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The map label for this gene is dppC [H]

Identifier: 138894154

GI number: 138894154

Start: 534736

End: 535635

Strand: Direct

Name: dppC [H]

Synonym: GTNG_0480

Alternate gene names: 138894154

Gene position: 534736-535635 (Clockwise)

Preceding gene: 138894153

Following gene: 138894158

Centisome position: 15.06

GC content: 49.22

Gene sequence:

>900_bases
ATGGCTGAATTAGCGCGCACACCGGCAACGCCACCGACAGCGATTGAGGAAGAAAGAACTGTTTCATTATGGGGAGAAGC
TTGGCAACGGTTTCGAAAGAATAAAATCGCGCTTGTTGGGACAGGGATCGTCTTATTTTTTATTATGATCGCCATCTTGG
CGCCCTGGTTGGCGCCGTATGACTACAAAGAACAGCAGTTGGCTGAGCGGCTGCAACCGCCTTCGAGTGAGCACTGGTTT
GGAACGGATGATTTTGGCCGCGATATTTTCTCCCGTGTGATTTATGGAGCGCGCATTTCATTATGGGTAGGGTTTTTCTC
TGTGCTCGGGTCGATCGTTGTCGGCTCATTGCTTGGCATTATCGCTGGCTACTACGGCAGATGGATCGATGGAGTGATTT
CACGACTATTTGATATTATGCTAGCATTTCCGAGCATTTTATTAGCGATCGGCATCGTTGCGGTGCTCGGCCCGTCTTTG
CAAAATGCCCTTATTGCCATTGCTGTCATTAATGTGCCGAACTTCGGCCGTTTAATCCGTTCTCGCGTGTTAAGCATTAA
GCAGGAGGAATACATTATGGCGGCAAAAGCAATCGGTATGAGCGATTGGCGCATTTTGTTTCACCATATTTTGCCCAACA
GCCTAGCGCCGATTATTGTTCAAGGGACATTGGCGATCGCTACTGCCATTATCGAAGCGGCGGCACTTGGCTTTTTAGGA
TTAGGGGCACAGCCGCCAAACCCAGAGTGGGGGAAAATGTTGTCCGATGCGAAAGATTTTTTAACGCAAGCACCGTGGAC
GATGATTTTTCCAGGACTGGCGATTATGTTAACCGTGCTCGGTTTTAACTTAATGGGTGACGGGCTGCGCGATGCGCTTG
ACCCACGGATGAAAAGCTAA

Upstream 100 bases:

>100_bases
ATTGCTGCCATTTTCATTTTCATTAATTTAATCGTTGACTTGCTTTATGCAGCGATTGATCCGCGTATTAAGTACAATTA
ACGAAGAGGGAGGCGTGTGT

Downstream 100 bases:

>100_bases
AACAGGCGGCCCGCTATGAGCGGCCGCCTGTTGACTTTTCGAGCTGTTTCGTCAGCTCCTCATCATAATGGTAATGGTGG
AAGCTATCAATTAACTTATC

Product: peptide ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MAELARTPATPPTAIEEERTVSLWGEAWQRFRKNKIALVGTGIVLFFIMIAILAPWLAPYDYKEQQLAERLQPPSSEHWF
GTDDFGRDIFSRVIYGARISLWVGFFSVLGSIVVGSLLGIIAGYYGRWIDGVISRLFDIMLAFPSILLAIGIVAVLGPSL
QNALIAIAVINVPNFGRLIRSRVLSIKQEEYIMAAKAIGMSDWRILFHHILPNSLAPIIVQGTLAIATAIIEAAALGFLG
LGAQPPNPEWGKMLSDAKDFLTQAPWTMIFPGLAIMLTVLGFNLMGDGLRDALDPRMKS

Sequences:

>Translated_299_residues
MAELARTPATPPTAIEEERTVSLWGEAWQRFRKNKIALVGTGIVLFFIMIAILAPWLAPYDYKEQQLAERLQPPSSEHWF
GTDDFGRDIFSRVIYGARISLWVGFFSVLGSIVVGSLLGIIAGYYGRWIDGVISRLFDIMLAFPSILLAIGIVAVLGPSL
QNALIAIAVINVPNFGRLIRSRVLSIKQEEYIMAAKAIGMSDWRILFHHILPNSLAPIIVQGTLAIATAIIEAAALGFLG
LGAQPPNPEWGKMLSDAKDFLTQAPWTMIFPGLAIMLTVLGFNLMGDGLRDALDPRMKS
>Mature_298_residues
AELARTPATPPTAIEEERTVSLWGEAWQRFRKNKIALVGTGIVLFFIMIAILAPWLAPYDYKEQQLAERLQPPSSEHWFG
TDDFGRDIFSRVIYGARISLWVGFFSVLGSIVVGSLLGIIAGYYGRWIDGVISRLFDIMLAFPSILLAIGIVAVLGPSLQ
NALIAIAVINVPNFGRLIRSRVLSIKQEEYIMAAKAIGMSDWRILFHHILPNSLAPIIVQGTLAIATAIIEAAALGFLGL
GAQPPNPEWGKMLSDAKDFLTQAPWTMIFPGLAIMLTVLGFNLMGDGLRDALDPRMKS

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=285, Percent_Identity=49.4736842105263, Blast_Score=289, Evalue=2e-79,
Organism=Escherichia coli, GI1787760, Length=289, Percent_Identity=43.598615916955, Blast_Score=250, Evalue=7e-68,
Organism=Escherichia coli, GI1789964, Length=280, Percent_Identity=51.0714285714286, Blast_Score=240, Evalue=1e-64,
Organism=Escherichia coli, GI1787549, Length=284, Percent_Identity=39.4366197183099, Blast_Score=194, Evalue=5e-51,
Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=37.2950819672131, Blast_Score=176, Evalue=1e-45,
Organism=Escherichia coli, GI1787498, Length=277, Percent_Identity=37.9061371841155, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=33.920704845815, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32835; Mature: 32704

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELARTPATPPTAIEEERTVSLWGEAWQRFRKNKIALVGTGIVLFFIMIAILAPWLAPY
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHCCC
DYKEQQLAERLQPPSSEHWFGTDDFGRDIFSRVIYGARISLWVGFFSVLGSIVVGSLLGI
CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGYYGRWIDGVISRLFDIMLAFPSILLAIGIVAVLGPSLQNALIAIAVINVPNFGRLIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEECCCCHHHHHH
SRVLSIKQEEYIMAAKAIGMSDWRILFHHILPNSLAPIIVQGTLAIATAIIEAAALGFLG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGAQPPNPEWGKMLSDAKDFLTQAPWTMIFPGLAIMLTVLGFNLMGDGLRDALDPRMKS
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
>Mature Secondary Structure 
AELARTPATPPTAIEEERTVSLWGEAWQRFRKNKIALVGTGIVLFFIMIAILAPWLAPY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHCCC
DYKEQQLAERLQPPSSEHWFGTDDFGRDIFSRVIYGARISLWVGFFSVLGSIVVGSLLGI
CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGYYGRWIDGVISRLFDIMLAFPSILLAIGIVAVLGPSLQNALIAIAVINVPNFGRLIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEECCCCHHHHHH
SRVLSIKQEEYIMAAKAIGMSDWRILFHHILPNSLAPIIVQGTLAIATAIIEAAALGFLG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGAQPPNPEWGKMLSDAKDFLTQAPWTMIFPGLAIMLTVLGFNLMGDGLRDALDPRMKS
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]