Definition Geobacillus thermodenitrificans NG80-2 chromosome, complete genome.
Accession NC_009328
Length 3,550,319

Click here to switch to the map view.

The map label for this gene is ygxA [H]

Identifier: 138894166

GI number: 138894166

Start: 546182

End: 547060

Strand: Direct

Name: ygxA [H]

Synonym: GTNG_0492

Alternate gene names: 138894166

Gene position: 546182-547060 (Clockwise)

Preceding gene: 138894164

Following gene: 138894168

Centisome position: 15.38

GC content: 43.34

Gene sequence:

>879_bases
ATGGAAGAATTGCTGCGTCCCATTTATCAAGAATGGGCAAGCCGTTGCAATACGCTCGGAATTTTACTGATTGAGAAAAA
TGAGGGACATGAGACGGTGACAGATACGTTTGATGCGTTGTTGCTCGTCATTGTCGATTTGCAAAGTGAGCCATTGTTTT
TAAAGCATTACTCGATTAATGGTGAGAAGGCAGCACTTTATGCAGTGAATGAACAAAAATTAAACGAATGGTTTGTTCTC
GGGTCACATCGAAAGGCCGTCGATTGGGTATTCAATGGAAAAATCGTGTTTGACCGCAATGACTACGTTTGGCAGTTGCG
TCAACGTCTTGAGCAATTTCCTCCTAGGGAACGGCAGCTGAAAATGGGATTGGAATTTGCCAAACTGATTCGTCGTTATA
CTGATGGCAAGGCACTGTTTAGCGCTCGACATTGGCTTGATTCATACAACCATATGATGCACGCCTTGCACCATTTAGCA
CGGTTAACAGTCATCGAGCATGGCCTTTATCCGGAAGTGACGGTATGGAATCAAGTAAAGCAAATGGATGGGCAAATTTA
TAAATTATATGAGGAGTTAGTCGGTAGCGAAGAACCGCTTCCAAAACGACTCGAGCTTCTGTTGCTGGCGAGCGAATTTT
TAATTCATTCTTTTGTGGCACCAGGATCCTCCCATTTATGTGAGGTGCTAAAGCAAAAAGAGGGAGCGTGGAGTATCGAG
GAAATGACCCACCACCCACAGTTTGCCCCCTATTCGGTCGACCTTACCATCATGCTTGAATATTTAGTAGAAAGAAAAGT
GTTAAGTGCGGTAGAGGTACCGACAAATGGGGAAAAAATGTTTGAACGTTATTATACTTTGCAGGAAGAGAAAAACTGA

Upstream 100 bases:

>100_bases
CCAAAAGTGAAAGAAAATATGCTCTCTCCGTCGATTTTTTTGAGGGGGAGAGCTCGGAAGATGTCACAGCTTTACCTGTT
TTCTGTAACGGGAACGATTT

Downstream 100 bases:

>100_bases
TGAGCCTTTCCGTCTGGGCTCCCCTTTGTTTAACCTGTTTCAGAAAGAGGTTCCTCAACTTTGAGGGGGAAGTGTCATTG
TACGGAATCACACCCGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MEELLRPIYQEWASRCNTLGILLIEKNEGHETVTDTFDALLLVIVDLQSEPLFLKHYSINGEKAALYAVNEQKLNEWFVL
GSHRKAVDWVFNGKIVFDRNDYVWQLRQRLEQFPPRERQLKMGLEFAKLIRRYTDGKALFSARHWLDSYNHMMHALHHLA
RLTVIEHGLYPEVTVWNQVKQMDGQIYKLYEELVGSEEPLPKRLELLLLASEFLIHSFVAPGSSHLCEVLKQKEGAWSIE
EMTHHPQFAPYSVDLTIMLEYLVERKVLSAVEVPTNGEKMFERYYTLQEEKN

Sequences:

>Translated_292_residues
MEELLRPIYQEWASRCNTLGILLIEKNEGHETVTDTFDALLLVIVDLQSEPLFLKHYSINGEKAALYAVNEQKLNEWFVL
GSHRKAVDWVFNGKIVFDRNDYVWQLRQRLEQFPPRERQLKMGLEFAKLIRRYTDGKALFSARHWLDSYNHMMHALHHLA
RLTVIEHGLYPEVTVWNQVKQMDGQIYKLYEELVGSEEPLPKRLELLLLASEFLIHSFVAPGSSHLCEVLKQKEGAWSIE
EMTHHPQFAPYSVDLTIMLEYLVERKVLSAVEVPTNGEKMFERYYTLQEEKN
>Mature_292_residues
MEELLRPIYQEWASRCNTLGILLIEKNEGHETVTDTFDALLLVIVDLQSEPLFLKHYSINGEKAALYAVNEQKLNEWFVL
GSHRKAVDWVFNGKIVFDRNDYVWQLRQRLEQFPPRERQLKMGLEFAKLIRRYTDGKALFSARHWLDSYNHMMHALHHLA
RLTVIEHGLYPEVTVWNQVKQMDGQIYKLYEELVGSEEPLPKRLELLLLASEFLIHSFVAPGSSHLCEVLKQKEGAWSIE
EMTHHPQFAPYSVDLTIMLEYLVERKVLSAVEVPTNGEKMFERYYTLQEEKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011991 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34331; Mature: 34331

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELLRPIYQEWASRCNTLGILLIEKNEGHETVTDTFDALLLVIVDLQSEPLFLKHYSIN
CHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC
GEKAALYAVNEQKLNEWFVLGSHRKAVDWVFNGKIVFDRNDYVWQLRQRLEQFPPRERQL
CCCEEEEEECHHHCCCEEEECCCCCEEEEEECCEEEEECCHHHHHHHHHHHHCCCHHHHH
KMGLEFAKLIRRYTDGKALFSARHWLDSYNHMMHALHHLARLTVIEHGLYPEVTVWNQVK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QMDGQIYKLYEELVGSEEPLPKRLELLLLASEFLIHSFVAPGSSHLCEVLKQKEGAWSIE
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH
EMTHHPQFAPYSVDLTIMLEYLVERKVLSAVEVPTNGEKMFERYYTLQEEKN
HHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEELLRPIYQEWASRCNTLGILLIEKNEGHETVTDTFDALLLVIVDLQSEPLFLKHYSIN
CHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC
GEKAALYAVNEQKLNEWFVLGSHRKAVDWVFNGKIVFDRNDYVWQLRQRLEQFPPRERQL
CCCEEEEEECHHHCCCEEEECCCCCEEEEEECCEEEEECCHHHHHHHHHHHHCCCHHHHH
KMGLEFAKLIRRYTDGKALFSARHWLDSYNHMMHALHHLARLTVIEHGLYPEVTVWNQVK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
QMDGQIYKLYEELVGSEEPLPKRLELLLLASEFLIHSFVAPGSSHLCEVLKQKEGAWSIE
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH
EMTHHPQFAPYSVDLTIMLEYLVERKVLSAVEVPTNGEKMFERYYTLQEEKN
HHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377; 1981762 [H]