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The map label for this gene is sepF

Identifier: 138894667

GI number: 138894667

Start: 1062715

End: 1063137

Strand: Direct

Name: sepF

Synonym: GTNG_0997

Alternate gene names: 138894667

Gene position: 1062715-1063137 (Clockwise)

Preceding gene: 138894666

Following gene: 138894668

Centisome position: 29.93

GC content: 52.48

Gene sequence:

>423_bases
ATGAAAAAATTTCGCGATTATTTTTTAGAGGAAGACTACGAAGACTATGAAGAAGAATATGAAGCGCCGCAGCAGGAAGA
GGAGGCGCTGCCGCTGAAGACGGCCAACAAGACGAATGTTGTCAGCTTGCAAAGCGTGCAAAAATCAGCGAAGGTCGTGC
TTGCCGAGCCGCGGGTGTACGCCGAGGCGCAAGAGATTGCCGACCATTTGAAAAGCCGGCGGGCGGTCATCGTCAATTTG
CAGCGTATCCAGCATGAGCAGGCGAAACGGATCGTCGACTTTTTAAGCGGAACCGTGTACGCCATTGGCGGCGACATTCA
GCAAGTCGGCACGAAAATTTTTTTATGCACGCCGGAAAACGTTGACGTCAGCGGCGCGATTTCGCTTGATGGCGAGGATG
ACAGACCGATGAAGAGGTGGTAG

Upstream 100 bases:

>100_bases
GTCAAACGACTATGAGATCGCCATCGAGGAAGGAGCGACGTTTGTACGCATCGGCAGTGCGCTTGTCGGATCATTGTAGG
AGGTGAGACCGGTGGGATTG

Downstream 100 bases:

>100_bases
CCGTTGGATTATGTGCTCACGTTTTTGACGACGCTCATTCAAGTATATTCGTATGCGTTGATCATTTATATTTTAATGTC
ATGGTTTCCGAACGCCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKKFRDYFLEEDYEDYEEEYEAPQQEEEALPLKTANKTNVVSLQSVQKSAKVVLAEPRVYAEAQEIADHLKSRRAVIVNL
QRIQHEQAKRIVDFLSGTVYAIGGDIQQVGTKIFLCTPENVDVSGAISLDGEDDRPMKRW

Sequences:

>Translated_140_residues
MKKFRDYFLEEDYEDYEEEYEAPQQEEEALPLKTANKTNVVSLQSVQKSAKVVLAEPRVYAEAQEIADHLKSRRAVIVNL
QRIQHEQAKRIVDFLSGTVYAIGGDIQQVGTKIFLCTPENVDVSGAISLDGEDDRPMKRW
>Mature_140_residues
MKKFRDYFLEEDYEDYEEEYEAPQQEEEALPLKTANKTNVVSLQSVQKSAKVVLAEPRVYAEAQEIADHLKSRRAVIVNL
QRIQHEQAKRIVDFLSGTVYAIGGDIQQVGTKIFLCTPENVDVSGAISLDGEDDRPMKRW

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_GEOTN (A4IM21)

Other databases:

- EMBL:   CP000557
- RefSeq:   YP_001125120.1
- STRING:   A4IM21
- GeneID:   4965940
- GenomeReviews:   CP000557_GR
- KEGG:   gtn:GTNG_0997
- NMPDR:   fig|420246.5.peg.966
- eggNOG:   COG1799
- HOGENOM:   HBG700081
- ProtClustDB:   CLSK2391183
- BioCyc:   GTHE420246:GTNG_0997-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 16019; Mature: 16019

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFRDYFLEEDYEDYEEEYEAPQQEEEALPLKTANKTNVVSLQSVQKSAKVVLAEPRVY
CCHHHHHHHCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCEEHHHHHHHCCCEEEECCHHH
AEAQEIADHLKSRRAVIVNLQRIQHEQAKRIVDFLSGTVYAIGGDIQQVGTKIFLCTPEN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCEEEEECCCC
VDVSGAISLDGEDDRPMKRW
CCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKKFRDYFLEEDYEDYEEEYEAPQQEEEALPLKTANKTNVVSLQSVQKSAKVVLAEPRVY
CCHHHHHHHCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCEEHHHHHHHCCCEEEECCHHH
AEAQEIADHLKSRRAVIVNLQRIQHEQAKRIVDFLSGTVYAIGGDIQQVGTKIFLCTPEN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCEEEEECCCC
VDVSGAISLDGEDDRPMKRW
CCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA