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The map label for this gene is yugU [H]

Identifier: 138895380

GI number: 138895380

Start: 1823673

End: 1824074

Strand: Reverse

Name: yugU [H]

Synonym: GTNG_1724

Alternate gene names: 138895380

Gene position: 1824074-1823673 (Counterclockwise)

Preceding gene: 138895382

Following gene: 138895377

Centisome position: 51.38

GC content: 52.74

Gene sequence:

>402_bases
ATGCTTCGTTCCTTTACGATCCGCACGGCGAAGCGGGATGAAATGATTGATATTACCTCATTTGTCGAGGAGACGGTGCG
CCTGTCTAAGGTAGAAGAGGGGATGGCTGTCGTCTATTGTCCGCACACGACGGCAGGAATCACGATTAATGAAAACGCGG
ACCCCGATGTTAAACGCGACATGATGCGCCGTTTTGATGAAACGTATCCGTGGGAGCACCCACTTGACCGTCATATGGAA
GGGAACACAGCCGCTCATATGAAAGCAAGCACCGTCGGAGCGTCGCAGCACGTCATTATTCACGAAGGTCGGCTGCTGCT
TGGGCGCTGGCAAGGCATTTATTTTTGCGAGTATGACGGACCACGTCAGCGCACCGTTTACATCAAAGTGCTCGAGGGAT
AG

Upstream 100 bases:

>100_bases
CGTTTCGGCATCGTTTTTCTCTCCTTGCTCGTTTTGCGCTATAATTAGAGTAGCAAACATTTCTTTCCGGTACAAAATCT
TTGTTCAGGTGGTGGAATCG

Downstream 100 bases:

>100_bases
ATAACCATAATTATATTATGTAAACTTAATTAAAAATCACCGCATAACAGAAATCATCAGAAGAGGATGAAAAACCCGGG
TGAACGTCTCCCGGGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLRSFTIRTAKRDEMIDITSFVEETVRLSKVEEGMAVVYCPHTTAGITINENADPDVKRDMMRRFDETYPWEHPLDRHME
GNTAAHMKASTVGASQHVIIHEGRLLLGRWQGIYFCEYDGPRQRTVYIKVLEG

Sequences:

>Translated_133_residues
MLRSFTIRTAKRDEMIDITSFVEETVRLSKVEEGMAVVYCPHTTAGITINENADPDVKRDMMRRFDETYPWEHPLDRHME
GNTAAHMKASTVGASQHVIIHEGRLLLGRWQGIYFCEYDGPRQRTVYIKVLEG
>Mature_133_residues
MLRSFTIRTAKRDEMIDITSFVEETVRLSKVEEGMAVVYCPHTTAGITINENADPDVKRDMMRRFDETYPWEHPLDRHME
GNTAAHMKASTVGASQHVIIHEGRLLLGRWQGIYFCEYDGPRQRTVYIKVLEG

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=118, Percent_Identity=30.5084745762712, Blast_Score=69, Evalue=9e-14,
Organism=Drosophila melanogaster, GI221476589, Length=118, Percent_Identity=30.5084745762712, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221476594, Length=118, Percent_Identity=30.5084745762712, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15372; Mature: 15372

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSFTIRTAKRDEMIDITSFVEETVRLSKVEEGMAVVYCPHTTAGITINENADPDVKRD
CCCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCHHHHH
MMRRFDETYPWEHPLDRHMEGNTAAHMKASTVGASQHVIIHEGRLLLGRWQGIYFCEYDG
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCEEEEEECCEEEEEECCC
PRQRTVYIKVLEG
CCCEEEEEEEECC
>Mature Secondary Structure
MLRSFTIRTAKRDEMIDITSFVEETVRLSKVEEGMAVVYCPHTTAGITINENADPDVKRD
CCCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCHHHHH
MMRRFDETYPWEHPLDRHMEGNTAAHMKASTVGASQHVIIHEGRLLLGRWQGIYFCEYDG
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCEEEEEECCEEEEEECCC
PRQRTVYIKVLEG
CCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]