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The map label for this gene is gerpB [H]

Identifier: 138894270

GI number: 138894270

Start: 662824

End: 663048

Strand: Reverse

Name: gerpB [H]

Synonym: GTNG_0596

Alternate gene names: 138894270

Gene position: 663048-662824 (Counterclockwise)

Preceding gene: 138894271

Following gene: 138894269

Centisome position: 18.68

GC content: 53.78

Gene sequence:

>225_bases
TTGAATTTTTATATCAGCCAAAGCATTTGCATTCATCAATTGCGGATCGGTTCGGTGACAAACTCATCCGTTTTGCAAAT
TGGCAGTGCTGGCAGCATTCAGGCACTGTCGACGCTCTCCAACACCGGTGGATTCACCGGTCCAGCCCCGCAAGCGACTG
TACCGCTCGGTCCGCAAGCGCAACCGGTCGGCCCTCTCGTTCCTCTCCATTCGGCCAATCTCTAA

Upstream 100 bases:

>100_bases
CGGGCTTTATATCTATAACTATTACAGCAATACGAACACGAATGACGCTGATGTTGCCGACGAAAATGTCGTTGGCAACG
TATAGAGGAGGGGAAGGAGG

Downstream 100 bases:

>100_bases
ACTCAACAGAAAAGAGTGATGAGAACCAGGGGACGTCCATATACTGAAGTAAGAGGGCTCTTAGGAGAGGATGGGAGTGC
ACGATGAGTTTATACGAGTA

Product: spore germination protein GerPB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MNFYISQSICIHQLRIGSVTNSSVLQIGSAGSIQALSTLSNTGGFTGPAPQATVPLGPQAQPVGPLVPLHSANL

Sequences:

>Translated_74_residues
MNFYISQSICIHQLRIGSVTNSSVLQIGSAGSIQALSTLSNTGGFTGPAPQATVPLGPQAQPVGPLVPLHSANL
>Mature_74_residues
MNFYISQSICIHQLRIGSVTNSSVLQIGSAGSIQALSTLSNTGGFTGPAPQATVPLGPQAQPVGPLVPLHSANL

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7513; Mature: 7513

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFYISQSICIHQLRIGSVTNSSVLQIGSAGSIQALSTLSNTGGFTGPAPQATVPLGPQA
CCEECCCCEEEEEEECCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
QPVGPLVPLHSANL
CCCCCCCCCCCCCC
>Mature Secondary Structure
MNFYISQSICIHQLRIGSVTNSSVLQIGSAGSIQALSTLSNTGGFTGPAPQATVPLGPQA
CCEECCCCEEEEEEECCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
QPVGPLVPLHSANL
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 10715007 [H]