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The map label for this gene is lipO [H]

Identifier: 138895429

GI number: 138895429

Start: 1876034

End: 1877677

Strand: Reverse

Name: lipO [H]

Synonym: GTNG_1773

Alternate gene names: 138895429

Gene position: 1877677-1876034 (Counterclockwise)

Preceding gene: 138895430

Following gene: 138895428

Centisome position: 52.89

GC content: 42.52

Gene sequence:

>1644_bases
GTGTTAAAAAAGGTTTTTACCACTTTAACGGTAACCGTGCTGACAGCTGGAGTGCTTGCGGGATGTACAGACAACGAATC
AGCTTCATCAGGCAGCTCTAGCGAGTCGAAAGATGGAAAAGTTACTATTACAACCGTGCGTACGCTAAAAGATGATACAA
AATTTCGTGATGGGGAAGATCTTAATAATAACCCGATTACACGGTGGTCGGAAAAAGAGTTAGGGATTACATGGAAAACA
TTGTGGACAGCCCCGAATGACGAGCAATATCATAATAAGATTCGTCTCTCCTTATCATCCGGCCAAAAGTTACCTGATGT
ATTCAAAGTGTCCGACGGACAATTAATTAGCGATTTAATTCGTTCCGGGAAAGTGATGCCTGTGGATGAGGCAATTGAAA
AATACGCATCTCCGAGATTGAAGAAAATTTTTAATCAGTTCCCGGAGGCGTTCTATCCGGCTACGGTTGATGGAAAACGC
TATGGGATTCCGCGTTTTTCTGGTGGTAATGGTTCGGACTCGTTACTTTGGATTCGAAAAGATTGGCTCGATAAGTTAGG
ACTCCAGCCACCAAAAACGATCGAAGATCTTGAAAAAATTATGGATGCGTTTGTCAACAAAGATCCGGATGGAAACGGAA
AAAAGGATACGATCGGCTTAACGCTAGCCAGCAAAAATGGCTTGGCGACATGGCTTGCTGATGGCAGCTTTATTTTCGGC
GCTTACGGCAATTATGTGCCCGGTTCATGGTCAAAAGGAGAAGATGGTTCTTTGGTCTATGGTTCCGTTCAACCGTCTAT
GAAAAAGGCTCTGGAAAAATTGAATGAATGGTATAAAAAGGGATATTTAGATAAAGAAGTAGGTATTTTAGATGAACAAA
CGGCAATTGAAAGCTTTGTTTCCGGGAAGTCTGGGATTATTTCCGCCCCGCCTTGGGCAGCTGACTGGCCGATCACAGAT
GCATTGAAAAATAATCCAGGGGCTGTAGTTGAGCCGTATCCGCTACCAAGCGGCCCAGACGGCAAAATTGGGCGGCGCGG
TGAGGGACTTGTTACAGGGATGTTCCTGTTCAGTAAAGACTTTAAACATATGGACAAGTTCTTTGAATACTTAGATGAGG
CCTTTGCCTACGTGTATAACGATTCTAAATACTTCAAATATGGATTAGCCGAAGGCTATGACTATGTAATGAAGGACGGC
AAGCCTGTTTATGATGATAAGGAAATCCCAAACGGGAGACTGGATCCAGGTGCATATTTTATCACAGAAGCAATTCCAAC
GGTTCCATACATGCTTTATGATCTAGTTGAAGAATTGTATACAACAAAACGCGAGCCTAAAAACGCCTATGAGTACACAA
GAATCGTCTCCTTAGGTGATTCTTTTATGAAGGCAGCAACAATTGTTAATCAGCAAAACCAATACCGCATCGAAAATGAA
TTTACTGGACCGCCGACAAAAACAATGCAAAAACGCTTTGAATTCCTAACGAAAATGGAGCGTGAGACGTTTGCCAACAT
TATTTATGGCCGGGCTCCTCTCAGTGCATTTGATGATTTCGTGAAAAAGTGGGAAGAATCTGGCGGTAAAGAGATTACAA
AAGAAGTGAACGAATGGTATCAATCAGTGAAAGGAGAAAAGTAA

