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The map label for this gene is oppB [H]

Identifier: 138894364

GI number: 138894364

Start: 772255

End: 773184

Strand: Direct

Name: oppB [H]

Synonym: GTNG_0692

Alternate gene names: 138894364

Gene position: 772255-773184 (Clockwise)

Preceding gene: 138894363

Following gene: 138894365

Centisome position: 21.75

GC content: 47.2

Gene sequence:

>930_bases
ATGGCGCGGTATACGATTCAACGGATCGTGTATATGGTGATTACGTTGTTCATTATTGCCACCCTGACGTTCTTTTTAAT
GAAGCTGTTGCCTGGTTCGCCGCTGCAAAACCAGGAAAAATTGACGCCAGAACAGCGGGCGCTCATTTTAAAAGAATATG
GGTTGGATAAGCCAGTGCCTGTGCAGTACGTGCAATATTTAGGCAATTTGTTGCAAGGGGATTTAGGGGTTTCGTTCCAG
TACGACAACCGTCCAGTGACAGAATTGATCGGTGACCGGATCGGCCCATCGGCCCAGCTAGGGTTTCAAGCGATTGTGTT
TGGCACGATTGTCGGATTAGTGCTTGGTATTTTTGCAGCTATTCGTCATAACAGTTGGGAAGACTATACGGCCACGGTCA
TTGCTGTCATCGGAATTTCCGTTCCGTCGTTTGTGTTGGCTGGATTTTTGCAATATTTTATCGGCGTGAAGCTACAGTGG
CTGCCGGTCGCTTTTTGGGAAGGGTTTAAATATACGATCATGCCGACATTGGCGCTATCCGTCGGTGTTATTGCCAACAT
CGCCCGTTTTATGCGGACTGAAATGCTTGAAGTGTTAAGTTCTGATTACATTTTAACGGCTCGGGCAAAAGGGATTAGCA
ATGCCGGGGTTGTGGTTAAGCACGCCATCCGCAATTCGCTTATCCCCGTGATCACCATTCTCGGTCCGATGGCCGTGAAC
TTGATGACAGGGACGCTCGTTATTGAGAAAATTTTTGCGGTTCCAGGGCTTGGTGAGCAGTTTGTTCGTTCCATCGAGTT
GAACGACTATCCGGTCATTATGGGAACGACGTTGTTTTACTCGGCATTATTAATCTTTGTCATTTTTATCGTGGACATCC
TCTATGGAATTGTTGATCCACGCATCCGGTTAGCGGGAGGGAAGAAATAA

Upstream 100 bases:

>100_bases
ACTCTCTTTTTGGCTGTCAAGGCGAAAAATGTCGAAAAAAGCAAAATGTTAAGAGATTATTAACAGTAAAGTTTAGGAAA
TCAATAGGGGAGGTGCAGCC

Downstream 100 bases:

>100_bases
TGGCGAAACAACAATACGATCAGCTTTCACCGGAATGGTTTCAGCCCGCCCCGCCGAACGTCGGCGAACAAGAAAAAATC
AATCGTCCAAGCTTGACGTT

Product: oligopeptide transport system permease OppB

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KB [H]

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MARYTIQRIVYMVITLFIIATLTFFLMKLLPGSPLQNQEKLTPEQRALILKEYGLDKPVPVQYVQYLGNLLQGDLGVSFQ
YDNRPVTELIGDRIGPSAQLGFQAIVFGTIVGLVLGIFAAIRHNSWEDYTATVIAVIGISVPSFVLAGFLQYFIGVKLQW
LPVAFWEGFKYTIMPTLALSVGVIANIARFMRTEMLEVLSSDYILTARAKGISNAGVVVKHAIRNSLIPVITILGPMAVN
LMTGTLVIEKIFAVPGLGEQFVRSIELNDYPVIMGTTLFYSALLIFVIFIVDILYGIVDPRIRLAGGKK

Sequences:

>Translated_309_residues
MARYTIQRIVYMVITLFIIATLTFFLMKLLPGSPLQNQEKLTPEQRALILKEYGLDKPVPVQYVQYLGNLLQGDLGVSFQ
YDNRPVTELIGDRIGPSAQLGFQAIVFGTIVGLVLGIFAAIRHNSWEDYTATVIAVIGISVPSFVLAGFLQYFIGVKLQW
LPVAFWEGFKYTIMPTLALSVGVIANIARFMRTEMLEVLSSDYILTARAKGISNAGVVVKHAIRNSLIPVITILGPMAVN
LMTGTLVIEKIFAVPGLGEQFVRSIELNDYPVIMGTTLFYSALLIFVIFIVDILYGIVDPRIRLAGGKK
>Mature_308_residues
ARYTIQRIVYMVITLFIIATLTFFLMKLLPGSPLQNQEKLTPEQRALILKEYGLDKPVPVQYVQYLGNLLQGDLGVSFQY
DNRPVTELIGDRIGPSAQLGFQAIVFGTIVGLVLGIFAAIRHNSWEDYTATVIAVIGISVPSFVLAGFLQYFIGVKLQWL
PVAFWEGFKYTIMPTLALSVGVIANIARFMRTEMLEVLSSDYILTARAKGISNAGVVVKHAIRNSLIPVITILGPMAVNL
MTGTLVIEKIFAVPGLGEQFVRSIELNDYPVIMGTTLFYSALLIFVIFIVDILYGIVDPRIRLAGGKK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=305, Percent_Identity=40, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI1787053, Length=307, Percent_Identity=40.0651465798046, Blast_Score=229, Evalue=1e-61,
Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=33.8278931750742, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1789888, Length=314, Percent_Identity=32.8025477707006, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1787761, Length=333, Percent_Identity=32.7327327327327, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=26.6483516483516, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=28.2527881040892, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34181; Mature: 34050

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARYTIQRIVYMVITLFIIATLTFFLMKLLPGSPLQNQEKLTPEQRALILKEYGLDKPVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH
VQYVQYLGNLLQGDLGVSFQYDNRPVTELIGDRIGPSAQLGFQAIVFGTIVGLVLGIFAA
HHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IRHNSWEDYTATVIAVIGISVPSFVLAGFLQYFIGVKLQWLPVAFWEGFKYTIMPTLALS
HHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEHHHHCCCHHHHHHHHHHH
VGVIANIARFMRTEMLEVLSSDYILTARAKGISNAGVVVKHAIRNSLIPVITILGPMAVN
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMTGTLVIEKIFAVPGLGEQFVRSIELNDYPVIMGTTLFYSALLIFVIFIVDILYGIVDP
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
RIRLAGGKK
CEEECCCCC
>Mature Secondary Structure 
ARYTIQRIVYMVITLFIIATLTFFLMKLLPGSPLQNQEKLTPEQRALILKEYGLDKPVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCH
VQYVQYLGNLLQGDLGVSFQYDNRPVTELIGDRIGPSAQLGFQAIVFGTIVGLVLGIFAA
HHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IRHNSWEDYTATVIAVIGISVPSFVLAGFLQYFIGVKLQWLPVAFWEGFKYTIMPTLALS
HHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEHHHHCCCHHHHHHHHHHH
VGVIANIARFMRTEMLEVLSSDYILTARAKGISNAGVVVKHAIRNSLIPVITILGPMAVN
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMTGTLVIEKIFAVPGLGEQFVRSIELNDYPVIMGTTLFYSALLIFVIFIVDILYGIVDP
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
RIRLAGGKK
CEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]