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The map label for this gene is ypvA [H]

Identifier: 138895054

GI number: 138895054

Start: 1481856

End: 1483793

Strand: Direct

Name: ypvA [H]

Synonym: GTNG_1392

Alternate gene names: 138895054

Gene position: 1481856-1483793 (Clockwise)

Preceding gene: 138895053

Following gene: 138895055

Centisome position: 41.74

GC content: 49.38

Gene sequence:

>1938_bases
ATGAGCCATAAACGTTATCCGTTTCTGTTAGAAAAAAACGAAAACTTTTTTGATAAGCTCAGCCAGTGGATCGGTGATGT
CTTTTACGATACGTTGCCGGAGGCCGGCTTTGAGCTGCGCGATGAGCAAGTTTATATGGCGTTCCAGCTCGAGCGCGCAT
TTCGCGAAAAAAAGGTGATGTTTGCCGAAGCCGGAGTCGGTACAGGGAAGACGATCGTCTACTTGCTATACGCGATTTGT
TACGCACGTTATACCGGCAAGCCGGCCATCATCGCCTGTGCAGATGAAACGCTTATTGAGCAGCTCGTCAAAAAAGAAGG
AGATATCGCCAAATTGTCCAATGTGCTCGGGCTGCATATTGATGTCCGACTGGCGAAATCACCCGATCAATATTTATGTT
TAAACAAGCTTGAAGAAGTGACGACATACGACGATGGCGATATTGAGCTATATGAACAAATTTATGACAATCTGCCGGCT
TTCGTCCATGACAATAAAACGATGCAGTCGTTTTATCGTTACGGCGACCGGAAAGAATACGCCCATTTAACCGATGAGCA
ATGGAAAAAAATCGCCTGGGATCCGTTTCAAGATTGTTTTACGTGTGAAAAGCGGCACCGTTGCGGTCAGACGCTTTGGC
GCGACTATTACCGGAAAGCGGCCGATTTGATCGTCTGTTCACACGACTTTTATATGGAGCATGTGTGGACGTACGAGGCG
CGCAAGCGGGAAGGACAACTGCCGCTCTTGCCGGAGGCGAGCTGCGTCGTGTTCGACGAAGGACACTTGCTTGAGTTTGC
CGCACAAAAGGCGCTTACATACCGAATGAAAGAGACGACGCTTGAGATGTTGCTGACGCGGCTTCTTGAAAACGATATTC
GCGAAGAACTCGCCTATTTAATTGAAGAAACCATCGAAACGAGTGGGCGCTTTTTTACCGAATTGAAAGCGTGCGCGAAA
GACATCCCTGGCTCAAACCGGAAAGAAATTTCACCGTCGCCGCAGCCCGAGCGCTGGGCGAAGCGGCTGCGTGACCAAAT
CGTTAGAATCGGCAATGAGCTCGTGTTTGAAAGTGAAACGTATACGATTGACCATTATCAGCTGAATATTGTTGACGAAT
ACTTAGACCAAATTCACTATTTGCTCGACTTGTTTTTAACAAGCGCTGATGCCATCGCGTGGCTCGAGTCGTCGCGCCAA
GAGGCCACACTTGTTGTCATGCCGCACACTGTGCAAGAAGTACTGCGTGAAAAAGTGTTTGCGAAACGCATGCCGTTTAT
CTTCTCATCGGCGACGTTATCGAACGGCAAGTCATTTCAATATATGGCTGACAGCTTAGGGATCGATGACTATTTATCGT
TCAGTGTGCCGTCGCCATTTGATTATGACGAGCAAATGACCATTTATATGCCGACGTTCCGCGCTAATGAGGCGCTGTTT
GCTGAAAAATACGCCTATGCGATGAAGAAATTGCGTGAAACGGGCGGACGGGCGCTCATCTTGTTTCCAACGCGCGAGGA
GCTGCTTCAGTTTAAAGAAGCGGCGGCCGGGGAACCGTTCTCATTTTTGTTTGAAGGCGACCGCGAGATTAGCGATTTAG
TCGCCGAGTTCCAACGCAACGAAGAAACCGTGCTTTGTTCGGAACATTTATGGGAAGGGCTTGACATTCCGGGATCGTCG
CTGTCCAATGTTATCATTTGGTCACTGCCATATCCGCCAAACGATCCAGTGTTTCAGGCGAAGCGGAAGGCATATAGCGA
TCCGTTTTGGGATGTCGATGTCCCGTATATGCTTCTCCGTCTCCGCCAAGGGGTCGGACGGCTCATCCGCACGCGCGATG
ATCGCGGCATCGTCTCCATTTTTGTTACCGACCAGGAAGACAAGCAGGTCATCGCTGCGATCAAATCGGTCTTGCCAACA
TCTGTGAGGGAAGAGTAG