Upstream 100 bases:

>100_bases
GCTTGAAAGGGGGGATTTATTTAGAGAGAGACCGATATCGTTTTTCTTTATGGTGGTTGCGAGTAAGGGGGATTTAGAAA
ACGGGATTGGAGGGAGAAAG

Downstream 100 bases:

>100_bases
AAGAGCATGGTATAGCGGTGCGGACATGGTTGCATAATCCATTATGACAATCGGTGTCTGCACCTATCTTTTCTTAATAT
GGGTATGCTTGGGAAAAGCG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: Lipoprotein lplA [H]

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MLKKVFTTLTVTVLTAGVLAGCTDNESASSGSSSESKDGKVTITTVRTLKDDTKFRDGEDLNNNPITRWSEKELGITWKT
LWTAPNDEQYHNKIRLSLSSGQKLPDVFKVSDGQLISDLIRSGKVMPVDEAIEKYASPRLKKIFNQFPEAFYPATVDGKR
YGIPRFSGGNGSDSLLWIRKDWLDKLGLQPPKTIEDLEKIMDAFVNKDPDGNGKKDTIGLTLASKNGLATWLADGSFIFG
AYGNYVPGSWSKGEDGSLVYGSVQPSMKKALEKLNEWYKKGYLDKEVGILDEQTAIESFVSGKSGIISAPPWAADWPITD
ALKNNPGAVVEPYPLPSGPDGKIGRRGEGLVTGMFLFSKDFKHMDKFFEYLDEAFAYVYNDSKYFKYGLAEGYDYVMKDG
KPVYDDKEIPNGRLDPGAYFITEAIPTVPYMLYDLVEELYTTKREPKNAYEYTRIVSLGDSFMKAATIVNQQNQYRIENE
FTGPPTKTMQKRFEFLTKMERETFANIIYGRAPLSAFDDFVKKWEESGGKEITKEVNEWYQSVKGEK

Sequences:

>Translated_547_residues
MLKKVFTTLTVTVLTAGVLAGCTDNESASSGSSSESKDGKVTITTVRTLKDDTKFRDGEDLNNNPITRWSEKELGITWKT
LWTAPNDEQYHNKIRLSLSSGQKLPDVFKVSDGQLISDLIRSGKVMPVDEAIEKYASPRLKKIFNQFPEAFYPATVDGKR
YGIPRFSGGNGSDSLLWIRKDWLDKLGLQPPKTIEDLEKIMDAFVNKDPDGNGKKDTIGLTLASKNGLATWLADGSFIFG
AYGNYVPGSWSKGEDGSLVYGSVQPSMKKALEKLNEWYKKGYLDKEVGILDEQTAIESFVSGKSGIISAPPWAADWPITD
ALKNNPGAVVEPYPLPSGPDGKIGRRGEGLVTGMFLFSKDFKHMDKFFEYLDEAFAYVYNDSKYFKYGLAEGYDYVMKDG
KPVYDDKEIPNGRLDPGAYFITEAIPTVPYMLYDLVEELYTTKREPKNAYEYTRIVSLGDSFMKAATIVNQQNQYRIENE
FTGPPTKTMQKRFEFLTKMERETFANIIYGRAPLSAFDDFVKKWEESGGKEITKEVNEWYQSVKGEK
>Mature_547_residues
MLKKVFTTLTVTVLTAGVLAGCTDNESASSGSSSESKDGKVTITTVRTLKDDTKFRDGEDLNNNPITRWSEKELGITWKT
LWTAPNDEQYHNKIRLSLSSGQKLPDVFKVSDGQLISDLIRSGKVMPVDEAIEKYASPRLKKIFNQFPEAFYPATVDGKR
YGIPRFSGGNGSDSLLWIRKDWLDKLGLQPPKTIEDLEKIMDAFVNKDPDGNGKKDTIGLTLASKNGLATWLADGSFIFG
AYGNYVPGSWSKGEDGSLVYGSVQPSMKKALEKLNEWYKKGYLDKEVGILDEQTAIESFVSGKSGIISAPPWAADWPITD
ALKNNPGAVVEPYPLPSGPDGKIGRRGEGLVTGMFLFSKDFKHMDKFFEYLDEAFAYVYNDSKYFKYGLAEGYDYVMKDG
KPVYDDKEIPNGRLDPGAYFITEAIPTVPYMLYDLVEELYTTKREPKNAYEYTRIVSLGDSFMKAATIVNQQNQYRIENE
FTGPPTKTMQKRFEFLTKMERETFANIIYGRAPLSAFDDFVKKWEESGGKEITKEVNEWYQSVKGEK

