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The map label for this gene is gerpC [H]

Identifier: 138894269

GI number: 138894269

Start: 662144

End: 662740

Strand: Reverse

Name: gerpC [H]

Synonym: GTNG_0595

Alternate gene names: 138894269

Gene position: 662740-662144 (Counterclockwise)

Preceding gene: 138894270

Following gene: 138894268

Centisome position: 18.67

GC content: 47.24

Gene sequence:

>597_bases
ATGAGTTTATACGAGTATTTCGTCAAGCTACACCGCTATTTATCATGGCAAACCAAAAAAATACGGGTGCTTGAACGACG
CCTTCGTATTCTCGAAGCCCAGCTTCAGGAAATCGAGGCCCAGCCGCGCACATCGATCGAACGGATTGAATATAAATTTG
ATCAACTCAAAATCGAGACGCTTGAAGGGACGCTAAACATCGGAATCACCCCTCCAGGAACCGGGGAAACAATTGAAGAC
TTTGCCGTTGACCCAGAAAAAACAGTGATTTCGAAGCCGGAACCCGTGCTGATGCGCCCCATTCAAGAAAAAGTGGCCTC
CTACCTCAACAAGGAAGCACCGGAAACGCTAAAACAGCTTGAACGCCAATACGGCCGCAGCCTTGACGATACGTACCGGC
AATTTATTTTGCAAGACATTGCCCGGCAAACGGACGAACGCATTCGTTTTTATTTGCAGGAGAAAGCGAACAATGGTTAT
GTTCCGCCAGGTGACCGCGATGAGACGGTCGAAAATGAAATTTTTCAAAAAGTGAAAGCTGACATCGAACAATCGCTTGA
TGCGTTTCTCAAACATTTGCCTTCTGGGGGGGGATAA

Upstream 100 bases:

>100_bases
ATTCGGCCAATCTCTAAACTCAACAGAAAAGAGTGATGAGAACCAGGGGACGTCCATATACTGAAGTAAGAGGGCTCTTA
GGAGAGGATGGGAGTGCACG

Downstream 100 bases:

>100_bases
ACGTGAATTACACCGTCATCAACCGCGATGTGCACGTCAGCGATATCCATCTTGTGGCGGTCGCCAGCGCCTCACTGTTT
TTAATCGGCGACGCCGATGT

Product: spore germination protein GerPC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSLYEYFVKLHRYLSWQTKKIRVLERRLRILEAQLQEIEAQPRTSIERIEYKFDQLKIETLEGTLNIGITPPGTGETIED
FAVDPEKTVISKPEPVLMRPIQEKVASYLNKEAPETLKQLERQYGRSLDDTYRQFILQDIARQTDERIRFYLQEKANNGY
VPPGDRDETVENEIFQKVKADIEQSLDAFLKHLPSGGG

Sequences:

>Translated_198_residues
MSLYEYFVKLHRYLSWQTKKIRVLERRLRILEAQLQEIEAQPRTSIERIEYKFDQLKIETLEGTLNIGITPPGTGETIED
FAVDPEKTVISKPEPVLMRPIQEKVASYLNKEAPETLKQLERQYGRSLDDTYRQFILQDIARQTDERIRFYLQEKANNGY
VPPGDRDETVENEIFQKVKADIEQSLDAFLKHLPSGGG
>Mature_197_residues
SLYEYFVKLHRYLSWQTKKIRVLERRLRILEAQLQEIEAQPRTSIERIEYKFDQLKIETLEGTLNIGITPPGTGETIEDF
AVDPEKTVISKPEPVLMRPIQEKVASYLNKEAPETLKQLERQYGRSLDDTYRQFILQDIARQTDERIRFYLQEKANNGYV
PPGDRDETVENEIFQKVKADIEQSLDAFLKHLPSGGG

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019673 [H]

Pfam domain/function: PF10737 GerPC [H]

EC number: NA

Molecular weight: Translated: 23132; Mature: 23000

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLYEYFVKLHRYLSWQTKKIRVLERRLRILEAQLQEIEAQPRTSIERIEYKFDQLKIET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHE
LEGTLNIGITPPGTGETIEDFAVDPEKTVISKPEPVLMRPIQEKVASYLNKEAPETLKQL
ECCEEEECCCCCCCCCCHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
ERQYGRSLDDTYRQFILQDIARQTDERIRFYLQEKANNGYVPPGDRDETVENEIFQKVKA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
DIEQSLDAFLKHLPSGGG
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLYEYFVKLHRYLSWQTKKIRVLERRLRILEAQLQEIEAQPRTSIERIEYKFDQLKIET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHE
LEGTLNIGITPPGTGETIEDFAVDPEKTVISKPEPVLMRPIQEKVASYLNKEAPETLKQL
ECCEEEECCCCCCCCCCHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
ERQYGRSLDDTYRQFILQDIARQTDERIRFYLQEKANNGYVPPGDRDETVENEIFQKVKA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
DIEQSLDAFLKHLPSGGG
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 10715007 [H]