| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138895038
Identifier: 138895038
GI number: 138895038
Start: 1460881
End: 1461681
Strand: Reverse
Name: 138895038
Synonym: GTNG_1376
Alternate gene names: NA
Gene position: 1461681-1460881 (Counterclockwise)
Preceding gene: 138895039
Following gene: 138895034
Centisome position: 41.17
GC content: 49.44
Gene sequence:
>801_bases ATGAATGTCTCCTTATACAAACAAATGCTCAAAGCACAGACAAAAACGATCATTGGCTATTCGACCGGATCTGCCTTTTA CATCGTACTGGTGGCTGCCATTTATCCATCGTTGGCAGACTCAAAAATCATCAATCATTATTTACAGCAGCTGCCAAGCG GGTTTCTAAAAGCGTTCAACATCACCGGTATGGGCAATTTGCTTGAATTCATCGCCGGTGAATATTACGGATTGCTGTTT CTTTTGCTCGGGTCCATTTATTGCATTACCGCTGCCAATCAACTGCTGGCTCGGCCCATCGACCGCGGTTCGATGGCATA TTTGCTTGCGACGCCGAATTCCCGGCAGACCATCGCCTTCACCCAAGCGCTCGTGCTGCTCACTGGACTAGCAGCCATCA TCCTCACCTCCGCAGCGGCCGGCTTTGCTGCCGATGCATGGCTAGTCACGAATGATGCTCTGCACCAAAAACGATTTCTC GCAATCAATGTCAGTGGCTTTCTTCTCTTTTTCGCCATTAGCGGCTATTCATTTTTCTTTTGCGCCATAGCCAATGACGA AAAACGAGCGCTGTCTTTATCCGGCGGGATCACCGTTCTGTTTTACAGTTTCGATCTCATCGGCAAGCTGACTGAAAAAG CGGAATGGCTCCGGTATGGATCGATTTTTGCCGCCTTCGAGCCTGGAGCCATCGCTCAAGGTCAAGCGGAATGGCTCCCA TCCTGTCTGCTATTGGCAATCGGCGTTATCAGCTACACAGCGGGGATTGTCACTTTTTCCAAACGCGATTTGCCGCTTTA A
Upstream 100 bases:
>100_bases TCGCGAGCTGGCCCAATACCAAGTGCAAAATCTCGATCTCCGCACACAAAGCCTAGAAGATATTTTTATGCATTACTATG ACCGCCGGGGGGGATGAACA
Downstream 100 bases:
>100_bases TGACACCATCACGGAAAAAGGGCTGCTCCTTTGGGAAGCAGCCCTTTTTTGGCGCTCAATCTTCATCGCTGGCGAAAAAA CGCAAAATATAAACAAACAA
Product: ABC transporter permease
Products: NA
Alternate protein names: ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Component; Permease; ABC-2 Type Transport System Permease Protein; ABC Transporter Permease; ABC Transporter Permease Component
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MNVSLYKQMLKAQTKTIIGYSTGSAFYIVLVAAIYPSLADSKIINHYLQQLPSGFLKAFNITGMGNLLEFIAGEYYGLLF LLLGSIYCITAANQLLARPIDRGSMAYLLATPNSRQTIAFTQALVLLTGLAAIILTSAAAGFAADAWLVTNDALHQKRFL AINVSGFLLFFAISGYSFFFCAIANDEKRALSLSGGITVLFYSFDLIGKLTEKAEWLRYGSIFAAFEPGAIAQGQAEWLP SCLLLAIGVISYTAGIVTFSKRDLPL
Sequences:
>Translated_266_residues MNVSLYKQMLKAQTKTIIGYSTGSAFYIVLVAAIYPSLADSKIINHYLQQLPSGFLKAFNITGMGNLLEFIAGEYYGLLF LLLGSIYCITAANQLLARPIDRGSMAYLLATPNSRQTIAFTQALVLLTGLAAIILTSAAAGFAADAWLVTNDALHQKRFL AINVSGFLLFFAISGYSFFFCAIANDEKRALSLSGGITVLFYSFDLIGKLTEKAEWLRYGSIFAAFEPGAIAQGQAEWLP SCLLLAIGVISYTAGIVTFSKRDLPL >Mature_266_residues MNVSLYKQMLKAQTKTIIGYSTGSAFYIVLVAAIYPSLADSKIINHYLQQLPSGFLKAFNITGMGNLLEFIAGEYYGLLF LLLGSIYCITAANQLLARPIDRGSMAYLLATPNSRQTIAFTQALVLLTGLAAIILTSAAAGFAADAWLVTNDALHQKRFL AINVSGFLLFFAISGYSFFFCAIANDEKRALSLSGGITVLFYSFDLIGKLTEKAEWLRYGSIFAAFEPGAIAQGQAEWLP SCLLLAIGVISYTAGIVTFSKRDLPL
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28825; Mature: 28825
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSLYKQMLKAQTKTIIGYSTGSAFYIVLVAAIYPSLADSKIINHYLQQLPSGFLKAFN CCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHC ITGMGNLLEFIAGEYYGLLFLLLGSIYCITAANQLLARPIDRGSMAYLLATPNSRQTIAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHH TQALVLLTGLAAIILTSAAAGFAADAWLVTNDALHQKRFLAINVSGFLLFFAISGYSFFF HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCEEEEEEHHHHHHHHHHCCCEEEE CAIANDEKRALSLSGGITVLFYSFDLIGKLTEKAEWLRYGSIFAAFEPGAIAQGQAEWLP EEEECCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHH SCLLLAIGVISYTAGIVTFSKRDLPL HHHHHHHHHHHHHHHHEEECCCCCCC >Mature Secondary Structure MNVSLYKQMLKAQTKTIIGYSTGSAFYIVLVAAIYPSLADSKIINHYLQQLPSGFLKAFN CCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHC ITGMGNLLEFIAGEYYGLLFLLLGSIYCITAANQLLARPIDRGSMAYLLATPNSRQTIAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHH TQALVLLTGLAAIILTSAAAGFAADAWLVTNDALHQKRFLAINVSGFLLFFAISGYSFFF HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCEEEEEEHHHHHHHHHHCCCEEEE CAIANDEKRALSLSGGITVLFYSFDLIGKLTEKAEWLRYGSIFAAFEPGAIAQGQAEWLP EEEECCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHH SCLLLAIGVISYTAGIVTFSKRDLPL HHHHHHHHHHHHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA