| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is yfjQ [H]
Identifier: 138894569
GI number: 138894569
Start: 975051
End: 976043
Strand: Direct
Name: yfjQ [H]
Synonym: GTNG_0899
Alternate gene names: 138894569
Gene position: 975051-976043 (Clockwise)
Preceding gene: 138894566
Following gene: 138894570
Centisome position: 27.46
GC content: 44.61
Gene sequence:
>993_bases ATGGCGATGATTCGCACGTGTGTCGTAACAAAAGAGTTTGAGGTTATGCATGATGTTGATTTAGCGTTCGTCAACAGTCC AGACGTTTCATGGTATTGGGTTGATTTTCATGAACCGACGGACGAGGAGTCGGACTTACTCGCTTCATTTTTCCGTTTCC ATCCGCTAGCGATTGAGGACTGTTTGGAATATGTACAGCGTCCGAAACTTGATTTTTATGACCGCTACTTATTTGTTGTC CTTCATGCGATTGCGGGCACAACCCTCGAGGCTGAGGAAGTTGACTTGTTTGTCGGACAAAATTTTATCGTTTCGTTTCA TAAGTCGTCGATTCACGCAGTCGATGACGTATGGGAGCGGCTGAAACGCGAGCAGGATGTGCAGCAGGGGCCGTTTCATG TTATGTATCGGCTGATTGATAAACTCGTCGATGATTACTTCCCGCCACTGTACAATATTGAAGATGTGTTAAATGATCTA GAGGAAAATACGAACAATGAGCCGATTCATGACATTATCGAAAAAGTGTTTGATATTCGTGGCGATTTATCGAAATTGCG CCGGACAATTGTGCCGATGCGCGATTTATTGTATCGCATCATCCACTCCGACCGACTGCAGCGCATGAAAGAACGGCAGT TGTATTTCCATGATATTTACGATCATTTATTGAAGCTGTCGGAAATGATCGAGACGAATCGGGAAATTACCTCCGATATC CGGGATAGCTATTTGTCGCTCAACTCCAACCGAATGAACAACATTATGATGACATTTACAGCCATTACGACGATTTTTAT GCCGCTCACCTTTATTGCCGGCATTTACGGGATGAATTTTGATTATATGCCGGAACTGCGCTGGAAATATGGGTACTTTG CTGTATTGGCGATCATGGCAGTCATCGGCATAATGATGTTTGCTTGGTTTAAACGCAACGGTTGGTTTCAGCTGTTAAAA GGCGACTCGTCGAAGGAGGAACGGCGTCGGTAA
Upstream 100 bases:
>100_bases TTTTTGTCAATTTTTTCTCTACACGATTTCTTTACCCGTTTTTTGTTGGTGTGTAACAGCTTTTCGGTTATGATAAGAAG AGAAAAAATGGCAAGGTGAG
Downstream 100 bases:
>100_bases CCGTATAAAACAAGCTGGCCCCCTCATATATATAACTATGGCAATGCGACCGTGAAGGAGGGGGAAGGATGGTACGAGGT GTTTGGGGCGTTGATTCGGC
Product: magnesium/cobalt transporter CorA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MAMIRTCVVTKEFEVMHDVDLAFVNSPDVSWYWVDFHEPTDEESDLLASFFRFHPLAIEDCLEYVQRPKLDFYDRYLFVV LHAIAGTTLEAEEVDLFVGQNFIVSFHKSSIHAVDDVWERLKREQDVQQGPFHVMYRLIDKLVDDYFPPLYNIEDVLNDL EENTNNEPIHDIIEKVFDIRGDLSKLRRTIVPMRDLLYRIIHSDRLQRMKERQLYFHDIYDHLLKLSEMIETNREITSDI RDSYLSLNSNRMNNIMMTFTAITTIFMPLTFIAGIYGMNFDYMPELRWKYGYFAVLAIMAVIGIMMFAWFKRNGWFQLLK GDSSKEERRR
Sequences:
>Translated_330_residues MAMIRTCVVTKEFEVMHDVDLAFVNSPDVSWYWVDFHEPTDEESDLLASFFRFHPLAIEDCLEYVQRPKLDFYDRYLFVV LHAIAGTTLEAEEVDLFVGQNFIVSFHKSSIHAVDDVWERLKREQDVQQGPFHVMYRLIDKLVDDYFPPLYNIEDVLNDL EENTNNEPIHDIIEKVFDIRGDLSKLRRTIVPMRDLLYRIIHSDRLQRMKERQLYFHDIYDHLLKLSEMIETNREITSDI RDSYLSLNSNRMNNIMMTFTAITTIFMPLTFIAGIYGMNFDYMPELRWKYGYFAVLAIMAVIGIMMFAWFKRNGWFQLLK GDSSKEERRR >Mature_329_residues AMIRTCVVTKEFEVMHDVDLAFVNSPDVSWYWVDFHEPTDEESDLLASFFRFHPLAIEDCLEYVQRPKLDFYDRYLFVVL HAIAGTTLEAEEVDLFVGQNFIVSFHKSSIHAVDDVWERLKREQDVQQGPFHVMYRLIDKLVDDYFPPLYNIEDVLNDLE ENTNNEPIHDIIEKVFDIRGDLSKLRRTIVPMRDLLYRIIHSDRLQRMKERQLYFHDIYDHLLKLSEMIETNREITSDIR DSYLSLNSNRMNNIMMTFTAITTIFMPLTFIAGIYGMNFDYMPELRWKYGYFAVLAIMAVIGIMMFAWFKRNGWFQLLKG DSSKEERRR
Specific function: Unknown
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=260, Percent_Identity=24.6153846153846, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI2367297, Length=64, Percent_Identity=39.0625, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 39386; Mature: 39255
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMIRTCVVTKEFEVMHDVDLAFVNSPDVSWYWVDFHEPTDEESDLLASFFRFHPLAIED CCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHH CLEYVQRPKLDFYDRYLFVVLHAIAGTTLEAEEVDLFVGQNFIVSFHKSSIHAVDDVWER HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHEEHHHHHHHHHHHHHHH LKREQDVQQGPFHVMYRLIDKLVDDYFPPLYNIEDVLNDLEENTNNEPIHDIIEKVFDIR HHHHCCHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH GDLSKLRRTIVPMRDLLYRIIHSDRLQRMKERQLYFHDIYDHLLKLSEMIETNREITSDI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDSYLSLNSNRMNNIMMTFTAITTIFMPLTFIAGIYGMNFDYMPELRWKYGYFAVLAIMA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH VIGIMMFAWFKRNGWFQLLKGDSSKEERRR HHHHHHHHHHHCCCCEEEECCCCCHHHHCC >Mature Secondary Structure AMIRTCVVTKEFEVMHDVDLAFVNSPDVSWYWVDFHEPTDEESDLLASFFRFHPLAIED CHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHH CLEYVQRPKLDFYDRYLFVVLHAIAGTTLEAEEVDLFVGQNFIVSFHKSSIHAVDDVWER HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHEEHHHHHHHHHHHHHHH LKREQDVQQGPFHVMYRLIDKLVDDYFPPLYNIEDVLNDLEENTNNEPIHDIIEKVFDIR HHHHCCHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH GDLSKLRRTIVPMRDLLYRIIHSDRLQRMKERQLYFHDIYDHLLKLSEMIETNREITSDI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDSYLSLNSNRMNNIMMTFTAITTIFMPLTFIAGIYGMNFDYMPELRWKYGYFAVLAIMA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH VIGIMMFAWFKRNGWFQLLKGDSSKEERRR HHHHHHHHHHHCCCCEEEECCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969503; 9384377 [H]