGGTDKQKALEKLHVQPHIVIGTPGRINDFIREQALDVHTARTLVVDEAD LMLDMGFITDVDQIAARMPKELQMLVFSATIPEKLKPFLKKYMENPTFIQVEPKQTANKNIEHVLIPLRGREKVKLLYDV LVSYNPYLAIVFVNTRKRADEVADQLAEQGLKVGVLHGDLTPRERKKMMNQIRDLEFQYVVATDLAARGIDIEGVSHVIN YELPDDLQFYIHRAGRTARAGYSGIAATIYEPTDQDAIARLEKMGISFVHRDLVRGEWKDLPPWNRRSKRAGEKEDDLAL LVAKLKKAKQVKPGYKKKLRAELEKKKKRLSRFKKS >Mature_435_residues AETQFTRFPFQPFVIEAIQALRFYKPTEIQERIIPRALRGESMVGQSQTGTGKTHAYLLPIIEKIDPERAEVQAVITAPT RELATQIYHETLKITKFCPKDRMIVARCFIGGTDKQKALEKLHVQPHIVIGTPGRINDFIREQALDVHTARTLVVDEADL MLDMGFITDVDQIAARMPKELQMLVFSATIPEKLKPFLKKYMENPTFIQVEPKQTANKNIEHVLIPLRGREKVKLLYDVL VSYNPYLAIVFVNTRKRADEVADQLAEQGLKVGVLHGDLTPRERKKMMNQIRDLEFQYVVATDLAARGIDIEGVSHVINY ELPDDLQFYIHRAGRTARAGYSGIAATIYEPTDQDAIARLEKMGISFVHRDLVRGEWKDLPPWNRRSKRAGEKEDDLALL VAKLKKAKQVKPGYKKKLRAELEKKKKRLSRFKKS
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=350, Percent_Identity=32.8571428571429, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI21040371, Length=348, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI83700235, Length=330, Percent_Identity=33.6363636363636, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI50659095, Length=386, Percent_Identity=34.4559585492228, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI169881239, Length=371, Percent_Identity=32.6145552560647, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI13514809, Length=371, Percent_Identity=32.6145552560647, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI4758138, Length=366, Percent_Identity=33.879781420765, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI4758112, Length=350, Percent_Identity=32.5714285714286, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI18375623, Length=350, Percent_Identity=32.5714285714286, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI45446747, Length=366, Percent_Identity=32.5136612021858, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI45446743, Length=366, Percent_Identity=32.5136612021858, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI301171467, Length=371, Percent_Identity=32.3450134770889, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI301171475, Length=371, Percent_Identity=32.3450134770889, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI87196351, Length=371, Percent_Identity=32.3450134770889, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI13129006, Length=385, Percent_Identity=33.2467532467532, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI164664518, Length=360, Percent_Identity=29.4444444444444, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI148613856, Length=359, Percent_Identity=33.983286908078, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI38201710, Length=359, Percent_Identity=33.983286908078, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI4503529, Length=331, Percent_Identity=32.9305135951662, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI224593278, Length=343, Percent_Identity=33.5276967930029, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI41327771, Length=378, Percent_Identity=33.0687830687831, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI262118318, Length=351, Percent_Identity=33.9031339031339, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI222352149, Length=361, Percent_Identity=32.1329639889197, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI216548263, Length=351, Percent_Identity=33.9031339031339, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI262231852, Length=351, Percent_Identity=33.9031339031339, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI13518015, Length=351, Percent_Identity=33.9031339031339, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI21071032, Length=376, Percent_Identity=30.5851063829787, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI51094101, Length=344, Percent_Identity=33.1395348837209, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI164419743, Length=344, Percent_Identity=33.1395348837209, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI20149629, Length=351, Percent_Identity=31.9088319088319, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI256223453, Length=343, Percent_Identity=32.9446064139942, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI188035877, Length=326, Percent_Identity=31.2883435582822, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI31542656, Length=371, Percent_Identity=31.8059299191375, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI164419732, Length=356, Percent_Identity=30.3370786516854, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI8922886, Length=357, Percent_Identity=29.9719887955182, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI6005743, Length=357, Percent_Identity=29.9719887955182, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI13514831, Length=368, Percent_Identity=30.9782608695652, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI41327779, Length=373, Percent_Identity=31.3672922252011, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI41327773, Length=344, Percent_Identity=31.9767441860465, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI62241022, Length=341, Percent_Identity=30.4985337243402, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI55749865, Length=364, Percent_Identity=27.7472527472527, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=27.9596977329975, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI62241024, Length=319, Percent_Identity=30.4075235109718, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI38569505, Length=342, Percent_Identity=31.5789473684211, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI38569503, Length=342, Percent_Identity=31.5789473684211, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI41327776, Length=352, Percent_Identity=30.1136363636364, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI38327634, Length=341, Percent_Identity=29.9120234604106, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI17505907, Length=425, Percent_Identity=27.5294117647059, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=29.0419161676647, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI9966805, Length=358, Percent_Identity=29.608938547486, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI256773275, Length=400, Percent_Identity=26.25, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI154759257, Length=363, Percent_Identity=25.8953168044077, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI20336298, Length=218, Percent_Identity=31.1926605504587, Blast_Score=93, Evalue=4e-19, Organism=Escherichia coli, GI87082221, Length=361, Percent_Identity=35.7340720221607, Blast_Score=239, Evalue=3e-64, Organism=Escherichia coli, GI1790214, Length=358, Percent_Identity=35.7541899441341, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1787605, Length=340, Percent_Identity=34.7058823529412, Blast_Score=213, Evalue=1e-56, Organism=Escherichia coli, GI1787016, Length=365, Percent_Identity=32.6027397260274, Blast_Score=211, Evalue=1e-55, Organism=Escherichia coli, GI1788930, Length=361, Percent_Identity=35.4570637119114, Blast_Score=186, Evalue=3e-48, Organism=Caenorhabditis elegans, GI71987143, Length=359, Percent_Identity=34.2618384401114, Blast_Score=225, Evalue=4e-59, Organism=Caenorhabditis elegans, GI71995724, Length=350, Percent_Identity=33.4285714285714, Blast_Score=218, Evalue=7e-57, Organism=Caenorhabditis elegans, GI17507121, Length=350, Percent_Identity=33.1428571428571, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17510307, Length=400, Percent_Identity=34, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17510309, Length=400, Percent_Identity=34, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71995514, Length=400, Percent_Identity=34, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI71995718, Length=402, Percent_Identity=33.3333333333333, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17552114, Length=338, Percent_Identity=32.2485207100592, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17555296, Length=361, Percent_Identity=31.0249307479224, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71982858, Length=350, Percent_Identity=33.1428571428571, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17552642, Length=368, Percent_Identity=34.7826086956522, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=33.0687830687831, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17507945, Length=371, Percent_Identity=31.266846361186, Blast_Score=187, Evalue=8e-48, Organism=Caenorhabditis elegans, GI86570094, Length=355, Percent_Identity=34.0845070422535, Blast_Score=186, Evalue=1e-47, Organism=Caenorhabditis elegans, GI115533224, Length=359, Percent_Identity=32.3119777158774, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17537549, Length=357, Percent_Identity=32.7731092436975, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71999646, Length=338, Percent_Identity=31.0650887573964, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71999644, Length=338, Percent_Identity=31.0650887573964, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17509811, Length=374, Percent_Identity=31.0160427807487, Blast_Score=178, Evalue=6e-45, Organism=Caenorhabditis elegans, GI193206561, Length=384, Percent_Identity=29.4270833333333, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI17507877, Length=353, Percent_Identity=33.9943342776204, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17507879, Length=353, Percent_Identity=33.7110481586402, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17510559, Length=370, Percent_Identity=30.5405405405405, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17553716, Length=350, Percent_Identity=29.7142857142857, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17536099, Length=379, Percent_Identity=30.6068601583113, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17536101, Length=376, Percent_Identity=30.0531914893617, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI17507881, Length=358, Percent_Identity=32.4022346368715, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17536103, Length=377, Percent_Identity=29.973474801061, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=28.5714285714286, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=28.5714285714286, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17507641, Length=398, Percent_Identity=30.6532663316583, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI193208216, Length=394, Percent_Identity=30.7106598984772, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI32564046, Length=379, Percent_Identity=30.6068601583113, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI25148203, Length=406, Percent_Identity=26.6009852216749, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI71990816, Length=377, Percent_Identity=28.9124668435013, Blast_Score=144, Evalue=6e-35, Organism=Caenorhabditis elegans, GI17508543, Length=375, Percent_Identity=29.3333333333333, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17505370, Length=347, Percent_Identity=29.1066282420749, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=34.6153846153846, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI25148205, Length=330, Percent_Identity=26.3636363636364, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17556951, Length=317, Percent_Identity=27.4447949526814, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI25148291, Length=397, Percent_Identity=23.1738035264484, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71997889, Length=386, Percent_Identity=25.9067357512953, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17566630, Length=341, Percent_Identity=25.5131964809384, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=38.1443298969072, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324778, Length=384, Percent_Identity=33.59375, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6325138, Length=376, Percent_Identity=33.5106382978723, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6324217, Length=368, Percent_Identity=35.054347826087, Blast_Score=213, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6323021, Length=361, Percent_Identity=34.0720221606648, Blast_Score=213, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6320224, Length=369, Percent_Identity=32.2493224932249, Blast_Score=207, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320119, Length=367, Percent_Identity=32.1525885558583, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320041, Length=340, Percent_Identity=32.6470588235294, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6324620, Length=354, Percent_Identity=32.2033898305085, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6321360, Length=346, Percent_Identity=34.1040462427746, Blast_Score=190, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6320173, Length=401, Percent_Identity=28.6783042394015, Blast_Score=176, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6320449, Length=365, Percent_Identity=32.6027397260274, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6322912, Length=342, Percent_Identity=34.2105263157895, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322323, Length=342, Percent_Identity=34.2105263157895, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321267, Length=370, Percent_Identity=34.5945945945946, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321963, Length=373, Percent_Identity=31.6353887399464, Blast_Score=169, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6321111, Length=391, Percent_Identity=30.4347826086957, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6322427, Length=373, Percent_Identity=31.3672922252011, Blast_Score=166, Evalue=9e-42, Organism=Saccharomyces cerevisiae, GI6319714, Length=360, Percent_Identity=29.4444444444444, Blast_Score=157, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6323947, Length=339, Percent_Identity=33.0383480825959, Blast_Score=155, Evalue=8e-39, Organism=Saccharomyces cerevisiae, GI6323306, Length=418, Percent_Identity=27.2727272727273, Blast_Score=155, Evalue=9e-39, Organism=Saccharomyces cerevisiae, GI6319618, Length=422, Percent_Identity=27.7251184834123, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6320400, Length=372, Percent_Identity=29.0322580645161, Blast_Score=136, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6324366, Length=409, Percent_Identity=25.6723716381418, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6322876, Length=218, Percent_Identity=30.7339449541284, Blast_Score=94, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6321374, Length=379, Percent_Identity=25.3298153034301, Blast_Score=86, Evalue=9e-18, Organism=Drosophila melanogaster, GI24645031, Length=352, Percent_Identity=32.9545454545455, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI28574962, Length=364, Percent_Identity=34.8901098901099, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI24584399, Length=362, Percent_Identity=34.2541436464088, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24583281, Length=360, Percent_Identity=31.1111111111111, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI24583279, Length=360, Percent_Identity=31.1111111111111, Blast_Score=201, Evalue=6e-52, Organism=Drosophila melanogaster, GI17985987, Length=384, Percent_Identity=32.5520833333333, Blast_Score=201, Evalue=6e-52, Organism=Drosophila melanogaster, GI21355075, Length=363, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=7e-52, Organism=Drosophila melanogaster, GI24582080, Length=319, Percent_Identity=32.9153605015674, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24582078, Length=319, Percent_Identity=32.9153605015674, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI17136248, Length=319, Percent_Identity=32.9153605015674, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24582075, Length=319, Percent_Identity=32.9153605015674, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24644479, Length=358, Percent_Identity=33.7988826815642, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI24644483, Length=358, Percent_Identity=33.7988826815642, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI21356161, Length=355, Percent_Identity=34.0845070422535, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24644487, Length=358, Percent_Identity=33.7988826815642, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI45551833, Length=358, Percent_Identity=33.7988826815642, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24644485, Length=358, Percent_Identity=33.7988826815642, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI281361218, Length=358, Percent_Identity=33.7988826815642, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24644481, Length=358, Percent_Identity=33.7988826815642, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24581954, Length=349, Percent_Identity=33.5243553008596, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24581952, Length=349, Percent_Identity=33.5243553008596, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24581956, Length=349, Percent_Identity=33.5243553008596, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI18857967, Length=401, Percent_Identity=32.6683291770574, Blast_Score=188, Evalue=6e-48, Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=32.3369565217391, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI17977678, Length=367, Percent_Identity=32.425068119891, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24585582, Length=357, Percent_Identity=31.9327731092437, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24584994, Length=378, Percent_Identity=31.2169312169312, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI28575014, Length=338, Percent_Identity=30.1775147928994, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI281365720, Length=318, Percent_Identity=34.5911949685535, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI17136814, Length=371, Percent_Identity=32.6145552560647, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI17647335, Length=344, Percent_Identity=32.2674418604651, Blast_Score=168, Evalue=6e-42, Organism=Drosophila melanogaster, GI24642151, Length=346, Percent_Identity=31.5028901734104, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=29.6296296296296, Blast_Score=151, Evalue=9e-37, Organism=Drosophila melanogaster, GI28571808, Length=349, Percent_Identity=30.3724928366762, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI28571809, Length=349, Percent_Identity=30.3724928366762, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI24666101, Length=355, Percent_Identity=29.0140845070423, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24643725, Length=373, Percent_Identity=28.9544235924933, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI18859659, Length=439, Percent_Identity=26.6514806378132, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI28571338, Length=439, Percent_Identity=26.6514806378132, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24668515, Length=429, Percent_Identity=27.7389277389277, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI21355559, Length=370, Percent_Identity=27.2972972972973, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24640164, Length=354, Percent_Identity=25.1412429378531, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI19920478, Length=336, Percent_Identity=27.9761904761905, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI20130173, Length=443, Percent_Identity=24.6049661399549, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI17136666, Length=423, Percent_Identity=25.7683215130024, Blast_Score=104, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49923; Mature: 49792
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETQFTRFPFQPFVIEAIQALRFYKPTEIQERIIPRALRGESMVGQSQTGTGKTHAYLL CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH PIIEKIDPERAEVQAVITAPTRELATQIYHETLKITKFCPKDRMIVARCFIGGTDKQKAL HHHHHCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHH EKLHVQPHIVIGTPGRINDFIREQALDVHTARTLVVDEADLMLDMGFITDVDQIAARMPK HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEEEECHHHHEECHHHCCHHHHHHHCCH ELQMLVFSATIPEKLKPFLKKYMENPTFIQVEPKQTANKNIEHVLIPLRGREKVKLLYDV HHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHH LVSYNPYLAIVFVNTRKRADEVADQLAEQGLKVGVLHGDLTPRERKKMMNQIRDLEFQYV HHCCCCEEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEE VATDLAARGIDIEGVSHVINYELPDDLQFYIHRAGRTARAGYSGIAATIYEPTDQDAIAR EEEHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHH LEKMGISFVHRDLVRGEWKDLPPWNRRSKRAGEKEDDLALLVAKLKKAKQVKPGYKKKLR HHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH AELEKKKKRLSRFKKS HHHHHHHHHHHHHCCC >Mature Secondary Structure AETQFTRFPFQPFVIEAIQALRFYKPTEIQERIIPRALRGESMVGQSQTGTGKTHAYLL CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH PIIEKIDPERAEVQAVITAPTRELATQIYHETLKITKFCPKDRMIVARCFIGGTDKQKAL HHHHHCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHH EKLHVQPHIVIGTPGRINDFIREQALDVHTARTLVVDEADLMLDMGFITDVDQIAARMPK HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEEEECHHHHEECHHHCCHHHHHHHCCH ELQMLVFSATIPEKLKPFLKKYMENPTFIQVEPKQTANKNIEHVLIPLRGREKVKLLYDV HHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHH LVSYNPYLAIVFVNTRKRADEVADQLAEQGLKVGVLHGDLTPRERKKMMNQIRDLEFQYV HHCCCCEEEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEE VATDLAARGIDIEGVSHVINYELPDDLQFYIHRAGRTARAGYSGIAATIYEPTDQDAIAR EEEHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHH LEKMGISFVHRDLVRGEWKDLPPWNRRSKRAGEKEDDLALLVAKLKKAKQVKPGYKKKLR HHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH AELEKKKKRLSRFKKS HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]