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The map label for this gene is sdaAB [H]

Identifier: 138894704

GI number: 138894704

Start: 1105290

End: 1105952

Strand: Direct

Name: sdaAB [H]

Synonym: GTNG_1036

Alternate gene names: 138894704

Gene position: 1105290-1105952 (Clockwise)

Preceding gene: 138894703

Following gene: 138894705

Centisome position: 31.13

GC content: 48.72

Gene sequence:

>663_bases
ATGAAATACAAAAGTGTCTTTGATATTATCGGTCCAGTAATGGTGGGGCCGTCGAGTTCGCATACAGCTGGGGCAGCGCG
CATTGGTCTTGTTGCGCGCAAACTGTTTGGCAGAAAACCGGAGTGGGCGCACATCTCATTTTACGGATCGTTTGCTGAGA
CGTACCGCGGGCATGGCACCGATGTCGCCATCGTCGCTGGGTTGCTCGGTTTTGATACGTTTGATGACCGTCTTCCGAAT
GCGCTCGAAATTGCTCGCATCGAAGGGCTCGATGTATCTTTTTTCACGGAAGAAGCGATTCCACATCATCCGAATACAGC
GCGTCTGCGGATTGGCGATGATAAAGGAAAACTCGAGCTTGTCGGTGTTTCCATCGGCGGAGGGAAAATCGAAATTATCG
AGTTAAATGGCTTTGACTTGAAGTTATCCGGCCATCATCCGGCGCTACTAATCATGCATAATGATCGATATGGGACGATT
GGAGCAGTAGCCAGCACATTGGCAAAGCATGCGATTAATATCGGTCATATGGAAGTGTCGCGCAAGGAAAAAGGAAAAGA
AGCGTTGATGACGATCGAGGTCGACCAGCCGCTGTCAGATGATCTTATCCAAGAGTTGGAACAGTTACCAAATATCATTC
AGGTCACGAAGCTTGTCGATTAA

Upstream 100 bases:

>100_bases
CAGCCGTTATACCCGTTTGTCATTTCTGTTGAGTAATATGTTAAGATAATAGAAGGGAGAGTTCCCTTCTATTTTTTCTG
TACGAACGGGGGTCGCAACG

Downstream 100 bases:

>100_bases
AAAAAGAAAGCGGTTGCGAACGGGCATGGAAGTGAAACAGCAGCGGTGCTTTGTCAAGAAAGGATGGGATAATGAATGTT
TCGCAATGTCGCTGAACTTG

Product: L-serine dehydratase subunit beta

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKYKSVFDIIGPVMVGPSSSHTAGAARIGLVARKLFGRKPEWAHISFYGSFAETYRGHGTDVAIVAGLLGFDTFDDRLPN
ALEIARIEGLDVSFFTEEAIPHHPNTARLRIGDDKGKLELVGVSIGGGKIEIIELNGFDLKLSGHHPALLIMHNDRYGTI
GAVASTLAKHAINIGHMEVSRKEKGKEALMTIEVDQPLSDDLIQELEQLPNIIQVTKLVD

Sequences:

>Translated_220_residues
MKYKSVFDIIGPVMVGPSSSHTAGAARIGLVARKLFGRKPEWAHISFYGSFAETYRGHGTDVAIVAGLLGFDTFDDRLPN
ALEIARIEGLDVSFFTEEAIPHHPNTARLRIGDDKGKLELVGVSIGGGKIEIIELNGFDLKLSGHHPALLIMHNDRYGTI
GAVASTLAKHAINIGHMEVSRKEKGKEALMTIEVDQPLSDDLIQELEQLPNIIQVTKLVD
>Mature_220_residues
MKYKSVFDIIGPVMVGPSSSHTAGAARIGLVARKLFGRKPEWAHISFYGSFAETYRGHGTDVAIVAGLLGFDTFDDRLPN
ALEIARIEGLDVSFFTEEAIPHHPNTARLRIGDDKGKLELVGVSIGGGKIEIIELNGFDLKLSGHHPALLIMHNDRYGTI
GAVASTLAKHAINIGHMEVSRKEKGKEALMTIEVDQPLSDDLIQELEQLPNIIQVTKLVD

Specific function: Deaminates Also Threonine, Particularly When It Is Present In High Concentration. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR004643
- InterPro:   IPR005131 [H]

Pfam domain/function: PF01842 ACT; PF03315 SDH_beta [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 23958; Mature: 23958

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKSVFDIIGPVMVGPSSSHTAGAARIGLVARKLFGRKPEWAHISFYGSFAETYRGHGT
CCCHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHCCCCC
DVAIVAGLLGFDTFDDRLPNALEIARIEGLDVSFFTEEAIPHHPNTARLRIGDDKGKLEL
CHHHHHHHHCCCCHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCEEE
VGVSIGGGKIEIIELNGFDLKLSGHHPALLIMHNDRYGTIGAVASTLAKHAINIGHMEVS
EEEEECCCEEEEEEECCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEC
RKEKGKEALMTIEVDQPLSDDLIQELEQLPNIIQVTKLVD
HHHCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MKYKSVFDIIGPVMVGPSSSHTAGAARIGLVARKLFGRKPEWAHISFYGSFAETYRGHGT
CCCHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHCCCCC
DVAIVAGLLGFDTFDDRLPNALEIARIEGLDVSFFTEEAIPHHPNTARLRIGDDKGKLEL
CHHHHHHHHCCCCHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCEEE
VGVSIGGGKIEIIELNGFDLKLSGHHPALLIMHNDRYGTIGAVASTLAKHAINIGHMEVS
EEEEECCCEEEEEEECCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEC
RKEKGKEALMTIEVDQPLSDDLIQELEQLPNIIQVTKLVD
HHHCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]