Upstream 100 bases:

>100_bases
ATATAATCTTGTTACTAGAATTAAGGCGCGCAACGATGTGGTTGCGCGCTTATGCATGATGATGCCGGGGGACTTTATGT
CAATTGGAGGGGTGGCGGTG

Downstream 100 bases:

>100_bases
CGCTCTTCCCTCTTTTCTTTTGGTGAAAAATGACGTTTCTTCGCGATCAAGGAGGAAAAGAGCACCTAGTTATGGAAATG
ATGATACGGCCATCCAAAAC

Product: ATP-dependent helicase DinG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 644

Protein sequence:

>645_residues
MSHKRYPFLLEKNENFFDKLSQWIGDVFYDTLPEAGFELRDEQVYMAFQLERAFREKKVMFAEAGVGTGKTIVYLLYAIC
YARYTGKPAIIACADETLIEQLVKKEGDIAKLSNVLGLHIDVRLAKSPDQYLCLNKLEEVTTYDDGDIELYEQIYDNLPA
FVHDNKTMQSFYRYGDRKEYAHLTDEQWKKIAWDPFQDCFTCEKRHRCGQTLWRDYYRKAADLIVCSHDFYMEHVWTYEA
RKREGQLPLLPEASCVVFDEGHLLEFAAQKALTYRMKETTLEMLLTRLLENDIREELAYLIEETIETSGRFFTELKACAK
DIPGSNRKEISPSPQPERWAKRLRDQIVRIGNELVFESETYTIDHYQLNIVDEYLDQIHYLLDLFLTSADAIAWLESSRQ
EATLVVMPHTVQEVLREKVFAKRMPFIFSSATLSNGKSFQYMADSLGIDDYLSFSVPSPFDYDEQMTIYMPTFRANEALF
AEKYAYAMKKLRETGGRALILFPTREELLQFKEAAAGEPFSFLFEGDREISDLVAEFQRNEETVLCSEHLWEGLDIPGSS
LSNVIIWSLPYPPNDPVFQAKRKAYSDPFWDVDVPYMLLRLRQGVGRLIRTRDDRGIVSIFVTDQEDKQVIAAIKSVLPT
SVREE

Sequences:

>Translated_645_residues
MSHKRYPFLLEKNENFFDKLSQWIGDVFYDTLPEAGFELRDEQVYMAFQLERAFREKKVMFAEAGVGTGKTIVYLLYAIC
YARYTGKPAIIACADETLIEQLVKKEGDIAKLSNVLGLHIDVRLAKSPDQYLCLNKLEEVTTYDDGDIELYEQIYDNLPA
FVHDNKTMQSFYRYGDRKEYAHLTDEQWKKIAWDPFQDCFTCEKRHRCGQTLWRDYYRKAADLIVCSHDFYMEHVWTYEA
RKREGQLPLLPEASCVVFDEGHLLEFAAQKALTYRMKETTLEMLLTRLLENDIREELAYLIEETIETSGRFFTELKACAK
DIPGSNRKEISPSPQPERWAKRLRDQIVRIGNELVFESETYTIDHYQLNIVDEYLDQIHYLLDLFLTSADAIAWLESSRQ
EATLVVMPHTVQEVLREKVFAKRMPFIFSSATLSNGKSFQYMADSLGIDDYLSFSVPSPFDYDEQMTIYMPTFRANEALF
AEKYAYAMKKLRETGGRALILFPTREELLQFKEAAAGEPFSFLFEGDREISDLVAEFQRNEETVLCSEHLWEGLDIPGSS
LSNVIIWSLPYPPNDPVFQAKRKAYSDPFWDVDVPYMLLRLRQGVGRLIRTRDDRGIVSIFVTDQEDKQVIAAIKSVLPT
SVREE
>Mature_644_residues
SHKRYPFLLEKNENFFDKLSQWIGDVFYDTLPEAGFELRDEQVYMAFQLERAFREKKVMFAEAGVGTGKTIVYLLYAICY
ARYTGKPAIIACADETLIEQLVKKEGDIAKLSNVLGLHIDVRLAKSPDQYLCLNKLEEVTTYDDGDIELYEQIYDNLPAF
VHDNKTMQSFYRYGDRKEYAHLTDEQWKKIAWDPFQDCFTCEKRHRCGQTLWRDYYRKAADLIVCSHDFYMEHVWTYEAR
KREGQLPLLPEASCVVFDEGHLLEFAAQKALTYRMKETTLEMLLTRLLENDIREELAYLIEETIETSGRFFTELKACAKD
IPGSNRKEISPSPQPERWAKRLRDQIVRIGNELVFESETYTIDHYQLNIVDEYLDQIHYLLDLFLTSADAIAWLESSRQE
ATLVVMPHTVQEVLREKVFAKRMPFIFSSATLSNGKSFQYMADSLGIDDYLSFSVPSPFDYDEQMTIYMPTFRANEALFA
EKYAYAMKKLRETGGRALILFPTREELLQFKEAAAGEPFSFLFEGDREISDLVAEFQRNEETVLCSEHLWEGLDIPGSSL
SNVIIWSLPYPPNDPVFQAKRKAYSDPFWDVDVPYMLLRLRQGVGRLIRTRDDRGIVSIFVTDQEDKQVIAAIKSVLPTS
VREE

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=618, Percent_Identity=25.8899676375405, Blast_Score=164, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014013
- InterPro:   IPR006555 [H]

Pfam domain/function: NA

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 75076; Mature: 74945

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHKRYPFLLEKNENFFDKLSQWIGDVFYDTLPEAGFELRDEQVYMAFQLERAFREKKVM
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEE
FAEAGVGTGKTIVYLLYAICYARYTGKPAIIACADETLIEQLVKKEGDIAKLSNVLGLHI
EEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHEEEE
DVRLAKSPDQYLCLNKLEEVTTYDDGDIELYEQIYDNLPAFVHDNKTMQSFYRYGDRKEY
EEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHCCCCHHH
AHLTDEQWKKIAWDPFQDCFTCEKRHRCGQTLWRDYYRKAADLIVCSHDFYMEHVWTYEA
HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHH
RKREGQLPLLPEASCVVFDEGHLLEFAAQKALTYRMKETTLEMLLTRLLENDIREELAYL
HHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEETIETSGRFFTELKACAKDIPGSNRKEISPSPQPERWAKRLRDQIVRIGNELVFESET
HHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEECCCE
YTIDHYQLNIVDEYLDQIHYLLDLFLTSADAIAWLESSRQEATLVVMPHTVQEVLREKVF
EEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHH
AKRMPFIFSSATLSNGKSFQYMADSLGIDDYLSFSVPSPFDYDEQMTIYMPTFRANEALF
HHHCCCCEECCCCCCCCCHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCHHHH
AEKYAYAMKKLRETGGRALILFPTREELLQFKEAAAGEPFSFLFEGDREISDLVAEFQRN
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC
EETVLCSEHLWEGLDIPGSSLSNVIIWSLPYPPNDPVFQAKRKAYSDPFWDVDVPYMLLR
CCEEEEHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
LRQGVGRLIRTRDDRGIVSIFVTDQEDKQVIAAIKSVLPTSVREE
HHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SHKRYPFLLEKNENFFDKLSQWIGDVFYDTLPEAGFELRDEQVYMAFQLERAFREKKVM
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEE
FAEAGVGTGKTIVYLLYAICYARYTGKPAIIACADETLIEQLVKKEGDIAKLSNVLGLHI
EEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHEEEE
DVRLAKSPDQYLCLNKLEEVTTYDDGDIELYEQIYDNLPAFVHDNKTMQSFYRYGDRKEY
EEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHCCCCHHH
AHLTDEQWKKIAWDPFQDCFTCEKRHRCGQTLWRDYYRKAADLIVCSHDFYMEHVWTYEA
HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHH
RKREGQLPLLPEASCVVFDEGHLLEFAAQKALTYRMKETTLEMLLTRLLENDIREELAYL
HHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEETIETSGRFFTELKACAKDIPGSNRKEISPSPQPERWAKRLRDQIVRIGNELVFESET
HHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEECCCE
YTIDHYQLNIVDEYLDQIHYLLDLFLTSADAIAWLESSRQEATLVVMPHTVQEVLREKVF
EEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHH
AKRMPFIFSSATLSNGKSFQYMADSLGIDDYLSFSVPSPFDYDEQMTIYMPTFRANEALF
HHHCCCCEECCCCCCCCCHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCHHHH
AEKYAYAMKKLRETGGRALILFPTREELLQFKEAAAGEPFSFLFEGDREISDLVAEFQRN
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC
EETVLCSEHLWEGLDIPGSSLSNVIIWSLPYPPNDPVFQAKRKAYSDPFWDVDVPYMLLR
CCEEEEHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
LRQGVGRLIRTRDDRGIVSIFVTDQEDKQVIAAIKSVLPTSVREE
HHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]