| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is fadH [H]
Identifier: 138894574
GI number: 138894574
Start: 980479
End: 981246
Strand: Direct
Name: fadH [H]
Synonym: GTNG_0904
Alternate gene names: 138894574
Gene position: 980479-981246 (Clockwise)
Preceding gene: 138894571
Following gene: 138894575
Centisome position: 27.62
GC content: 55.08
Gene sequence:
>768_bases ATGAACGGAAAAGTGATTATTATTACCGGTGGATCGAGCGGAATGGGGAAATATATGGCGAAGCGGTTTGTTGCCGAAGG GGCAAACGTCGTTATTACCGGACGACGGGCGGAGGCGCTTGAAGAGGCCAAACAGGAAATGGTCGTACCAGGCGGGGGAC AGGTGCTCACTGTTCCGATGGATGTGCGCAACCCGGAGCAAGTCGCAGACATGGTCAAACGGGCTGACGCGGAGTTTGGC CGCATCGATGCTCTAGTCAACAACGCGGCTGGCAATTTTATTTGCCCGGCGGAAAAGCTATCGATCAACGGTTGGAACAG CGTCATTAATATCGTATTGAACGGTACGTTTTACTGTAGCCGGGAAGTCGGCAACTATTGGATTCAACGTGGCTTAAAAG GGAATATCGTTAACATCATTGCCACATACGCCTGGCATGCCGGTGCGGGGGTCATCCATTCAGCAAGCGCCAAGGCCGGG GTGCTGGCGATGACGCGTACATTGGCGGTTGAGTGGGGGAAAAAATATGGCTTCCGCGTCAACGCTATCGCTCCAGGACC GATTGAGCGGACAGGTGGGGCGGAGCGTCTTTGGGAATCAGAAGAGGCGGAGCGGATGACGATCGACAGCGTGCCGCTCG GGCGGCTCGGAACACCAGAAGAGATTGCAGCGGTTGCGGCGTTTTTACTTTCAGATGAAGCCGCTTACATCAACGGTGCC TGCATCACGGTTGACGGCGGTCAATGGCTGAATCGGCGACCGTTTTAA
Upstream 100 bases:
>100_bases TTCTATCGAAAAGAGGGGGAAATTGCCCTATGCTAGAAAAAGAAAGAAAACCAAGCATAAGAAAAAATGAATGAACCATC AGTCATAGGGGGAGAAGTGA
Downstream 100 bases:
>100_bases CGAACGTGCTAGTGAAAAAATCACTGTCCTTTCTTTATTCAGCGATCCTCAATCGCTACGAAGGACAAGGTTCATAAGGT TTCTCCATTTAGCAAATGTC
Product: short chain dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MNGKVIIITGGSSGMGKYMAKRFVAEGANVVITGRRAEALEEAKQEMVVPGGGQVLTVPMDVRNPEQVADMVKRADAEFG RIDALVNNAAGNFICPAEKLSINGWNSVINIVLNGTFYCSREVGNYWIQRGLKGNIVNIIATYAWHAGAGVIHSASAKAG VLAMTRTLAVEWGKKYGFRVNAIAPGPIERTGGAERLWESEEAERMTIDSVPLGRLGTPEEIAAVAAFLLSDEAAYINGA CITVDGGQWLNRRPF
Sequences:
>Translated_255_residues MNGKVIIITGGSSGMGKYMAKRFVAEGANVVITGRRAEALEEAKQEMVVPGGGQVLTVPMDVRNPEQVADMVKRADAEFG RIDALVNNAAGNFICPAEKLSINGWNSVINIVLNGTFYCSREVGNYWIQRGLKGNIVNIIATYAWHAGAGVIHSASAKAG VLAMTRTLAVEWGKKYGFRVNAIAPGPIERTGGAERLWESEEAERMTIDSVPLGRLGTPEEIAAVAAFLLSDEAAYINGA CITVDGGQWLNRRPF >Mature_255_residues MNGKVIIITGGSSGMGKYMAKRFVAEGANVVITGRRAEALEEAKQEMVVPGGGQVLTVPMDVRNPEQVADMVKRADAEFG RIDALVNNAAGNFICPAEKLSINGWNSVINIVLNGTFYCSREVGNYWIQRGLKGNIVNIIATYAWHAGAGVIHSASAKAG VLAMTRTLAVEWGKKYGFRVNAIAPGPIERTGGAERLWESEEAERMTIDSVPLGRLGTPEEIAAVAAFLLSDEAAYINGA CITVDGGQWLNRRPF
Specific function: Auxiliary enzyme of beta-oxidation. It participates in the metabolism of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3- enoyl-CoA
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. 2,4-dienoyl-CoA reductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI10190704, Length=251, Percent_Identity=43.0278884462151, Blast_Score=181, Evalue=5e-46, Organism=Homo sapiens, GI4503301, Length=248, Percent_Identity=43.1451612903226, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI19923817, Length=262, Percent_Identity=38.1679389312977, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=28.4615384615385, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=30.2040816326531, Blast_Score=101, Evalue=7e-22, Organism=Homo sapiens, GI59889578, Length=240, Percent_Identity=33.75, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=26.9076305220884, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=28.3464566929134, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=27.5303643724696, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI66933014, Length=257, Percent_Identity=28.0155642023346, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI4758504, Length=262, Percent_Identity=29.0076335877863, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI126723750, Length=254, Percent_Identity=25.9842519685039, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI83715985, Length=261, Percent_Identity=26.8199233716475, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI31542939, Length=265, Percent_Identity=27.9245283018868, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI4504505, Length=194, Percent_Identity=27.319587628866, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI209862901, Length=128, Percent_Identity=32.8125, Blast_Score=64, Evalue=1e-10, Organism=Homo sapiens, GI19923983, Length=128, Percent_Identity=32.8125, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=34.1269841269841, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=32.6612903225806, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI87082100, Length=262, Percent_Identity=35.4961832061069, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=30.6772908366534, Blast_Score=104, Evalue=7e-24, Organism=Escherichia coli, GI1788459, Length=253, Percent_Identity=29.2490118577075, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787905, Length=253, Percent_Identity=31.2252964426877, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786812, Length=259, Percent_Identity=30.5019305019305, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=28.4, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI1787820, Length=238, Percent_Identity=30.2521008403361, Blast_Score=91, Evalue=5e-20, Organism=Escherichia coli, GI2367175, Length=252, Percent_Identity=28.5714285714286, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI2367365, Length=253, Percent_Identity=28.0632411067194, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1789057, Length=263, Percent_Identity=24.3346007604563, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789378, Length=258, Percent_Identity=25.968992248062, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787526, Length=258, Percent_Identity=23.2558139534884, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=43.2539682539683, Blast_Score=194, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17536651, Length=252, Percent_Identity=42.8571428571429, Blast_Score=194, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17561272, Length=251, Percent_Identity=43.8247011952191, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17562910, Length=269, Percent_Identity=32.3420074349442, Blast_Score=117, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=30.9701492537313, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=32.0754716981132, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17560150, Length=263, Percent_Identity=32.6996197718631, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=33.206106870229, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=30.0751879699248, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17562906, Length=266, Percent_Identity=29.3233082706767, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=31.9838056680162, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=31.3725490196078, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=32.6996197718631, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17531453, Length=269, Percent_Identity=30.4832713754647, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=33.0798479087452, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=32.319391634981, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=30.3030303030303, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17563726, Length=265, Percent_Identity=32.4528301886792, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17538480, Length=267, Percent_Identity=30.7116104868914, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=27.6679841897233, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=28.8537549407115, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71994604, Length=252, Percent_Identity=28.5714285714286, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI25147288, Length=252, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=30.9433962264151, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17544670, Length=269, Percent_Identity=27.1375464684015, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=30.4182509505703, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=26.8292682926829, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17538182, Length=259, Percent_Identity=27.7992277992278, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=27.8350515463918, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71982365, Length=143, Percent_Identity=29.3706293706294, Blast_Score=68, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=35.546875, Blast_Score=144, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6322861, Length=247, Percent_Identity=28.3400809716599, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=34.4, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=33.7301587301587, Blast_Score=118, Evalue=4e-27, Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=34, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=29.6875, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI23397609, Length=260, Percent_Identity=32.6923076923077, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=32.1428571428571, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24643142, Length=248, Percent_Identity=25.4032258064516, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24644337, Length=255, Percent_Identity=28.2352941176471, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=29.5275590551181, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI21357673, Length=213, Percent_Identity=28.169014084507, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24580925, Length=194, Percent_Identity=27.8350515463918, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648693, Length=193, Percent_Identity=26.9430051813472, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI21355889, Length=193, Percent_Identity=26.9430051813472, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.34 [H]
Molecular weight: Translated: 27326; Mature: 27326
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGKVIIITGGSSGMGKYMAKRFVAEGANVVITGRRAEALEEAKQEMVVPGGGQVLTVPM CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHEECCCCCEEEEEEE DVRNPEQVADMVKRADAEFGRIDALVNNAAGNFICPAEKLSINGWNSVINIVLNGTFYCS CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEECCHHHEECCCHHHEEEEEECCEEEEC REVGNYWIQRGLKGNIVNIIATYAWHAGAGVIHSASAKAGVLAMTRTLAVEWGKKYGFRV HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEE NAIAPGPIERTGGAERLWESEEAERMTIDSVPLGRLGTPEEIAAVAAFLLSDEAAYINGA EEECCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEECCE CITVDGGQWLNRRPF EEEECCCCCCCCCCC >Mature Secondary Structure MNGKVIIITGGSSGMGKYMAKRFVAEGANVVITGRRAEALEEAKQEMVVPGGGQVLTVPM CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHEECCCCCEEEEEEE DVRNPEQVADMVKRADAEFGRIDALVNNAAGNFICPAEKLSINGWNSVINIVLNGTFYCS CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEECCHHHEECCCHHHEEEEEECCEEEEC REVGNYWIQRGLKGNIVNIIATYAWHAGAGVIHSASAKAGVLAMTRTLAVEWGKKYGFRV HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEE NAIAPGPIERTGGAERLWESEEAERMTIDSVPLGRLGTPEEIAAVAAFLLSDEAAYINGA EEECCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEECCE CITVDGGQWLNRRPF EEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]