| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is ytbE [H]
Identifier: 138894179
GI number: 138894179
Start: 569294
End: 570121
Strand: Direct
Name: ytbE [H]
Synonym: GTNG_0505
Alternate gene names: 138894179
Gene position: 569294-570121 (Clockwise)
Preceding gene: 138894178
Following gene: 138894180
Centisome position: 16.04
GC content: 46.26
Gene sequence:
>828_bases GTGAATAGTTTGCAAGATTGCACTGTATTACATAACGGTGTGAAAATGCCGTGGGTCGGTCTTGGTGTTTACAAAGTAAA AGAGGGAGAGGAAGTAAAAGGAGCGGTGCGTACCGCATTGGAGGTAGGATATCGCCATATTGATACGGCCGCTTTTTATG AAAACGAGGAAGGGGTCGGACAAGCGATCCGCGAATCGGGTATTCCGCGCGAGCAAGTGTTTGTGACAACGAAAGTATGG AATACGGACCAAGGATATGAAACGACGCTCAAAGCGTTTAATACAAGCTTGAAAAAGCTCGGCTTTGATTACGTTGACTT GTACTTAGTCCACTGGCCGGTGAAAGGGAAATATAAAGAAACGTACAAGGCGCTTGAAAAGCTGTATAAAGACGGCTATG TGCGCGCGATTGGTGTAAGCAACTTCCAAATTCACCATTTGCAAGATGTACTAGCCGATTGTGAAATTAAGCCTATGGTC AACCAAGTCGAGTATCATCCGCGCCTAACGCAAAAAGAGCTGCATGCGTTCTGTCGAGAAAACGGCATCCAGCTTGAGGC ATGGTCGCCGCTTATGCGCGGGGAAATTTTAAACGAACCAACAATCGTTGAGATTGGGAAAAAATACGGAAAAACACCGG CGCAAGTCGTGCTGCGTTGGGATTTGCAAAACGGTGTCGTGACGATTCCGAAATCGGTGACGCCGGCGCGCATTAAAGAA AACGCTACTATTTTCGACTTTTCGCTGACAGATGAGGAAATGAGACAAATCGATGCGTTAAACTTGAACAAGCGGATTGG AGCCGATCCGGACAATTTCAATTTTTGA
Upstream 100 bases:
>100_bases TTTGAATCAAAATCCAAACGGCACCTTTGGGCATATATTTTGCTTTTTCTTGGCTGTTTTCCCATAATAAAACTATATAG ATGTTGAAGGGGGAAGTAGA
Downstream 100 bases:
>100_bases TGAATGGATCGGTTAAACAGCGCCCATCGTCGGCGCTGTTTTTTCTAGAGATATGATGAAACCAAAGCGGTATGTTTGAC GTATGAAACAATGAACAAGT
Product: aldo/keto reductase family oxidoreductase
Products: 2-keto-L-gulonate; NADP [C]
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MNSLQDCTVLHNGVKMPWVGLGVYKVKEGEEVKGAVRTALEVGYRHIDTAAFYENEEGVGQAIRESGIPREQVFVTTKVW NTDQGYETTLKAFNTSLKKLGFDYVDLYLVHWPVKGKYKETYKALEKLYKDGYVRAIGVSNFQIHHLQDVLADCEIKPMV NQVEYHPRLTQKELHAFCRENGIQLEAWSPLMRGEILNEPTIVEIGKKYGKTPAQVVLRWDLQNGVVTIPKSVTPARIKE NATIFDFSLTDEEMRQIDALNLNKRIGADPDNFNF
Sequences:
>Translated_275_residues MNSLQDCTVLHNGVKMPWVGLGVYKVKEGEEVKGAVRTALEVGYRHIDTAAFYENEEGVGQAIRESGIPREQVFVTTKVW NTDQGYETTLKAFNTSLKKLGFDYVDLYLVHWPVKGKYKETYKALEKLYKDGYVRAIGVSNFQIHHLQDVLADCEIKPMV NQVEYHPRLTQKELHAFCRENGIQLEAWSPLMRGEILNEPTIVEIGKKYGKTPAQVVLRWDLQNGVVTIPKSVTPARIKE NATIFDFSLTDEEMRQIDALNLNKRIGADPDNFNF >Mature_275_residues MNSLQDCTVLHNGVKMPWVGLGVYKVKEGEEVKGAVRTALEVGYRHIDTAAFYENEEGVGQAIRESGIPREQVFVTTKVW NTDQGYETTLKAFNTSLKKLGFDYVDLYLVHWPVKGKYKETYKALEKLYKDGYVRAIGVSNFQIHHLQDVLADCEIKPMV NQVEYHPRLTQKELHAFCRENGIQLEAWSPLMRGEILNEPTIVEIGKKYGKTPAQVVLRWDLQNGVVTIPKSVTPARIKE NATIFDFSLTDEEMRQIDALNLNKRIGADPDNFNF
Specific function: Reduction [C]
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase family [H]
Homologues:
Organism=Homo sapiens, GI24497577, Length=295, Percent_Identity=42.7118644067797, Blast_Score=251, Evalue=6e-67, Organism=Homo sapiens, GI5174391, Length=295, Percent_Identity=42.7118644067797, Blast_Score=251, Evalue=6e-67, Organism=Homo sapiens, GI223468663, Length=292, Percent_Identity=40.7534246575342, Blast_Score=207, Evalue=6e-54, Organism=Homo sapiens, GI310109922, Length=299, Percent_Identity=40.4682274247492, Blast_Score=205, Evalue=4e-53, Organism=Homo sapiens, GI310109920, Length=319, Percent_Identity=38.5579937304075, Blast_Score=200, Evalue=1e-51, Organism=Homo sapiens, GI5453543, Length=319, Percent_Identity=38.5579937304075, Blast_Score=199, Evalue=2e-51, Organism=Homo sapiens, GI45446745, Length=319, Percent_Identity=38.5579937304075, Blast_Score=198, Evalue=4e-51, Organism=Homo sapiens, GI4503285, Length=319, Percent_Identity=38.5579937304075, Blast_Score=198, Evalue=4e-51, Organism=Homo sapiens, GI93277124, Length=304, Percent_Identity=36.1842105263158, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI291291012, Length=271, Percent_Identity=40.2214022140221, Blast_Score=192, Evalue=3e-49, Organism=Homo sapiens, GI24497583, Length=302, Percent_Identity=36.7549668874172, Blast_Score=187, Evalue=9e-48, Organism=Homo sapiens, GI5174695, Length=298, Percent_Identity=38.5906040268456, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI24497585, Length=295, Percent_Identity=37.2881355932203, Blast_Score=182, Evalue=3e-46, Organism=Homo sapiens, GI4502049, Length=296, Percent_Identity=39.1891891891892, Blast_Score=178, Evalue=5e-45, Organism=Homo sapiens, GI300116271, Length=276, Percent_Identity=37.3188405797101, Blast_Score=160, Evalue=9e-40, Organism=Homo sapiens, GI300116273, Length=273, Percent_Identity=36.2637362637363, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI310109924, Length=169, Percent_Identity=39.6449704142012, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI310109926, Length=123, Percent_Identity=43.0894308943089, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI207028673, Length=123, Percent_Identity=43.0894308943089, Blast_Score=98, Evalue=7e-21, Organism=Escherichia coli, GI87082198, Length=268, Percent_Identity=48.8805970149254, Blast_Score=270, Evalue=8e-74, Organism=Escherichia coli, GI1786400, Length=257, Percent_Identity=36.5758754863813, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI1788081, Length=265, Percent_Identity=32.4528301886792, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1788070, Length=312, Percent_Identity=27.2435897435897, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1787674, Length=266, Percent_Identity=25.9398496240602, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87081735, Length=276, Percent_Identity=26.8115942028986, Blast_Score=79, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71998625, Length=275, Percent_Identity=40, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17564128, Length=300, Percent_Identity=38, Blast_Score=204, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17537077, Length=292, Percent_Identity=41.0958904109589, Blast_Score=202, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17537075, Length=296, Percent_Identity=39.8648648648649, Blast_Score=195, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17538386, Length=273, Percent_Identity=39.1941391941392, Blast_Score=187, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17561298, Length=270, Percent_Identity=37.4074074074074, Blast_Score=187, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17562292, Length=276, Percent_Identity=34.7826086956522, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17566692, Length=294, Percent_Identity=35.0340136054422, Blast_Score=171, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17537079, Length=303, Percent_Identity=33.993399339934, Blast_Score=168, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17550248, Length=300, Percent_Identity=34, Blast_Score=166, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17552492, Length=273, Percent_Identity=30.03663003663, Blast_Score=160, Evalue=6e-40, Organism=Caenorhabditis elegans, GI17561300, Length=274, Percent_Identity=34.6715328467153, Blast_Score=149, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6324694, Length=286, Percent_Identity=44.7552447552448, Blast_Score=226, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6320576, Length=284, Percent_Identity=39.0845070422535, Blast_Score=207, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6319625, Length=288, Percent_Identity=39.5833333333333, Blast_Score=188, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6322556, Length=260, Percent_Identity=35.3846153846154, Blast_Score=179, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6321896, Length=320, Percent_Identity=35.3125, Blast_Score=174, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6320079, Length=289, Percent_Identity=34.6020761245675, Blast_Score=152, Evalue=4e-38, Organism=Drosophila melanogaster, GI24663317, Length=290, Percent_Identity=44.4827586206897, Blast_Score=229, Evalue=1e-60, Organism=Drosophila melanogaster, GI24657054, Length=291, Percent_Identity=41.5807560137457, Blast_Score=207, Evalue=8e-54, Organism=Drosophila melanogaster, GI45553081, Length=289, Percent_Identity=39.4463667820069, Blast_Score=200, Evalue=7e-52, Organism=Drosophila melanogaster, GI20129731, Length=293, Percent_Identity=39.2491467576792, Blast_Score=197, Evalue=9e-51, Organism=Drosophila melanogaster, GI24644950, Length=302, Percent_Identity=37.7483443708609, Blast_Score=196, Evalue=1e-50, Organism=Drosophila melanogaster, GI21356425, Length=289, Percent_Identity=39.1003460207612, Blast_Score=194, Evalue=5e-50, Organism=Drosophila melanogaster, GI24662789, Length=295, Percent_Identity=36.271186440678, Blast_Score=192, Evalue=2e-49, Organism=Drosophila melanogaster, GI221378297, Length=322, Percent_Identity=35.4037267080745, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI281366140, Length=257, Percent_Identity=38.5214007782101, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI24662781, Length=291, Percent_Identity=38.8316151202749, Blast_Score=164, Evalue=7e-41, Organism=Drosophila melanogaster, GI24662785, Length=292, Percent_Identity=38.6986301369863, Blast_Score=163, Evalue=9e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 31381; Mature: 31381
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00798 ALDOKETO_REDUCTASE_1 ; PS00062 ALDOKETO_REDUCTASE_2 ; PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLQDCTVLHNGVKMPWVGLGVYKVKEGEEVKGAVRTALEVGYRHIDTAAFYENEEGVG CCCHHHHHHHHCCCCCCEEECEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH QAIRESGIPREQVFVTTKVWNTDQGYETTLKAFNTSLKKLGFDYVDLYLVHWPVKGKYKE HHHHHCCCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHH TYKALEKLYKDGYVRAIGVSNFQIHHLQDVLADCEIKPMVNQVEYHPRLTQKELHAFCRE HHHHHHHHHHCCCEEEEECCCEEHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHH NGIQLEAWSPLMRGEILNEPTIVEIGKKYGKTPAQVVLRWDLQNGVVTIPKSVTPARIKE CCCEEEECCCHHHHHHCCCCHHEEHHHHHCCCHHHEEEEEECCCCEEECCCCCCCHHHCC NATIFDFSLTDEEMRQIDALNLNKRIGADPDNFNF CCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNSLQDCTVLHNGVKMPWVGLGVYKVKEGEEVKGAVRTALEVGYRHIDTAAFYENEEGVG CCCHHHHHHHHCCCCCCEEECEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH QAIRESGIPREQVFVTTKVWNTDQGYETTLKAFNTSLKKLGFDYVDLYLVHWPVKGKYKE HHHHHCCCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHH TYKALEKLYKDGYVRAIGVSNFQIHHLQDVLADCEIKPMVNQVEYHPRLTQKELHAFCRE HHHHHHHHHHCCCEEEEECCCEEHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHH NGIQLEAWSPLMRGEILNEPTIVEIGKKYGKTPAQVVLRWDLQNGVVTIPKSVTPARIKE CCCEEEECCCHHHHHHCCCCHHEEHHHHHCCCHHHEEEEEECCCCEEECCCCCCCHHHCC NATIFDFSLTDEEMRQIDALNLNKRIGADPDNFNF CCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2,5-diketo-D-gluconate; NADPH [C]
Specific reaction: 2,5-diketo-D-gluconate + NADPH = 2-keto-L-gulonate + NADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]