| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138894850
Identifier: 138894850
GI number: 138894850
Start: 1255863
End: 1256249
Strand: Direct
Name: 138894850
Synonym: GTNG_1186
Alternate gene names: NA
Gene position: 1255863-1256249 (Clockwise)
Preceding gene: 138894849
Following gene: 138894851
Centisome position: 35.37
GC content: 49.87
Gene sequence:
>387_bases ATGAACAGCAAGGGCGGCATTGACTGCGTGTTGTCCTTGGCTCTGAAGGTGCGGATCGGCAAAGAAAGAAGGTCAAGATG TCATCGTTGCCATCTCCCCGTGTCATCGGATAAGATAAAACAGAACGATAATATGGTAGATAGGAGAAGATGCTCAATGC TTGCCAAACATAAATTGGCCCGCATCAATGAGCTGGCCAAAAAGGCAAAAACGGTCGGCTTGTCGCCGGAAGAAGTGATG GAGCAGGCAAAGCTGCGCCGCGAATACATTCAGGCGTTTCGCAAAGCGATGACCGATATGCTTCACACGGTGAAGGTCAT CGACCCGAACGGCAATGACGTGACGCCTAAAAAATTAAAGGAAAGCCAGCGCCATCGCCTCCATTAA
Upstream 100 bases:
>100_bases GAGCGCGGCTTGACGTTTGCGGACATCGCTGCGACGCTCCGGAGCTTTGGTTACGAGGCGTCCAAAGCGACCGTCCATCG CCGCTATCAAGAGTATATGG
Downstream 100 bases:
>100_bases CCGGCAGTTAAGAAAGGCGAAGGCTCCTTGTTTTTTGACAGCGAAAATAACGTTGTACAAAGAAGTCAATTTTCTATATG ATAGTAAATGACACCATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MNSKGGIDCVLSLALKVRIGKERRSRCHRCHLPVSSDKIKQNDNMVDRRRCSMLAKHKLARINELAKKAKTVGLSPEEVM EQAKLRREYIQAFRKAMTDMLHTVKVIDPNGNDVTPKKLKESQRHRLH
Sequences:
>Translated_128_residues MNSKGGIDCVLSLALKVRIGKERRSRCHRCHLPVSSDKIKQNDNMVDRRRCSMLAKHKLARINELAKKAKTVGLSPEEVM EQAKLRREYIQAFRKAMTDMLHTVKVIDPNGNDVTPKKLKESQRHRLH >Mature_128_residues MNSKGGIDCVLSLALKVRIGKERRSRCHRCHLPVSSDKIKQNDNMVDRRRCSMLAKHKLARINELAKKAKTVGLSPEEVM EQAKLRREYIQAFRKAMTDMLHTVKVIDPNGNDVTPKKLKESQRHRLH
Specific function: Unknown
COG id: COG4224
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0291 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009242 - InterPro: IPR023218 [H]
Pfam domain/function: PF05979 DUF896 [H]
EC number: NA
Molecular weight: Translated: 14768; Mature: 14768
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKGGIDCVLSLALKVRIGKERRSRCHRCHLPVSSDKIKQNDNMVDRRRCSMLAKHKLA CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH RINELAKKAKTVGLSPEEVMEQAKLRREYIQAFRKAMTDMLHTVKVIDPNGNDVTPKKLK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH ESQRHRLH HHHHHCCC >Mature Secondary Structure MNSKGGIDCVLSLALKVRIGKERRSRCHRCHLPVSSDKIKQNDNMVDRRRCSMLAKHKLA CCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH RINELAKKAKTVGLSPEEVMEQAKLRREYIQAFRKAMTDMLHTVKVIDPNGNDVTPKKLK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH ESQRHRLH HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA