| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is tkt [H]
Identifier: 138894851
GI number: 138894851
Start: 1256327
End: 1258375
Strand: Direct
Name: tkt [H]
Synonym: GTNG_1187
Alternate gene names: 138894851
Gene position: 1256327-1258375 (Clockwise)
Preceding gene: 138894850
Following gene: 138894852
Centisome position: 35.39
GC content: 55.69
Gene sequence:
>2049_bases ATGATAGTAAATGACACCATATTGACGAAGGGGAGGAAAATGATGGCGCATTCGATTGAACAACTAGCGATTACGACGAT TCGAACGCTGTCGATTGACGCGATCGAAAAGGCGAAATCCGGGCATCCGGGCATGCCGATGGGCGCGGCACCGATGGCGT ACACCCTTTGGACGAAATTCATGAATCATAATCCGGCGAATCCAAACTGGTTCAACCGCGACCGGTTTGTCTTGTCAGCT GGGCACGGGTCGATGCTGCTTTACAGCCTGCTTCATTTAAGCGGCTACGACGTATCGATGGACGACTTGAAACAGTTCCG CCAATGGGGAAGCAAAACGCCAGGGCATCCGGAATACGGCCATACGCCGGGAGTGGAAGCGACGACCGGCCCGCTCGGCC AAGGAATTGCGATGGCAGTCGGTATGGCGATGGCTGAGCGGCATTTGGCGGCTACATACAATCGTGACGGGTTTGACATG ATCGACCATTATACGTACGCGATTTGCGGCGATGGTGATTTAATGGAAGGAGTGGCGAGCGAAGCTGCATCACTCGCTGG TCATTTGCAGTTGGGCCGCTTGATCGTTCTGTATGATTCGAACGACATTTCCCTGGACGGAGAGCTTAACCTATCGTTCT CGGAAAACGTCGCTCAACGGTTCCAAGCGTACGGTTGGCAATATTTGCGCGTCGAAGATGGCAACAACATCGAGGAAATC GCCAAAGCGCTTGAAGAGGCGCGGGCTGACCTCAACCGGCCGACGCTCATTGAAGTGAAAACGACGATCGGCTACGGCTC GCCGACGAAAGCAGGCACATCGAGTGTTCACGGCGCTCCGCTCGGTGCAGAAGAGGCGAAATTGACAAAAGAAGCGTATC GCTGGACGTTTGCCGAAGATTTCTATGTGCCGGAAGAAGTGTATGCCCATTTCCGGGAAACGGTACAAGAAGTCGGGGCG AAAAAAGAAGCCGAATGGAATGAACGATTGGCCGCTTACGAGCAGGCGTATCCAGAATTGGCCGCCCAGCTGAAGCAGGC GATCGAAGGGAAACTTCCAGACGGTTGGGAAGCTGCGCTGCCGGTGTACGAAGCTGGAAAAAGTTTGGCGACCCGGTCGT CGTCCGGGGAAGTCATCAACGCCATTGCCAAAGCGGTGCCGCAGTTGTTGGGCGGTTCAGCGGACTTGGCAAGCTCGAAC AAAACGCTTATTAAAGAAGGCGGCAATTTCTTGCCGGGCAGCTATGAAGGGCGCAACATTTGGTTTGGTGTGCGCGAATT TGCCATGGGAGCGGCGTTAAACGGCATGGCGCTCCATGGCGGGGTGAAAGTATTTGGTGGCACGTTCTTCGTGTTCTCCG ACTATTTGCGTCCGGCGATTCGATTAGCAGCGCTCATGGGGCTGCCGGTTACCTATGTTTTGACGCATGACAGCGTTGCT GTCGGTGAAGACGGCCCGACGCACGAGCCGATTGAACAGCTCGCTTCCTTAAGAGCGATGCCGAATTTGTCAGTCATCCG ACCGGCTGACGCGAACGAAACGGCGGCGGCATGGCGTCTGGCGGTTGAATCGACGGACAAGCCGACCGCGCTCGTTCTGA CGCGTCAAAACATACCGACGTTGCCGACAACGGCTGATTTGGCATATGAAGGCGTGAAAAAAGGTGCGTACGTCGTCTCG CCGGCGAAAAACGGTGCTCCGGAGGCGCTGCTTTTGGCAACCGGTTCGGAAGTCAGCTTGGCGGTGCAAGCACAAGAAGC GCTCGCTGCCGAAGGGATTCACGTCTCGGTCGTCAGCATGCCATCGTGGGATCGCTTTGAAGCGCAGCCAAAAGCGTACC GTGATGAAGTGATTCCGCCGGCGGTGACGAAGCGGCTGGCCATTGAAATGGGCGCCTCGCTCGGTTGGGAGCGCTATGTT GGTGCGGATGGCGACATTTTAGCCATCGATCGGTTTGGCGCCTCCGCTCCGGGAGAAAAAATTATGGCGGAATACGGCTT TACCGTCGATAACGTCGTTCATCGCGTGAAAGCGTTGCTTGGCAAGTAA
Upstream 100 bases:
>100_bases GCCAGCGCCATCGCCTCCATTAACCGGCAGTTAAGAAAGGCGAAGGCTCCTTGTTTTTTGACAGCGAAAATAACGTTGTA CAAAGAAGTCAATTTTCTAT
Downstream 100 bases:
>100_bases TTCAATGACCGTGAGAACAGGTTGCCCTTGTGCTGTTGCAAGGGCAACTTTTTTGCCCTATTTGCGGCCGCTGGTCACTA TAAACAAAAATCGACAATGT
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MIVNDTILTKGRKMMAHSIEQLAITTIRTLSIDAIEKAKSGHPGMPMGAAPMAYTLWTKFMNHNPANPNWFNRDRFVLSA GHGSMLLYSLLHLSGYDVSMDDLKQFRQWGSKTPGHPEYGHTPGVEATTGPLGQGIAMAVGMAMAERHLAATYNRDGFDM IDHYTYAICGDGDLMEGVASEAASLAGHLQLGRLIVLYDSNDISLDGELNLSFSENVAQRFQAYGWQYLRVEDGNNIEEI AKALEEARADLNRPTLIEVKTTIGYGSPTKAGTSSVHGAPLGAEEAKLTKEAYRWTFAEDFYVPEEVYAHFRETVQEVGA KKEAEWNERLAAYEQAYPELAAQLKQAIEGKLPDGWEAALPVYEAGKSLATRSSSGEVINAIAKAVPQLLGGSADLASSN KTLIKEGGNFLPGSYEGRNIWFGVREFAMGAALNGMALHGGVKVFGGTFFVFSDYLRPAIRLAALMGLPVTYVLTHDSVA VGEDGPTHEPIEQLASLRAMPNLSVIRPADANETAAAWRLAVESTDKPTALVLTRQNIPTLPTTADLAYEGVKKGAYVVS PAKNGAPEALLLATGSEVSLAVQAQEALAAEGIHVSVVSMPSWDRFEAQPKAYRDEVIPPAVTKRLAIEMGASLGWERYV GADGDILAIDRFGASAPGEKIMAEYGFTVDNVVHRVKALLGK
Sequences:
>Translated_682_residues MIVNDTILTKGRKMMAHSIEQLAITTIRTLSIDAIEKAKSGHPGMPMGAAPMAYTLWTKFMNHNPANPNWFNRDRFVLSA GHGSMLLYSLLHLSGYDVSMDDLKQFRQWGSKTPGHPEYGHTPGVEATTGPLGQGIAMAVGMAMAERHLAATYNRDGFDM IDHYTYAICGDGDLMEGVASEAASLAGHLQLGRLIVLYDSNDISLDGELNLSFSENVAQRFQAYGWQYLRVEDGNNIEEI AKALEEARADLNRPTLIEVKTTIGYGSPTKAGTSSVHGAPLGAEEAKLTKEAYRWTFAEDFYVPEEVYAHFRETVQEVGA KKEAEWNERLAAYEQAYPELAAQLKQAIEGKLPDGWEAALPVYEAGKSLATRSSSGEVINAIAKAVPQLLGGSADLASSN KTLIKEGGNFLPGSYEGRNIWFGVREFAMGAALNGMALHGGVKVFGGTFFVFSDYLRPAIRLAALMGLPVTYVLTHDSVA VGEDGPTHEPIEQLASLRAMPNLSVIRPADANETAAAWRLAVESTDKPTALVLTRQNIPTLPTTADLAYEGVKKGAYVVS PAKNGAPEALLLATGSEVSLAVQAQEALAAEGIHVSVVSMPSWDRFEAQPKAYRDEVIPPAVTKRLAIEMGASLGWERYV GADGDILAIDRFGASAPGEKIMAEYGFTVDNVVHRVKALLGK >Mature_682_residues MIVNDTILTKGRKMMAHSIEQLAITTIRTLSIDAIEKAKSGHPGMPMGAAPMAYTLWTKFMNHNPANPNWFNRDRFVLSA GHGSMLLYSLLHLSGYDVSMDDLKQFRQWGSKTPGHPEYGHTPGVEATTGPLGQGIAMAVGMAMAERHLAATYNRDGFDM IDHYTYAICGDGDLMEGVASEAASLAGHLQLGRLIVLYDSNDISLDGELNLSFSENVAQRFQAYGWQYLRVEDGNNIEEI AKALEEARADLNRPTLIEVKTTIGYGSPTKAGTSSVHGAPLGAEEAKLTKEAYRWTFAEDFYVPEEVYAHFRETVQEVGA KKEAEWNERLAAYEQAYPELAAQLKQAIEGKLPDGWEAALPVYEAGKSLATRSSSGEVINAIAKAVPQLLGGSADLASSN KTLIKEGGNFLPGSYEGRNIWFGVREFAMGAALNGMALHGGVKVFGGTFFVFSDYLRPAIRLAALMGLPVTYVLTHDSVA VGEDGPTHEPIEQLASLRAMPNLSVIRPADANETAAAWRLAVESTDKPTALVLTRQNIPTLPTTADLAYEGVKKGAYVVS PAKNGAPEALLLATGSEVSLAVQAQEALAAEGIHVSVVSMPSWDRFEAQPKAYRDEVIPPAVTKRLAIEMGASLGWERYV GADGDILAIDRFGASAPGEKIMAEYGFTVDNVVHRVKALLGK
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=593, Percent_Identity=26.8128161888702, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI4507521, Length=593, Percent_Identity=26.8128161888702, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI133778974, Length=588, Percent_Identity=26.1904761904762, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI225637459, Length=519, Percent_Identity=23.121387283237, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI225637463, Length=419, Percent_Identity=24.1050119331742, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI225637461, Length=419, Percent_Identity=24.1050119331742, Blast_Score=105, Evalue=2e-22, Organism=Escherichia coli, GI48994911, Length=659, Percent_Identity=51.7450682852807, Blast_Score=673, Evalue=0.0, Organism=Escherichia coli, GI1788808, Length=660, Percent_Identity=48.3333333333333, Blast_Score=625, Evalue=1e-180, Organism=Caenorhabditis elegans, GI17539652, Length=597, Percent_Identity=28.643216080402, Blast_Score=171, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6325331, Length=670, Percent_Identity=49.2537313432836, Blast_Score=649, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319593, Length=673, Percent_Identity=46.9539375928678, Blast_Score=603, Evalue=1e-173, Organism=Drosophila melanogaster, GI45551847, Length=595, Percent_Identity=27.3949579831933, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI45550715, Length=595, Percent_Identity=27.3949579831933, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24666278, Length=587, Percent_Identity=27.5979557069847, Blast_Score=165, Evalue=9e-41, Organism=Drosophila melanogaster, GI24645119, Length=567, Percent_Identity=26.984126984127, Blast_Score=155, Evalue=9e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 73621; Mature: 73621
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00037 MYB_1 ; PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVNDTILTKGRKMMAHSIEQLAITTIRTLSIDAIEKAKSGHPGMPMGAAPMAYTLWTKF CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH MNHNPANPNWFNRDRFVLSAGHGSMLLYSLLHLSGYDVSMDDLKQFRQWGSKTPGHPEYG HCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC HTPGVEATTGPLGQGIAMAVGMAMAERHLAATYNRDGFDMIDHYTYAICGDGDLMEGVAS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCEEEEEECCCHHHHHHHH EAASLAGHLQLGRLIVLYDSNDISLDGELNLSFSENVAQRFQAYGWQYLRVEDGNNIEEI HHHHHHHHHEECCEEEEECCCCEEECCEEECCHHHHHHHHHHHCCEEEEEEECCCCHHHH AKALEEARADLNRPTLIEVKTTIGYGSPTKAGTSSVHGAPLGAEEAKLTKEAYRWTFAED HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECHHC FYVPEEVYAHFRETVQEVGAKKEAEWNERLAAYEQAYPELAAQLKQAIEGKLPDGWEAAL CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC PVYEAGKSLATRSSSGEVINAIAKAVPQLLGGSADLASSNKTLIKEGGNFLPGSYEGRNI CHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCEE WFGVREFAMGAALNGMALHGGVKVFGGTFFVFSDYLRPAIRLAALMGLPVTYVLTHDSVA EEEHHHHHHHHHCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEE VGEDGPTHEPIEQLASLRAMPNLSVIRPADANETAAAWRLAVESTDKPTALVLTRQNIPT ECCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHEEEEECCCCCCEEEEEECCCCCC LPTTADLAYEGVKKGAYVVSPAKNGAPEALLLATGSEVSLAVQAQEALAAEGIHVSVVSM CCCHHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCCEEEEEEHHHHHHHCCCEEEEEEC PSWDRFEAQPKAYRDEVIPPAVTKRLAIEMGASLGWERYVGADGDILAIDRFGASAPGEK CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEECCCCCCCCHH IMAEYGFTVDNVVHRVKALLGK HHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIVNDTILTKGRKMMAHSIEQLAITTIRTLSIDAIEKAKSGHPGMPMGAAPMAYTLWTKF CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH MNHNPANPNWFNRDRFVLSAGHGSMLLYSLLHLSGYDVSMDDLKQFRQWGSKTPGHPEYG HCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC HTPGVEATTGPLGQGIAMAVGMAMAERHLAATYNRDGFDMIDHYTYAICGDGDLMEGVAS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCEEEEEECCCHHHHHHHH EAASLAGHLQLGRLIVLYDSNDISLDGELNLSFSENVAQRFQAYGWQYLRVEDGNNIEEI HHHHHHHHHEECCEEEEECCCCEEECCEEECCHHHHHHHHHHHCCEEEEEEECCCCHHHH AKALEEARADLNRPTLIEVKTTIGYGSPTKAGTSSVHGAPLGAEEAKLTKEAYRWTFAED HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECHHC FYVPEEVYAHFRETVQEVGAKKEAEWNERLAAYEQAYPELAAQLKQAIEGKLPDGWEAAL CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC PVYEAGKSLATRSSSGEVINAIAKAVPQLLGGSADLASSNKTLIKEGGNFLPGSYEGRNI CHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCEE WFGVREFAMGAALNGMALHGGVKVFGGTFFVFSDYLRPAIRLAALMGLPVTYVLTHDSVA EEEHHHHHHHHHCCCEEEECCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEE VGEDGPTHEPIEQLASLRAMPNLSVIRPADANETAAAWRLAVESTDKPTALVLTRQNIPT ECCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCHHHEEEEECCCCCCEEEEEECCCCCC LPTTADLAYEGVKKGAYVVSPAKNGAPEALLLATGSEVSLAVQAQEALAAEGIHVSVVSM CCCHHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCCEEEEEEHHHHHHHCCCEEEEEEC PSWDRFEAQPKAYRDEVIPPAVTKRLAIEMGASLGWERYVGADGDILAIDRFGASAPGEK CCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEECCCCCCCCHH IMAEYGFTVDNVVHRVKALLGK HHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]