Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is yqgE [H]
Identifier: 138896036
GI number: 138896036
Start: 2510410
End: 2511702
Strand: Reverse
Name: yqgE [H]
Synonym: GTNG_2399
Alternate gene names: 138896036
Gene position: 2511702-2510410 (Counterclockwise)
Preceding gene: 138896037
Following gene: 138896035
Centisome position: 70.75
GC content: 48.49
Gene sequence:
>1293_bases ATGTCATTATTTGAAAAATTGACTGGCCAAGAACGGGTGGACCGTGATTTGCTGCTGCTTCTTTTTATCGGTGGGTTTTA TTCGCTTGCTGTATCGCTGTCAAATACGTTTGTCAACATTTATCTATGGAAACAGACCGGTGATTTTCGAGACTTGGCGC TGTATAATTTGGCGGTCGTCATCATGCAGCCGCTGACGTTTATATTCGCCGGCCGGCTGGCGAAACAGATCGACCGCATT CTCATCCTACGGCTTGGGGTGTCGTGTTTAGCCGTTTTTTTTGTCACCGTTTTGCTTGTTGGTTCCCGCGCCCATCAATA TTTGCTCTTTCTCGGCGCACTGTTGGGGATCGGCTATGGCTTTTATTGGCTGGCGTTTAACGTGTTGACATTTGAAATTA CGGAACCAGAGACGCGCGACTTTTTTAACAGTTTCTTCGGAGTGCTGACATCATCAGCCGGCATGATCGGACCGATTGCC GCCGGTTATATGATCTCATCGCTCGCCGGTCTGAAAGGGTATACGCTCGTTTTCTCGATGTCACTTGGCTTGTTTATTAT CGCTGTACTGCTCAGCTTCTTTCTCAAACGTCGCACAGCGGCGGGAAAATATTTATTTGTTCACATTTTAAAGGAACGCA ATAAAAACCGGAACTGGCGGCTCATTACGAATGCGCACTTTTTTCAAGGATTGCGTGAAGGTTCGTTTGTGTTCGTCATT TCGGTGTTGGTGTATGTCACCTCGAACAGCGAATGGGCGCTTGGCAAGTATGGGCTCGTCAATTCATTTACATCGTTTGT CGCCTATTATGCGGTTTCCCGGCTGATGAAACGGGAATATCGGATGAAAGCCATTTTATTAGGTGGACTGTTGCTATATG CAGCCATTTTTCTTATTGTCTTTCAGCCGTCTTACCCCCGCTTGATTATTTATGCTGCCACGATCGCCATCGCTTACCCG CTTTTGCTCGTTCCGTATTCATCGTTAACGTTTGATGTGATAGGTAAAAGTTGGAAATCAGCAGAAGCGCGTGTTGAGTA CATTGTCGTCCGCGAGCTGTTTTTGAACGTTGGGAGGGTGGCATCGATTTTAGCCTTTTTAGCGGCAATGGCACTCTTCG GGGAAAAGATCGGCATTCGCGTTCTCATGTTTGTGTGTGGGGCTGGACATTTGGTGATTTACTGGTTTGTCCGTCGCATT CGCTTCACGGATGGCCACCCGGAGCGGGATCGACAAGAGCCGCTTCTGCTTCGGACGAAACTGGCCGGCGAACGGGGCGG TCCGTCGGGGTAA
Upstream 100 bases:
>100_bases GCGGGGCGAATGAGTCGCCCCGTTTTTTTCATTAACTTAAAAGTGCATAGCAGCAGCGGAAATGGTCACACTACCGGATA GATGAAAAGGGGAGTTTGCG
Downstream 100 bases:
>100_bases AAGGGTTGCCCATGTTTTTCCCTAGCCATGCCTGCCTTTTTCTTTTACAATAGGGAGAGGGAAAGGAGGACCGGGGGATG AAACGGAAAAAGCGGGCGCA
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSLFEKLTGQERVDRDLLLLLFIGGFYSLAVSLSNTFVNIYLWKQTGDFRDLALYNLAVVIMQPLTFIFAGRLAKQIDRI LILRLGVSCLAVFFVTVLLVGSRAHQYLLFLGALLGIGYGFYWLAFNVLTFEITEPETRDFFNSFFGVLTSSAGMIGPIA AGYMISSLAGLKGYTLVFSMSLGLFIIAVLLSFFLKRRTAAGKYLFVHILKERNKNRNWRLITNAHFFQGLREGSFVFVI SVLVYVTSNSEWALGKYGLVNSFTSFVAYYAVSRLMKREYRMKAILLGGLLLYAAIFLIVFQPSYPRLIIYAATIAIAYP LLLVPYSSLTFDVIGKSWKSAEARVEYIVVRELFLNVGRVASILAFLAAMALFGEKIGIRVLMFVCGAGHLVIYWFVRRI RFTDGHPERDRQEPLLLRTKLAGERGGPSG
Sequences:
>Translated_430_residues MSLFEKLTGQERVDRDLLLLLFIGGFYSLAVSLSNTFVNIYLWKQTGDFRDLALYNLAVVIMQPLTFIFAGRLAKQIDRI LILRLGVSCLAVFFVTVLLVGSRAHQYLLFLGALLGIGYGFYWLAFNVLTFEITEPETRDFFNSFFGVLTSSAGMIGPIA AGYMISSLAGLKGYTLVFSMSLGLFIIAVLLSFFLKRRTAAGKYLFVHILKERNKNRNWRLITNAHFFQGLREGSFVFVI SVLVYVTSNSEWALGKYGLVNSFTSFVAYYAVSRLMKREYRMKAILLGGLLLYAAIFLIVFQPSYPRLIIYAATIAIAYP LLLVPYSSLTFDVIGKSWKSAEARVEYIVVRELFLNVGRVASILAFLAAMALFGEKIGIRVLMFVCGAGHLVIYWFVRRI RFTDGHPERDRQEPLLLRTKLAGERGGPSG >Mature_429_residues SLFEKLTGQERVDRDLLLLLFIGGFYSLAVSLSNTFVNIYLWKQTGDFRDLALYNLAVVIMQPLTFIFAGRLAKQIDRIL ILRLGVSCLAVFFVTVLLVGSRAHQYLLFLGALLGIGYGFYWLAFNVLTFEITEPETRDFFNSFFGVLTSSAGMIGPIAA GYMISSLAGLKGYTLVFSMSLGLFIIAVLLSFFLKRRTAAGKYLFVHILKERNKNRNWRLITNAHFFQGLREGSFVFVIS VLVYVTSNSEWALGKYGLVNSFTSFVAYYAVSRLMKREYRMKAILLGGLLLYAAIFLIVFQPSYPRLIIYAATIAIAYPL LLVPYSSLTFDVIGKSWKSAEARVEYIVVRELFLNVGRVASILAFLAAMALFGEKIGIRVLMFVCGAGHLVIYWFVRRIR FTDGHPERDRQEPLLLRTKLAGERGGPSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48430; Mature: 48299
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: PS00217 SUGAR_TRANSPORT_2 ; PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFEKLTGQERVDRDLLLLLFIGGFYSLAVSLSNTFVNIYLWKQTGDFRDLALYNLAVV CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHH IMQPLTFIFAGRLAKQIDRILILRLGVSCLAVFFVTVLLVGSRAHQYLLFLGALLGIGYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FYWLAFNVLTFEITEPETRDFFNSFFGVLTSSAGMIGPIAAGYMISSLAGLKGYTLVFSM HHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH SLGLFIIAVLLSFFLKRRTAAGKYLFVHILKERNKNRNWRLITNAHFFQGLREGSFVFVI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCHHHHH SVLVYVTSNSEWALGKYGLVNSFTSFVAYYAVSRLMKREYRMKAILLGGLLLYAAIFLIV HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQPSYPRLIIYAATIAIAYPLLLVPYSSLTFDVIGKSWKSAEARVEYIVVRELFLNVGRV CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ASILAFLAAMALFGEKIGIRVLMFVCGAGHLVIYWFVRRIRFTDGHPERDRQEPLLLRTK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH LAGERGGPSG HCCCCCCCCC >Mature Secondary Structure SLFEKLTGQERVDRDLLLLLFIGGFYSLAVSLSNTFVNIYLWKQTGDFRDLALYNLAVV CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHH IMQPLTFIFAGRLAKQIDRILILRLGVSCLAVFFVTVLLVGSRAHQYLLFLGALLGIGYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FYWLAFNVLTFEITEPETRDFFNSFFGVLTSSAGMIGPIAAGYMISSLAGLKGYTLVFSM HHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH SLGLFIIAVLLSFFLKRRTAAGKYLFVHILKERNKNRNWRLITNAHFFQGLREGSFVFVI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCHHHHH SVLVYVTSNSEWALGKYGLVNSFTSFVAYYAVSRLMKREYRMKAILLGGLLLYAAIFLIV HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQPSYPRLIIYAATIAIAYPLLLVPYSSLTFDVIGKSWKSAEARVEYIVVRELFLNVGRV CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ASILAFLAAMALFGEKIGIRVLMFVCGAGHLVIYWFVRRIRFTDGHPERDRQEPLLLRTK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH LAGERGGPSG HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]