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 61464; Mature: 61464

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKVFTTLTVTVLTAGVLAGCTDNESASSGSSSESKDGKVTITTVRTLKDDTKFRDGED
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCCC
LNNNPITRWSEKELGITWKTLWTAPNDEQYHNKIRLSLSSGQKLPDVFKVSDGQLISDLI
CCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCEEEEEECCCCCCCHHHCCCCCHHHHHHH
RSGKVMPVDEAIEKYASPRLKKIFNQFPEAFYPATVDGKRYGIPRFSGGNGSDSLLWIRK
HCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHH
DWLDKLGLQPPKTIEDLEKIMDAFVNKDPDGNGKKDTIGLTLASKNGLATWLADGSFIFG
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEEE
AYGNYVPGSWSKGEDGSLVYGSVQPSMKKALEKLNEWYKKGYLDKEVGILDEQTAIESFV
CCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
SGKSGIISAPPWAADWPITDALKNNPGAVVEPYPLPSGPDGKIGRRGEGLVTGMFLFSKD
CCCCCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
FKHMDKFFEYLDEAFAYVYNDSKYFKYGLAEGYDYVMKDGKPVYDDKEIPNGRLDPGAYF
HHHHHHHHHHHHHHHHHHCCCCHHEEHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHH
ITEAIPTVPYMLYDLVEELYTTKREPKNAYEYTRIVSLGDSFMKAATIVNQQNQYRIENE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
FTGPPTKTMQKRFEFLTKMERETFANIIYGRAPLSAFDDFVKKWEESGGKEITKEVNEWY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
QSVKGEK
HHHCCCC
>Mature Secondary Structure
MLKKVFTTLTVTVLTAGVLAGCTDNESASSGSSSESKDGKVTITTVRTLKDDTKFRDGED
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCCC
LNNNPITRWSEKELGITWKTLWTAPNDEQYHNKIRLSLSSGQKLPDVFKVSDGQLISDLI
CCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCEEEEEECCCCCCCHHHCCCCCHHHHHHH
RSGKVMPVDEAIEKYASPRLKKIFNQFPEAFYPATVDGKRYGIPRFSGGNGSDSLLWIRK
HCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHH
DWLDKLGLQPPKTIEDLEKIMDAFVNKDPDGNGKKDTIGLTLASKNGLATWLADGSFIFG
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEEE
AYGNYVPGSWSKGEDGSLVYGSVQPSMKKALEKLNEWYKKGYLDKEVGILDEQTAIESFV
CCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
SGKSGIISAPPWAADWPITDALKNNPGAVVEPYPLPSGPDGKIGRRGEGLVTGMFLFSKD
CCCCCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
FKHMDKFFEYLDEAFAYVYNDSKYFKYGLAEGYDYVMKDGKPVYDDKEIPNGRLDPGAYF
HHHHHHHHHHHHHHHHHHCCCCHHEEHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHH
ITEAIPTVPYMLYDLVEELYTTKREPKNAYEYTRIVSLGDSFMKAATIVNQQNQYRIENE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
FTGPPTKTMQKRFEFLTKMERETFANIIYGRAPLSAFDDFVKKWEESGGKEITKEVNEWY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
QSVKGEK
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7921237; 9384377 [H]