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The map label for this gene is prpC [H]

Identifier: 138894696

GI number: 138894696

Start: 1097465

End: 1098214

Strand: Direct

Name: prpC [H]

Synonym: GTNG_1028

Alternate gene names: 138894696

Gene position: 1097465-1098214 (Clockwise)

Preceding gene: 138894695

Following gene: 138894697

Centisome position: 30.91

GC content: 52.53

Gene sequence:

>750_bases
ATGCAAGCCGTTTTCCGAACCGATATCGGGCAAATTCGCGAGTATAACGAAGACAGTGGCGGCGTATTTGCCAATCAAAG
CGGCCAATATTTAGCGGTCGTCGCTGATGGGATGGGTGGTCACCGTGCTGGCGATGTAGCGAGCGCGATGGCTGTCGCAT
ATTTGCAACAACAATGGGAGCAAGAGCGTCATCTCTCTTCGCCAACTGAGGCTGAACAATGGTTGAAATCGCATATTGCG
GTTGCGAACGAACGATTGCTTCGCCATGCGCTTTCTCACCCGGAATGCCAAGGGATGGGGACGACGGTCGTCGTTGCGAT
TTGCACCAGCTCGTTTGTCACAATTGCTCATATCGGCGACAGCCGCTGTTACTTGTTGAACCAAAACGGAATCCAGCAGC
TGACCGATGACCATTCCCTTGTCAATGAGCTTGTCAAAAGCGGACAAATTTCCAAGGAAGATGCCGAGCATCACCCGCGC
AAAAATGTGCTCTTGCGGGCGCTCGGCACCGAGCCAGCGGTGAAGATTGATGTCAAAACCGTCTCGATTGACGAGGACGA
TATGCTTCTTTTATGTTCGGACGGGTTGTCCAATAAAGTGCCAGAAGCGGACATCGTACATATTTTGACAAGCGGCGGCA
CGCTCGAGGAAAAGGCCGAGGCGCTCATTGATTTAGCGAACGAGCGGGGTGGGGAAGATAACATTTCGCTGGCGGTCATC
GATTTTTCATCGGAACGTGAAGGTGGGTGA

Upstream 100 bases:

>100_bases
GAATTAATGTCACCATTCGCCGCGAACACGGACATGACATCGATGCCGCCTGCGGACAGCTTCGCGCGAAGGAGCGAAAA
GAAGAGACGAGGTGAATCGG

Downstream 100 bases:

>100_bases
TCGGCGTGCTCATCGGAAAACGATTGAATGACCGTTATAAAATCATCAGCCTCATCGGCGGCGGCGGCATGGCGAACGTT
TATTTAGCGCGAGACATCAT

Product: protein phosphatase 2C, family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MQAVFRTDIGQIREYNEDSGGVFANQSGQYLAVVADGMGGHRAGDVASAMAVAYLQQQWEQERHLSSPTEAEQWLKSHIA
VANERLLRHALSHPECQGMGTTVVVAICTSSFVTIAHIGDSRCYLLNQNGIQQLTDDHSLVNELVKSGQISKEDAEHHPR
KNVLLRALGTEPAVKIDVKTVSIDEDDMLLLCSDGLSNKVPEADIVHILTSGGTLEEKAEALIDLANERGGEDNISLAVI
DFSSEREGG

Sequences:

>Translated_249_residues
MQAVFRTDIGQIREYNEDSGGVFANQSGQYLAVVADGMGGHRAGDVASAMAVAYLQQQWEQERHLSSPTEAEQWLKSHIA
VANERLLRHALSHPECQGMGTTVVVAICTSSFVTIAHIGDSRCYLLNQNGIQQLTDDHSLVNELVKSGQISKEDAEHHPR
KNVLLRALGTEPAVKIDVKTVSIDEDDMLLLCSDGLSNKVPEADIVHILTSGGTLEEKAEALIDLANERGGEDNISLAVI
DFSSEREGG
>Mature_249_residues
MQAVFRTDIGQIREYNEDSGGVFANQSGQYLAVVADGMGGHRAGDVASAMAVAYLQQQWEQERHLSSPTEAEQWLKSHIA
VANERLLRHALSHPECQGMGTTVVVAICTSSFVTIAHIGDSRCYLLNQNGIQQLTDDHSLVNELVKSGQISKEDAEHHPR
KNVLLRALGTEPAVKIDVKTVSIDEDDMLLLCSDGLSNKVPEADIVHILTSGGTLEEKAEALIDLANERGGEDNISLAVI
DFSSEREGG

Specific function: Protein phosphatase that dephosphorylates prkC and fusA (elongation factor G). PrpC and prkC are cotranscribed, which suggests that they form a functional couple in vivo, prpC's primary role being possibly to counter the action of prkC. May be involved in

COG id: COG0631

COG function: function code T; Serine/threonine protein phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015655
- InterPro:   IPR001932
- InterPro:   IPR014045 [H]

Pfam domain/function: PF00481 PP2C [H]

EC number: =3.1.3.16 [H]

Molecular weight: Translated: 26986; Mature: 26986

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAVFRTDIGQIREYNEDSGGVFANQSGQYLAVVADGMGGHRAGDVASAMAVAYLQQQWE
CCCHHHCCHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
QERHLSSPTEAEQWLKSHIAVANERLLRHALSHPECQGMGTTVVVAICTSSFVTIAHIGD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHCCCEEEEEECC
SRCYLLNQNGIQQLTDDHSLVNELVKSGQISKEDAEHHPRKNVLLRALGTEPAVKIDVKT
CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCCCCEEEEEEE
VSIDEDDMLLLCSDGLSNKVPEADIVHILTSGGTLEEKAEALIDLANERGGEDNISLAVI
EEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
DFSSEREGG
EECCCCCCC
>Mature Secondary Structure
MQAVFRTDIGQIREYNEDSGGVFANQSGQYLAVVADGMGGHRAGDVASAMAVAYLQQQWE
CCCHHHCCHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
QERHLSSPTEAEQWLKSHIAVANERLLRHALSHPECQGMGTTVVVAICTSSFVTIAHIGD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHCCCEEEEEECC
SRCYLLNQNGIQQLTDDHSLVNELVKSGQISKEDAEHHPRKNVLLRALGTEPAVKIDVKT
CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCCCCEEEEEEE
VSIDEDDMLLLCSDGLSNKVPEADIVHILTSGGTLEEKAEALIDLANERGGEDNISLAVI
EEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEE
DFSSEREGG
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]