Click here to switch to the map view.

The map label for this gene is cbiP [H]

Identifier: 138895340

GI number: 138895340

Start: 1773683

End: 1775185

Strand: Reverse

Name: cbiP [H]

Synonym: GTNG_1684

Alternate gene names: 138895340

Gene position: 1775185-1773683 (Counterclockwise)

Preceding gene: 138895341

Following gene: 138895339

Centisome position: 50.0

GC content: 56.49

Gene sequence:

>1503_bases
ATGGCTAAGACGCTGCCGATTATGTTTCAAGGCACCCATTCTGATGCCGGCAAAAGCGTCATCGCCACCGCGTTTTGCCG
CATGTTCGCCCAAGACGGCTGGAAGACGGCGCCGTTCAAGTCGCAAAACATGTCGTTAAACTCCTACGTGACGCCGGACG
GAAACGAAATCGGGCGGGCGCAAGGAATTCAGGCCGAAGCGGCCGGAGTGGCGGCGCGCGCTGAGATGAATCCGATTTTG
ATTAAGCCAAGCCGCGAGCATGAATCGCAAATCGTTGTGCTTGGCAAACCGTACGGCAATATGCAGGCGTTCGCTTACCG
GAACGAGTTTTTCCACCAAGGGCTGGCCGTCATCCGTCAGTCGCTCGAAACGTTGATGAACGAGTATGACCGGATTGTCA
TTGAAGGAGCGGGAAGCCCGGCGGAAGTAAACTTAAACGACCGCGAGTTGGTCAACATGCGTGTCGCCCGTCTCGCCAAC
GCCCCGGTCGTGTTGATCGGCGATATTGAGCGGGGCGGGGTGTTCGCGAGCCTCGTCGGGACGTTGGCGCTTTTAGAACC
TGAAGACCGCAAACGGGTAGTCGGCGTTATCATTAACAAGTTTCGTGGTGATGCGGCGTTGCTTAAACCGGGGCTTGACT
GGTTTGAACAATATACGGGCGTGCCAGTGCTTGGCGTCGTCCCGCATTTGCCCGATTTGGCGATCGATGCCGAAGATTCA
TTGGCACTGGAACGGTTCGCCGCGTCGTCCGATGACAAGGGAGCAATTGACATTGCCGTCATCCGTTGTCCGAAAATCGC
CAACTTCACCGATATCGATCCGCTGTTGACTGAACCGGACTGCCGCGTCCGGTTAGTCACGCACGCCGGGGAGCTCGGCG
AACCGGATGTGATCGTGTTGCCAGGAAGTAAAAATACGATTGAAGATTTGATGTATATGAAAAAACGGGGCCTTGCTTCC
CGCATCGTGTCACTTGTCAATGAAGGAAAAACAACGGTTGTCGGCTTATGTGGCGGCTATCAAATGCTTGGCGATGTCAT
CCGCGATCCGCACGGGGTCGAGACGCCATTTCCGGAAGTGAAAGGGCTCGGGCTGTTGCCGGTTGCGACGACGCTTGAGC
GGACGAAAACAACCGTCCGCTCTGAAGGAATGCTCACGTGGGCCGGGGAACGGTTTAGCGTGCGAGGGTATGAAATTCAT
ATGGGTCGCTCGACGCCGCTTCCCGGTTATGTGCCGCTCATTGAGATCGGCGGCCGCGGCGAAGGCGCGAAGCGGGAGGA
TGGACGTGTGCTCGGCACATATATGCACGATTTGTTCCATAACGACGCGTTTCGCACCGCCTTTTTCAACGTCATTCGCC
GCGAAAAAGGACTCGCCAGTTCCGCCGTCAGGCCGTTTCATTCGCTCAAAGAGGCGGCGTTTGACCGGCTTGCCGCCCAT
GTTCGGCAACATGTGGCCGTTGAACGCATCGAGCAGATGATGCGTCAATTTCAGCAACGATGA

Upstream 100 bases:

>100_bases
TTGGCGCACCGGCTTGTCGCCGGCTATGTCCATTTTCATTTCGCGTCCGCCCCGGCGATGGTTGAGCGGTGGCTCGCCGA
ATGCGAGAAGGTGACCATCA

Downstream 100 bases:

>100_bases
GCGGACAAATTTCCCCATTGACCATTTTTCACCGGTAGTTGGTGAAAGAACAAGTTAGTGACTCGAGCTCCGATGCAAGT
AAATAGACTGTTCCTAGCTG

Product: cobyric acid synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MAKTLPIMFQGTHSDAGKSVIATAFCRMFAQDGWKTAPFKSQNMSLNSYVTPDGNEIGRAQGIQAEAAGVAARAEMNPIL
IKPSREHESQIVVLGKPYGNMQAFAYRNEFFHQGLAVIRQSLETLMNEYDRIVIEGAGSPAEVNLNDRELVNMRVARLAN
APVVLIGDIERGGVFASLVGTLALLEPEDRKRVVGVIINKFRGDAALLKPGLDWFEQYTGVPVLGVVPHLPDLAIDAEDS
LALERFAASSDDKGAIDIAVIRCPKIANFTDIDPLLTEPDCRVRLVTHAGELGEPDVIVLPGSKNTIEDLMYMKKRGLAS
RIVSLVNEGKTTVVGLCGGYQMLGDVIRDPHGVETPFPEVKGLGLLPVATTLERTKTTVRSEGMLTWAGERFSVRGYEIH
MGRSTPLPGYVPLIEIGGRGEGAKREDGRVLGTYMHDLFHNDAFRTAFFNVIRREKGLASSAVRPFHSLKEAAFDRLAAH
VRQHVAVERIEQMMRQFQQR

Sequences:

>Translated_500_residues
MAKTLPIMFQGTHSDAGKSVIATAFCRMFAQDGWKTAPFKSQNMSLNSYVTPDGNEIGRAQGIQAEAAGVAARAEMNPIL
IKPSREHESQIVVLGKPYGNMQAFAYRNEFFHQGLAVIRQSLETLMNEYDRIVIEGAGSPAEVNLNDRELVNMRVARLAN
APVVLIGDIERGGVFASLVGTLALLEPEDRKRVVGVIINKFRGDAALLKPGLDWFEQYTGVPVLGVVPHLPDLAIDAEDS
LALERFAASSDDKGAIDIAVIRCPKIANFTDIDPLLTEPDCRVRLVTHAGELGEPDVIVLPGSKNTIEDLMYMKKRGLAS
RIVSLVNEGKTTVVGLCGGYQMLGDVIRDPHGVETPFPEVKGLGLLPVATTLERTKTTVRSEGMLTWAGERFSVRGYEIH
MGRSTPLPGYVPLIEIGGRGEGAKREDGRVLGTYMHDLFHNDAFRTAFFNVIRREKGLASSAVRPFHSLKEAAFDRLAAH
VRQHVAVERIEQMMRQFQQR
>Mature_499_residues
AKTLPIMFQGTHSDAGKSVIATAFCRMFAQDGWKTAPFKSQNMSLNSYVTPDGNEIGRAQGIQAEAAGVAARAEMNPILI
KPSREHESQIVVLGKPYGNMQAFAYRNEFFHQGLAVIRQSLETLMNEYDRIVIEGAGSPAEVNLNDRELVNMRVARLANA
PVVLIGDIERGGVFASLVGTLALLEPEDRKRVVGVIINKFRGDAALLKPGLDWFEQYTGVPVLGVVPHLPDLAIDAEDSL
ALERFAASSDDKGAIDIAVIRCPKIANFTDIDPLLTEPDCRVRLVTHAGELGEPDVIVLPGSKNTIEDLMYMKKRGLASR
IVSLVNEGKTTVVGLCGGYQMLGDVIRDPHGVETPFPEVKGLGLLPVATTLERTKTTVRSEGMLTWAGERFSVRGYEIHM
GRSTPLPGYVPLIEIGGRGEGAKREDGRVLGTYMHDLFHNDAFRTAFFNVIRREKGLASSAVRPFHSLKEAAFDRLAAHV
RQHVAVERIEQMMRQFQQR

Specific function: Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation [H]

COG id: COG1492

COG function: function code H; Cobyric acid synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GATase cobBQ-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR017929
- InterPro:   IPR004459
- InterPro:   IPR011698 [H]

Pfam domain/function: PF01656 CbiA; PF07685 GATase_3 [H]

EC number: NA

Molecular weight: Translated: 54926; Mature: 54795

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTLPIMFQGTHSDAGKSVIATAFCRMFAQDGWKTAPFKSQNMSLNSYVTPDGNEIGRA
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCHH
QGIQAEAAGVAARAEMNPILIKPSREHESQIVVLGKPYGNMQAFAYRNEFFHQGLAVIRQ
CCCCHHHHCEEECCCCCCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
SLETLMNEYDRIVIEGAGSPAEVNLNDRELVNMRVARLANAPVVLIGDIERGGVFASLVG
HHHHHHHHCCEEEEECCCCCCEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
TLALLEPEDRKRVVGVIINKFRGDAALLKPGLDWFEQYTGVPVLGVVPHLPDLAIDAEDS
HHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHCCCCEEHHCCCCCCCEECCCHH
LALERFAASSDDKGAIDIAVIRCPKIANFTDIDPLLTEPDCRVRLVTHAGELGEPDVIVL
HHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEE
PGSKNTIEDLMYMKKRGLASRIVSLVNEGKTTVVGLCGGYQMLGDVIRDPHGVETPFPEV
CCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCC
KGLGLLPVATTLERTKTTVRSEGMLTWAGERFSVRGYEIHMGRSTPLPGYVPLIEIGGRG
CCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEEEECCCCCCCCCEEEEEECCCC
EGAKREDGRVLGTYMHDLFHNDAFRTAFFNVIRREKGLASSAVRPFHSLKEAAFDRLAAH
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VRQHVAVERIEQMMRQFQQR
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKTLPIMFQGTHSDAGKSVIATAFCRMFAQDGWKTAPFKSQNMSLNSYVTPDGNEIGRA
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCHH
QGIQAEAAGVAARAEMNPILIKPSREHESQIVVLGKPYGNMQAFAYRNEFFHQGLAVIRQ
CCCCHHHHCEEECCCCCCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
SLETLMNEYDRIVIEGAGSPAEVNLNDRELVNMRVARLANAPVVLIGDIERGGVFASLVG
HHHHHHHHCCEEEEECCCCCCEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
TLALLEPEDRKRVVGVIINKFRGDAALLKPGLDWFEQYTGVPVLGVVPHLPDLAIDAEDS
HHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHCCCCEEHHCCCCCCCEECCCHH
LALERFAASSDDKGAIDIAVIRCPKIANFTDIDPLLTEPDCRVRLVTHAGELGEPDVIVL
HHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEE
PGSKNTIEDLMYMKKRGLASRIVSLVNEGKTTVVGLCGGYQMLGDVIRDPHGVETPFPEV
CCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCC
KGLGLLPVATTLERTKTTVRSEGMLTWAGERFSVRGYEIHMGRSTPLPGYVPLIEIGGRG
CCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEEEECCCCCCCCCEEEEEECCCC
EGAKREDGRVLGTYMHDLFHNDAFRTAFFNVIRREKGLASSAVRPFHSLKEAAFDRLAAH
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VRQHVAVERIEQMMRQFQQR
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA