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The map label for this gene is ykuI [H]

Identifier: 138894575

GI number: 138894575

Start: 981529

End: 982749

Strand: Direct

Name: ykuI [H]

Synonym: GTNG_0905

Alternate gene names: 138894575

Gene position: 981529-982749 (Clockwise)

Preceding gene: 138894574

Following gene: 138894576

Centisome position: 27.65

GC content: 45.78

Gene sequence:

>1221_bases
ATGATGGATGCATTAGACGTGATGGCCAACTTGTCGCAAGCAATCCCGTACTATCAGCCGATTTTTAGCGCCGATGAGCA
TGGGGTCATCGGGTATGAAGTGCTCGGGCGATTTCAAACGGAAGCGGGGCCAGTCAGCCTCGGGCCGTTTTTTCATGACG
ACACGATCCCGGAAGAGTTTCGCATTGAAGTGGATGATGTCATTACAAAAAAGGCGCTTGATTATTTTTTGTCGCTGCCC
GACCAGACGCTGCTCATCTTTTTAAACCGTGACGCCAATTTGTTAATGCTTGACCGCGGCGAATCGTTTTTGCAATTGCT
TCTTGCTTATGAAGCGAAAGGGTTGGCGCTTAGCCGTATCGTATTGGAAATTAACGAGCAACATTTTAAAGGCGACTTGG
ATCAGTTCAGCCATTTATTGACGTATATCCGCACGTACGGCATTAAGGTGGCGGTCGATAATATCGCCGAACATAGCATT
CATCTCGAGCGGATCGGCGTTTTGTCGCCTGATATTTTAAAAATTGATTTGCATGAATTGCGGAAAACGTCTGTCCACCA
AGCTTATCAAGAAATCGTTCATTCCATTTCATTGTTGGCGCGCAAAATCGGAGCGACGCTTCTGTATGAAGATATTGAAA
CATCATTTCAGCTCCAGTACGCTTGGCGGCATGGCGGCCGCTATTACCAAGGGTATTATTTGGCCAAGCCGGCGCCAGAG
GTGGTGCCGCGTGATCTGTTGAAAGAGCTTCTCCGCCAAGAATGCCATCGGTTTATCCAACAAGAAAAGAAAAAGCTTGA
GACACTGTATCAAATTTCTGAGCAGTTTCAGCAACGGGTTGCCGCGTTGCTTGGCAAATATAAAAAAGTGAGCAGCTTTA
ATGAGCTCATTTCACTATTGGCTGACGAACTGAATGACGTTTGCTTCCGCATTTACGTTTGTGATGAGGACGGTTTTCAG
CAATCAGGCAATATGTTTAAGCGCGGTAGCCGCTGGGAGTTGCAGCAACAATATTACATGAAAAATTGGAGTTGGCGTCC
GTATTTTTTGGAAAACATTATTCGCATGCGTTCGCGCCGCAGAGGGATTCTATCGGATTTATATACAGACATTGAAACCG
GGGAGACGATTCGGACGTACTCGTACCCGATTGATGAGCATCATTATTTGTTTATCGATTTGTCGTACAGTTATTTATTT
GAGCATGACGCCCATTATTGA

Upstream 100 bases:

>100_bases
ACGGATTTCCTATGATTAGGAGATCCGTTTTTTCGTTCCGGAAAAGGTTGGTCAATATGGTATAATAAAGTCAAAGATGG
TCGACGAGAATGAGGTGAGC

Downstream 100 bases:

>100_bases
TGGTATAAAATCATCTTATTGCGGCAAAGTAAACATGAGGTGAAACTTATGGCACAGCTGACTTTTGTGTTATCTGCCCT
CTCTGTATTGATTGCGATCA

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MMDALDVMANLSQAIPYYQPIFSADEHGVIGYEVLGRFQTEAGPVSLGPFFHDDTIPEEFRIEVDDVITKKALDYFLSLP
DQTLLIFLNRDANLLMLDRGESFLQLLLAYEAKGLALSRIVLEINEQHFKGDLDQFSHLLTYIRTYGIKVAVDNIAEHSI
HLERIGVLSPDILKIDLHELRKTSVHQAYQEIVHSISLLARKIGATLLYEDIETSFQLQYAWRHGGRYYQGYYLAKPAPE
VVPRDLLKELLRQECHRFIQQEKKKLETLYQISEQFQQRVAALLGKYKKVSSFNELISLLADELNDVCFRIYVCDEDGFQ
QSGNMFKRGSRWELQQQYYMKNWSWRPYFLENIIRMRSRRRGILSDLYTDIETGETIRTYSYPIDEHHYLFIDLSYSYLF
EHDAHY

Sequences:

>Translated_406_residues
MMDALDVMANLSQAIPYYQPIFSADEHGVIGYEVLGRFQTEAGPVSLGPFFHDDTIPEEFRIEVDDVITKKALDYFLSLP
DQTLLIFLNRDANLLMLDRGESFLQLLLAYEAKGLALSRIVLEINEQHFKGDLDQFSHLLTYIRTYGIKVAVDNIAEHSI
HLERIGVLSPDILKIDLHELRKTSVHQAYQEIVHSISLLARKIGATLLYEDIETSFQLQYAWRHGGRYYQGYYLAKPAPE
VVPRDLLKELLRQECHRFIQQEKKKLETLYQISEQFQQRVAALLGKYKKVSSFNELISLLADELNDVCFRIYVCDEDGFQ
QSGNMFKRGSRWELQQQYYMKNWSWRPYFLENIIRMRSRRRGILSDLYTDIETGETIRTYSYPIDEHHYLFIDLSYSYLF
EHDAHY
>Mature_406_residues
MMDALDVMANLSQAIPYYQPIFSADEHGVIGYEVLGRFQTEAGPVSLGPFFHDDTIPEEFRIEVDDVITKKALDYFLSLP
DQTLLIFLNRDANLLMLDRGESFLQLLLAYEAKGLALSRIVLEINEQHFKGDLDQFSHLLTYIRTYGIKVAVDNIAEHSI
HLERIGVLSPDILKIDLHELRKTSVHQAYQEIVHSISLLARKIGATLLYEDIETSFQLQYAWRHGGRYYQGYYLAKPAPE
VVPRDLLKELLRQECHRFIQQEKKKLETLYQISEQFQQRVAALLGKYKKVSSFNELISLLADELNDVCFRIYVCDEDGFQ
QSGNMFKRGSRWELQQQYYMKNWSWRPYFLENIIRMRSRRRGILSDLYTDIETGETIRTYSYPIDEHHYLFIDLSYSYLF
EHDAHY

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1790496, Length=247, Percent_Identity=27.5303643724696, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633
- InterPro:   IPR018842 [H]

Pfam domain/function: PF00563 EAL; PF10388 YkuI_C [H]

EC number: NA

Molecular weight: Translated: 47688; Mature: 47688

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDALDVMANLSQAIPYYQPIFSADEHGVIGYEVLGRFQTEAGPVSLGPFFHDDTIPEEF
CCCHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHH
RIEVDDVITKKALDYFLSLPDQTLLIFLNRDANLLMLDRGESFLQLLLAYEAKGLALSRI
EEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHCCCHHHHHH
VLEINEQHFKGDLDQFSHLLTYIRTYGIKVAVDNIAEHSIHLERIGVLSPDILKIDLHEL
HHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEHHHH
RKTSVHQAYQEIVHSISLLARKIGATLLYEDIETSFQLQYAWRHGGRYYQGYYLAKPAPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCEEEEEEEECCCCHH
VVPRDLLKELLRQECHRFIQQEKKKLETLYQISEQFQQRVAALLGKYKKVSSFNELISLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADELNDVCFRIYVCDEDGFQQSGNMFKRGSRWELQQQYYMKNWSWRPYFLENIIRMRSRR
HHHHHCEEEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RGILSDLYTDIETGETIRTYSYPIDEHHYLFIDLSYSYLFEHDAHY
CHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECHHHHHCCCCCC
>Mature Secondary Structure
MMDALDVMANLSQAIPYYQPIFSADEHGVIGYEVLGRFQTEAGPVSLGPFFHDDTIPEEF
CCCHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCHHH
RIEVDDVITKKALDYFLSLPDQTLLIFLNRDANLLMLDRGESFLQLLLAYEAKGLALSRI
EEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHCCCHHHHHH
VLEINEQHFKGDLDQFSHLLTYIRTYGIKVAVDNIAEHSIHLERIGVLSPDILKIDLHEL
HHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEHHHH
RKTSVHQAYQEIVHSISLLARKIGATLLYEDIETSFQLQYAWRHGGRYYQGYYLAKPAPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCEEEEEEEECCCCHH
VVPRDLLKELLRQECHRFIQQEKKKLETLYQISEQFQQRVAALLGKYKKVSSFNELISLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADELNDVCFRIYVCDEDGFQQSGNMFKRGSRWELQQQYYMKNWSWRPYFLENIIRMRSRR
HHHHHCEEEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
RGILSDLYTDIETGETIRTYSYPIDEHHYLFIDLSYSYLFEHDAHY
CHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]