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The map label for this gene is yhbA [H]

Identifier: 138894168

GI number: 138894168

Start: 555877

End: 557019

Strand: Direct

Name: yhbA [H]

Synonym: GTNG_0494

Alternate gene names: 138894168

Gene position: 555877-557019 (Clockwise)

Preceding gene: 138894166

Following gene: 138894169

Centisome position: 15.66

GC content: 51.18

Gene sequence:

>1143_bases
ATGGACATTGTCTCTTTGAAACAGGAAGTGATTGAATACAGCCGGTCGATCGGCATCGATAAAATCGGTTTTGCAAGCGC
TGATCCGTTTGTGGAACTAAAGGAGCGGCTTCGTCGGCAACAGGAGCTTGGCTATCAATCCGGATTTGAGGAACCGGATA
TTGAAAAGCGGACAAATCCGTCGTTGCTTCTTCCCGAGGCGAAATCGATCATTGCCATTGCGCTTGCCTATCCATCAAAA
ATGAAAGATGCTCCACGCGGGACGAAAAATGAGCGGCGTGGCCTTTTTTGTCGTGCATCGTGGGGAAAAGACTATCATGA
TGTGTTGCGGGAACGTTTACGCCAACTTGAAGAATTTTTACTTGCGAAGGTACCACATGCCCGTGTTCGTTCGATGGTGG
ATACGGGAGAACTCGCTGACCGGGCCGTGGCAGAGCGGGCAGGGATCGGTTGGAGTGGGAAAAACTGTTCCATTATTACG
CCGGAGTTTGGTTCGTACGTGTATTTGGGTGAGATGATTACAACGATTCCGTTTCCGCCCGATGAACCGATCGAAAACCG
GTGCGGCACATGTACGAAATGCATCGATGCGTGCCCCACAGGGGCGCTCGTGCAAGGGGGACAACTGAATGCGCAGCGGT
GCATCTCATTTTTGACGCAAACGAAAGGCTTTTTAGCCGATGAATTTCGTGAGAAAATCGGCAATCGGTTGTACGGCTGC
GATACGTGCCAGTTGGTCTGCCCGGAAAACAAGAAGAAAGATTTCCACTTGCATCCGGAATTCGAGCCGGATCCCGAGGC
AGCGAAACCGAAGCTCATCCCGCTTCTTCAGGTAAGCAATCGTGAGTTTAAAGAGAAATTCGGCGCAATGGCAGGCTCAT
GGCGCGGGAAAAAACCGATCCAGCGCAACGCCATTTTGGCGCTCGCCCATTATAAAGACCGGACAGCTGTTCCGCATTTA
TTGCGGCTGCTGAAAGAAGACAGCCGTCCCGTCATCCGTGGGACAGCAGCGTGGGCGCTAGGGAAAATCGGGGATGTAAG
TGCCAAGCCATATCTCGAAGAGGCAAGACAAACGGAAACAGATTCAGATGTAGTCGCCGAAATCGAAAAAGGGTTGAAAC
TGTTGACAGAGGTAAAGGAATAG

Upstream 100 bases:

>100_bases
GCCCGAAGGAAGACGTTGTTTTAATTCTTCTGATATGATGCATTTCATATGAATCACCCCGTGTTTCATTTTACCATATA
CCTCGAAGGGAGGGAAAATA

Downstream 100 bases:

>100_bases
GGAAAAAACTGCCGCTTCCTCACATAAGGTAGTAACAAAAACGAAAGTGGGGAGCGGCATGAAAAAGCGGCTGCATGATT
GGCTCGATAAGCGGGCGCAC

Product: Iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MDIVSLKQEVIEYSRSIGIDKIGFASADPFVELKERLRRQQELGYQSGFEEPDIEKRTNPSLLLPEAKSIIAIALAYPSK
MKDAPRGTKNERRGLFCRASWGKDYHDVLRERLRQLEEFLLAKVPHARVRSMVDTGELADRAVAERAGIGWSGKNCSIIT
PEFGSYVYLGEMITTIPFPPDEPIENRCGTCTKCIDACPTGALVQGGQLNAQRCISFLTQTKGFLADEFREKIGNRLYGC
DTCQLVCPENKKKDFHLHPEFEPDPEAAKPKLIPLLQVSNREFKEKFGAMAGSWRGKKPIQRNAILALAHYKDRTAVPHL
LRLLKEDSRPVIRGTAAWALGKIGDVSAKPYLEEARQTETDSDVVAEIEKGLKLLTEVKE

Sequences:

>Translated_380_residues
MDIVSLKQEVIEYSRSIGIDKIGFASADPFVELKERLRRQQELGYQSGFEEPDIEKRTNPSLLLPEAKSIIAIALAYPSK
MKDAPRGTKNERRGLFCRASWGKDYHDVLRERLRQLEEFLLAKVPHARVRSMVDTGELADRAVAERAGIGWSGKNCSIIT
PEFGSYVYLGEMITTIPFPPDEPIENRCGTCTKCIDACPTGALVQGGQLNAQRCISFLTQTKGFLADEFREKIGNRLYGC
DTCQLVCPENKKKDFHLHPEFEPDPEAAKPKLIPLLQVSNREFKEKFGAMAGSWRGKKPIQRNAILALAHYKDRTAVPHL
LRLLKEDSRPVIRGTAAWALGKIGDVSAKPYLEEARQTETDSDVVAEIEKGLKLLTEVKE
>Mature_380_residues
MDIVSLKQEVIEYSRSIGIDKIGFASADPFVELKERLRRQQELGYQSGFEEPDIEKRTNPSLLLPEAKSIIAIALAYPSK
MKDAPRGTKNERRGLFCRASWGKDYHDVLRERLRQLEEFLLAKVPHARVRSMVDTGELADRAVAERAGIGWSGKNCSIIT
PEFGSYVYLGEMITTIPFPPDEPIENRCGTCTKCIDACPTGALVQGGQLNAQRCISFLTQTKGFLADEFREKIGNRLYGC
DTCQLVCPENKKKDFHLHPEFEPDPEAAKPKLIPLLQVSNREFKEKFGAMAGSWRGKKPIQRNAILALAHYKDRTAVPHL
LRLLKEDSRPVIRGTAAWALGKIGDVSAKPYLEEARQTETDSDVVAEIEKGLKLLTEVKE

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=376, Percent_Identity=31.1170212765957, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 42643; Mature: 42643

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIVSLKQEVIEYSRSIGIDKIGFASADPFVELKERLRRQQELGYQSGFEEPDIEKRTNP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCC
SLLLPEAKSIIAIALAYPSKMKDAPRGTKNERRGLFCRASWGKDYHDVLRERLRQLEEFL
CEECCCCHHHEEEEECCCHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
LAKVPHARVRSMVDTGELADRAVAERAGIGWSGKNCSIITPEFGSYVYLGEMITTIPFPP
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEHHHHHHHCCCCC
DEPIENRCGTCTKCIDACPTGALVQGGQLNAQRCISFLTQTKGFLADEFREKIGNRLYGC
CCCHHHHCCHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
DTCQLVCPENKKKDFHLHPEFEPDPEAAKPKLIPLLQVSNREFKEKFGAMAGSWRGKKPI
CCEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHCCCCCCCCC
QRNAILALAHYKDRTAVPHLLRLLKEDSRPVIRGTAAWALGKIGDVSAKPYLEEARQTET
CCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEECHHHHHHCCCCCCCCCHHHHHHHCCCC
DSDVVAEIEKGLKLLTEVKE
CHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIVSLKQEVIEYSRSIGIDKIGFASADPFVELKERLRRQQELGYQSGFEEPDIEKRTNP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCC
SLLLPEAKSIIAIALAYPSKMKDAPRGTKNERRGLFCRASWGKDYHDVLRERLRQLEEFL
CEECCCCHHHEEEEECCCHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
LAKVPHARVRSMVDTGELADRAVAERAGIGWSGKNCSIITPEFGSYVYLGEMITTIPFPP
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEHHHHHHHCCCCC
DEPIENRCGTCTKCIDACPTGALVQGGQLNAQRCISFLTQTKGFLADEFREKIGNRLYGC
CCCHHHHCCHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
DTCQLVCPENKKKDFHLHPEFEPDPEAAKPKLIPLLQVSNREFKEKFGAMAGSWRGKKPI
CCEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHCCCCCCCCC
QRNAILALAHYKDRTAVPHLLRLLKEDSRPVIRGTAAWALGKIGDVSAKPYLEEARQTET
CCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEECHHHHHHCCCCCCCCCHHHHHHHCCCC
DSDVVAEIEKGLKLLTEVKE
CHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]