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The map label for this gene is yfiY [H]

Identifier: 138894979

GI number: 138894979

Start: 1404371

End: 1405342

Strand: Reverse

Name: yfiY [H]

Synonym: GTNG_1317

Alternate gene names: 138894979

Gene position: 1405342-1404371 (Counterclockwise)

Preceding gene: 138894989

Following gene: 138894978

Centisome position: 39.58

GC content: 48.05

Gene sequence:

>972_bases
GTGAAATTGAAACATCGCTCTCTTCTTTCCGTTTTCATCCTTTCTCTCCTTCTTCTCGCAGGCTGCGGCGGAAAACAGGA
AGAAGCGGGCCAATCAGCGAAAGATAACGAACCGAAAGCAGAAGAGAGCTACACGATCGAACACGCCATGGGCACGACAG
AAATCAAAGGAACTCCAAAACGGGTCGTCATTTTAACGAACGAAGGAACAGAAGCGCTTCTTGCGTTAGGCGTAAAACCG
GTCGGCGCTGTCAAATCGTGGACTGGCGATCCTTGGTATGACCACATCAAAGACAAAATGGACGGCGTCAAAGAGCTTGG
ATTGGAATCGGAACCGAGCGTTGAAGCCATTGCCGCTTTAAAACCGGACTTAATCATCGGCAACAAAATGCGTCATGAAA
AAATTTATGAGCAGTTAAAACAAATCGCACCGACCGTGTTCGCAAAGACGCTGCGCGGCAACTGGAAAGACAACTTTATG
CTGTATGCGAAAGCGGTGAACCAAGAAGAGAAAGGGAAGCAAGTCATTGCCGAATACGACAAGCGCGTTGAAGACTTAAA
AGCGAAACTTGGCGACAAACTGAAGATGGAAGTATCGATCGTCCGCTTTCTAGCCGGCGACGTCCGCATTTACCATAAAG
ACTCGTTCTCCGGTGTCATTTTGGACCAACTCGGCTTCGCCCGTCCGGAATCGCAAAACGTGAACGACTTCGCGGAAACA
GGCGTGACGAAAGAACGCATCCCGGCTATGGACGGCGACATCTTGTTCTACTTTACATATGAAACGGGGGACGGCAAAGC
GAACGAAATAGAAAAAGACTGGATCAACGATCCGCTCTTTCAAAACTTAAACGTTGCGAAACAAGGCAAAGTGTACAAAG
TGAGCGACACAATTTGGAACACCGCTGGCGGTGTGCTCGCGGCTCATTTGATGTTGGATGATATTGAGAAATACTTCTTG
GAACAACAATAA

Upstream 100 bases:

>100_bases
TTCTCATATTTTTTAATTTTATATTGACAATGATTATCGCTTTTATTTATTATACTATCGTAAATGAAATTCATTATCAA
CACCAAAGGGGGACGTAACT

Downstream 100 bases:

>100_bases
AGATACAACATGAAGCTGTACAAAACGGAGCACTCCCCTCGCTCCTTTGTGCAGCTTTTTTGTTCGCTTTTGCCGCCTCC
CACTCCATTTTAAGGAAACA

Product: Iron compound ABC transporter iron compound-bindingprotein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKLKHRSLLSVFILSLLLLAGCGGKQEEAGQSAKDNEPKAEESYTIEHAMGTTEIKGTPKRVVILTNEGTEALLALGVKP
VGAVKSWTGDPWYDHIKDKMDGVKELGLESEPSVEAIAALKPDLIIGNKMRHEKIYEQLKQIAPTVFAKTLRGNWKDNFM
LYAKAVNQEEKGKQVIAEYDKRVEDLKAKLGDKLKMEVSIVRFLAGDVRIYHKDSFSGVILDQLGFARPESQNVNDFAET
GVTKERIPAMDGDILFYFTYETGDGKANEIEKDWINDPLFQNLNVAKQGKVYKVSDTIWNTAGGVLAAHLMLDDIEKYFL
EQQ

Sequences:

>Translated_323_residues
MKLKHRSLLSVFILSLLLLAGCGGKQEEAGQSAKDNEPKAEESYTIEHAMGTTEIKGTPKRVVILTNEGTEALLALGVKP
VGAVKSWTGDPWYDHIKDKMDGVKELGLESEPSVEAIAALKPDLIIGNKMRHEKIYEQLKQIAPTVFAKTLRGNWKDNFM
LYAKAVNQEEKGKQVIAEYDKRVEDLKAKLGDKLKMEVSIVRFLAGDVRIYHKDSFSGVILDQLGFARPESQNVNDFAET
GVTKERIPAMDGDILFYFTYETGDGKANEIEKDWINDPLFQNLNVAKQGKVYKVSDTIWNTAGGVLAAHLMLDDIEKYFL
EQQ
>Mature_323_residues
MKLKHRSLLSVFILSLLLLAGCGGKQEEAGQSAKDNEPKAEESYTIEHAMGTTEIKGTPKRVVILTNEGTEALLALGVKP
VGAVKSWTGDPWYDHIKDKMDGVKELGLESEPSVEAIAALKPDLIIGNKMRHEKIYEQLKQIAPTVFAKTLRGNWKDNFM
LYAKAVNQEEKGKQVIAEYDKRVEDLKAKLGDKLKMEVSIVRFLAGDVRIYHKDSFSGVILDQLGFARPESQNVNDFAET
GVTKERIPAMDGDILFYFTYETGDGKANEIEKDWINDPLFQNLNVAKQGKVYKVSDTIWNTAGGVLAAHLMLDDIEKYFL
EQQ

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=283, Percent_Identity=28.2685512367491, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36124; Mature: 36124

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKHRSLLSVFILSLLLLAGCGGKQEEAGQSAKDNEPKAEESYTIEHAMGTTEIKGTPK
CCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCEEHHHHCCCCEECCCCC
RVVILTNEGTEALLALGVKPVGAVKSWTGDPWYDHIKDKMDGVKELGLESEPSVEAIAAL
EEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
KPDLIIGNKMRHEKIYEQLKQIAPTVFAKTLRGNWKDNFMLYAKAVNQEEKGKQVIAEYD
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCHHHHHHHHHHHH
KRVEDLKAKLGDKLKMEVSIVRFLAGDVRIYHKDSFSGVILDQLGFARPESQNVNDFAET
HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCEEHHHHHCCCCCCCCCCHHHHHC
GVTKERIPAMDGDILFYFTYETGDGKANEIEKDWINDPLFQNLNVAKQGKVYKVSDTIWN
CCCHHHCCCCCCCEEEEEEEECCCCCCHHCHHHHCCCHHHHCCCHHHCCCEEEECHHHHH
TAGGVLAAHLMLDDIEKYFLEQQ
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLKHRSLLSVFILSLLLLAGCGGKQEEAGQSAKDNEPKAEESYTIEHAMGTTEIKGTPK
CCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCEEHHHHCCCCEECCCCC
RVVILTNEGTEALLALGVKPVGAVKSWTGDPWYDHIKDKMDGVKELGLESEPSVEAIAAL
EEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
KPDLIIGNKMRHEKIYEQLKQIAPTVFAKTLRGNWKDNFMLYAKAVNQEEKGKQVIAEYD
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCHHHHHHHHHHHH
KRVEDLKAKLGDKLKMEVSIVRFLAGDVRIYHKDSFSGVILDQLGFARPESQNVNDFAET
HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCEEHHHHHCCCCCCCCCCHHHHHC
GVTKERIPAMDGDILFYFTYETGDGKANEIEKDWINDPLFQNLNVAKQGKVYKVSDTIWN
CCCHHHCCCCCCCEEEEEEEECCCCCCHHCHHHHCCCHHHHCCCHHHCCCEEEECHHHHH
TAGGVLAAHLMLDDIEKYFLEQQ
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]